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FFCP PHASE1:Mm9::chr8:93479297..93479314,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=109151|HGNC=|UniProt=Q8BIM5|association_with_transcript=-19bp_to_ENSMUST00000169574,uc009msh.1_5end|description=CAGE_peak_5_at_Chd9_5end|id=chr8:93479297..93479314,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.95e-15!63;UBERON:0004121!3.09e-12!102;UBERON:0000924!3.09e-12!102;UBERON:0006601!3.09e-12!102;UBERON:0002346!1.40e-11!71;UBERON:0003075!1.40e-11!71;UBERON:0007284!1.40e-11!71;UBERON:0001017!1.26e-10!73;UBERON:0005743!1.26e-10!73;UBERON:0000153!2.01e-10!94;UBERON:0007811!4.86e-10!86;UBERON:0000073!1.01e-09!75;UBERON:0001016!1.01e-09!75;UBERON:0003056!1.94e-09!49;UBERON:0000955!4.76e-09!50;UBERON:0006238!4.76e-09!50;UBERON:0002616!1.48e-08!49;UBERON:0001049!8.14e-08!52;UBERON:0005068!8.14e-08!52;UBERON:0006241!8.14e-08!52;UBERON:0007135!8.14e-08!52;UBERON:0000020!2.74e-07!12;UBERON:0001032!2.74e-07!12;UBERON:0004456!2.74e-07!12;UBERON:0001444!2.85e-07!11;UBERON:0000970!8.26e-07!9;UBERON:0000019!8.26e-07!9;UBERON:0000047!8.26e-07!9;UBERON:0004088!8.26e-07!9;UBERON:0002104!8.26e-07!9;UBERON:0001456!8.26e-07!9;UBERON:0003072!8.26e-07!9;UBERON:0003071!8.26e-07!9;UBERON:0004128!8.26e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.69e-14,64;UBERON:0003075,4.69e-14,64;UBERON:0007284,4.69e-14,64;UBERON:0004121,7.13e-14,95;UBERON:0000924,7.13e-14,95;UBERON:0006601,7.13e-14,95;UBERON:0010371,8.65e-13,73;UBERON:0001017,3.18e-10,73;UBERON:0001016,1.60e-09,75;UBERON:0003056,1.76e-09,49;UBERON:0000033,2.06e-09,13;UBERON:0010314,4.04e-09,92;UBERON:0000020,6.49e-09,12;UBERON:0001032,6.49e-09,12;UBERON:0004456,6.49e-09,12;UBERON:0001444,6.84e-09,11;UBERON:0000970,2.66e-08,9;UBERON:0000019,2.66e-08,9;UBERON:0000047,2.66e-08,9;UBERON:0010312,2.66e-08,9;UBERON:0004088,2.66e-08,9;UBERON:0002104,2.66e-08,9;UBERON:0001456,2.66e-08,9;UBERON:0003072,2.66e-08,9;UBERON:0004128,2.66e-08,9;UBERON:0003071,2.66e-08,9;UBERON:0000073,6.99e-08,54;UBERON:0000955,7.37e-08,47;UBERON:0006238,7.37e-08,47;UBERON:0002616,2.60e-07,46;UBERON:0001049,2.70e-07,52;UBERON:0005068,2.70e-07,52;UBERON:0006241,2.70e-07,52;UBERON:0007135,2.70e-07,52;UBERON:0005085,9.59e-07,13|phase1_expression=1.44133962394315,0,0,0,0.500895729946347,0.33575854382378,0.467225281191051,0.387369970324729,0,0,0.171217968225505,0,0,0.0874204024189974,0,0.809901069559304,0.699561878128147,0.946386496074713,1.50825876966313,0.42438965179803,0.425216450755349,1.39007331681239,1.04479915655574,0.47997726838022,0,0,0,0.215471232685889,0.760093677825496,0,0,0,0,0,0.866554859253824,0.498703936075477,1.02084678131185,1.25559489221072,0,0,0,0.683045484958446,0.485510353031154,0.251793635951155,0.506884656097573,0,1.56478268869608,1.30815093828268,0,1.55543919259427,0,1.43752564364972,1.00669563634642,0,0,0.257259436035947,0,0.515672092277442,0.606949382578793,0,1.26766280701236,0,0,0,0,0,0.599200221036809,0.768436610643109,1.65903379693564,0.675029691658453,0.630974884054146,0.571301968807607,0.441737081903227,0.734944795289724,0.670918297127655,0.919218786610021,4.40463523997555,1.14918604276669,1.99688493233117,0.263772575460388,0.365950574409639,1.56274011167028,1.11673199600552,2.25105044012672,1.06958773443767,1.17851434189467,1.70846016958924,0.745597783301202,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,1.54927761754349,1.28326477414318,2.54805239706646,0,0,0,0,0.68510327831436,2.07150306917737,1.03909497345377,0.346970653532272,0,0.461230994512117,0.60289056221049,1.29347577849275,0.251333182659351,0,2.02439099687876,3.5384422077995,0.323533699894818,0.662524555381181,1.45462575940567,0,4.39171195517321,3.77004072264219,0.510914110417183,2.15667224110656,1.19980546198682,2.1601938602421,3.89455662452539,2.74500361691176,0.753926112677186,2.25971616249959,1.02286182932132,3.32460871295296,1.1356888414743,0.712875546952214,1.24406970610093,1.51633655060205,1.47309299120532,2.99277018814219,3.21862946206862,5.22180176435513,6.0281927134286,4.96666443804693,7.17436833595159,3.46696380870997,4.65666067330228,0.431135985865684,1.32374256117473,1.23165786914764,0.657587197282725,1.11218899690239,1.0447564995665,0.61734640922383,0.796137067273973,2.80885274925294,3.08817488537658,3.40996199274711,1.03562886267751,2.11073453982987,0.900310307305074,1.42046841351126,0.393528463494808,0.462801338662135,0.465067889500816,0.804820204198858,0.350296027101508,0.822799249567402,0.656669856316381,1.05389452409612,0.292399974850665,0.878200461164203,0.939444931322602,3.36463917702604,1.02904612379284,0,0,0.426576501070468,1.62565670302307,0.644337306610467,0.80673409849337,0.444756087689741,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0.189667900953082,0.799739588268102,1.1270773567308,2.44381593414377,1.74557238450863,1.33258057791605,0.69560190836683,1.47610147979602,1.56998727841375,0.740382983530803,0,0.667380422864376,0.393117990226406,0.6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|EntrezGene=109151
|HGNC=
|UniProt=Q8BIM5
|association_with_transcript=-19bp_to_ENSMUST00000169574,uc009msh.1_5end
|description=CAGE_peak_5_at_Chd9_5end
|id=chr8:93479297..93479314,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!4.95e-15!63;UBERON:0004121!3.09e-12!102;UBERON:0000924!3.09e-12!102;UBERON:0006601!3.09e-12!102;UBERON:0002346!1.40e-11!71;UBERON:0003075!1.40e-11!71;UBERON:0007284!1.40e-11!71;UBERON:0001017!1.26e-10!73;UBERON:0005743!1.26e-10!73;UBERON:0000153!2.01e-10!94;UBERON:0007811!4.86e-10!86;UBERON:0000073!1.01e-09!75;UBERON:0001016!1.01e-09!75;UBERON:0003056!1.94e-09!49;UBERON:0000955!4.76e-09!50;UBERON:0006238!4.76e-09!50;UBERON:0002616!1.48e-08!49;UBERON:0001049!8.14e-08!52;UBERON:0005068!8.14e-08!52;UBERON:0006241!8.14e-08!52;UBERON:0007135!8.14e-08!52;UBERON:0000020!2.74e-07!12;UBERON:0001032!2.74e-07!12;UBERON:0004456!2.74e-07!12;UBERON:0001444!2.85e-07!11;UBERON:0000970!8.26e-07!9;UBERON:0000019!8.26e-07!9;UBERON:0000047!8.26e-07!9;UBERON:0004088!8.26e-07!9;UBERON:0002104!8.26e-07!9;UBERON:0001456!8.26e-07!9;UBERON:0003072!8.26e-07!9;UBERON:0003071!8.26e-07!9;UBERON:0004128!8.26e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.69e-14,64;UBERON:0003075,4.69e-14,64;UBERON:0007284,4.69e-14,64;UBERON:0004121,7.13e-14,95;UBERON:0000924,7.13e-14,95;UBERON:0006601,7.13e-14,95;UBERON:0010371,8.65e-13,73;UBERON:0001017,3.18e-10,73;UBERON:0001016,1.60e-09,75;UBERON:0003056,1.76e-09,49;UBERON:0000033,2.06e-09,13;UBERON:0010314,4.04e-09,92;UBERON:0000020,6.49e-09,12;UBERON:0001032,6.49e-09,12;UBERON:0004456,6.49e-09,12;UBERON:0001444,6.84e-09,11;UBERON:0000970,2.66e-08,9;UBERON:0000019,2.66e-08,9;UBERON:0000047,2.66e-08,9;UBERON:0010312,2.66e-08,9;UBERON:0004088,2.66e-08,9;UBERON:0002104,2.66e-08,9;UBERON:0001456,2.66e-08,9;UBERON:0003072,2.66e-08,9;UBERON:0004128,2.66e-08,9;UBERON:0003071,2.66e-08,9;UBERON:0000073,6.99e-08,54;UBERON:0000955,7.37e-08,47;UBERON:0006238,7.37e-08,47;UBERON:0002616,2.60e-07,46;UBERON:0001049,2.70e-07,52;UBERON:0005068,2.70e-07,52;UBERON:0006241,2.70e-07,52;UBERON:0007135,2.70e-07,52;UBERON:0005085,9.59e-07,13
|phase1_expression=1.44133962394315,0,0,0,0.500895729946347,0.33575854382378,0.467225281191051,0.387369970324729,0,0,0.171217968225505,0,0,0.0874204024189974,0,0.809901069559304,0.699561878128147,0.946386496074713,1.50825876966313,0.42438965179803,0.425216450755349,1.39007331681239,1.04479915655574,0.47997726838022,0,0,0,0.215471232685889,0.760093677825496,0,0,0,0,0,0.866554859253824,0.498703936075477,1.02084678131185,1.25559489221072,0,0,0,0.683045484958446,0.485510353031154,0.251793635951155,0.506884656097573,0,1.56478268869608,1.30815093828268,0,1.55543919259427,0,1.43752564364972,1.00669563634642,0,0,0.257259436035947,0,0.515672092277442,0.606949382578793,0,1.26766280701236,0,0,0,0,0,0.599200221036809,0.768436610643109,1.65903379693564,0.675029691658453,0.630974884054146,0.571301968807607,0.441737081903227,0.734944795289724,0.670918297127655,0.919218786610021,4.40463523997555,1.14918604276669,1.99688493233117,0.263772575460388,0.365950574409639,1.56274011167028,1.11673199600552,2.25105044012672,1.06958773443767,1.17851434189467,1.70846016958924,0.745597783301202,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,1.54927761754349,1.28326477414318,2.54805239706646,0,0,0,0,0.68510327831436,2.07150306917737,1.03909497345377,0.346970653532272,0,0.461230994512117,0.60289056221049,1.29347577849275,0.251333182659351,0,2.02439099687876,3.5384422077995,0.323533699894818,0.662524555381181,1.45462575940567,0,4.39171195517321,3.77004072264219,0.510914110417183,2.15667224110656,1.19980546198682,2.1601938602421,3.89455662452539,2.74500361691176,0.753926112677186,2.25971616249959,1.02286182932132,3.32460871295296,1.1356888414743,0.712875546952214,1.24406970610093,1.51633655060205,1.47309299120532,2.99277018814219,3.21862946206862,5.22180176435513,6.0281927134286,4.96666443804693,7.17436833595159,3.46696380870997,4.65666067330228,0.431135985865684,1.32374256117473,1.23165786914764,0.657587197282725,1.11218899690239,1.0447564995665,0.61734640922383,0.796137067273973,2.80885274925294,3.08817488537658,3.40996199274711,1.03562886267751,2.11073453982987,0.900310307305074,1.42046841351126,0.393528463494808,0.462801338662135,0.465067889500816,0.804820204198858,0.350296027101508,0.822799249567402,0.656669856316381,1.05389452409612,0.292399974850665,0.878200461164203,0.939444931322602,3.36463917702604,1.02904612379284,0,0,0.426576501070468,1.62565670302307,0.644337306610467,0.80673409849337,0.444756087689741,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0.189667900953082,0.799739588268102,1.1270773567308,2.44381593414377,1.74557238450863,1.33258057791605,0.69560190836683,1.47610147979602,1.56998727841375,0.740382983530803,0,0.667380422864376,0.393117990226406,0.674586337154561,0.405720242777006,0.482354319504834,0,0,0.162135226775035,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0.717589654087649,0,1.10851914099963,0.947457058852424,2.28150967018836,0.848725428875941,1.64283173801951,1.84256883185997,0.476087281772027,0.780534591431195,0.788175720530955,0.44292937929755,0.637819074629948,1.14704320301017,0.863424909329478,0.433947175744535,3.01582567878545,0.54390568381871,0.491764273019036,0.551873492609465,3.37156238974363,3.04750385139728,0.655739781506702,2.27223834483936,2.2085575359138,1.95219372148319,2.58508077279359,0.716906393857656,1.78238939265915,2.26461224631066,1.61924280669958,1.75353514746787,0.790575555893047,3.53453448063988,0.99358059645788,0,1.46598263418218,1.64970122972535,1.32745138339963,1.21390318077491,0.604647113929502,0.565815239267694,0,0.307435147943927,0,0,1.06949213515416,0.316036757935816,0,0,1.70219802876894,2.52085531643834,1.4229455216103,0.857348140126369,1.41872186913819,1.42695054081656,1.48094118541909,0.304464949114599,0.469343416127421,0,0.661585194164886,0.49465875882444,1.13025098687134,0.904693873922338,0.596861720015682,1.14898629821543,0.874442509889552,3.70850604021019,1.36696704638282,0.206386867963223,0.925972636848558,0.941842285023455,1.0935538217682,0.686334519619568,2.88963330989554,3.91864066506242,4.42239916174156,0.954670618015114,0.949007980743406,0.406638934253697,1.51207477150522,1.46361807210128,1.09181281873089,1.21377911746339,0.991841468704031,0,0.129614973291793,1.86401793926078,0,0.448549638131936,0.496375471371293,0.777804753376191,0.129159823477731,1.35164900392623,1.29092962510329,0.651021924219751,0,0.241584120826006,0.288030006257865,1.89606672376907,1.21635129174099,1.02710957164827,1.16928740680016,1.25318686967237,0.39736270956253,1.20195449519969,0.443068581523732,0.807731599585181,0.838274873204998,0.302478555410522,0.38983152295901,0.384847366561318,0.584384510907845,1.36038230169127,0,0,0,1.54551675225752,0.187682475451182,1.83151624267265,0.428736758158132,0,0.564751842617067,2.76195141904306,2.29158205375759,1.03111909406213,0.685082519770642,1.5107877947794,0.675022500231806,1.80128481289688,4.07828168085784,1.55328093525546,0.93408612825759,2.39414924040619,1.70733605754134,0.729320151204882,0.628839487883947,0.183843508450014,2.00022055021454,0.824140228955577,1.60459604795908,1.01078884705519,2.02783439912192,1.13175804831646,0.842773567228942,1.21647789569252,0.861532034334199,1.42888107384922,0.811190281613988,0.77163688185482,1.64834360321323,1.03039244094078,0.342869252385415,0.887379030796687,0.715308569841963,1.74415699958794,1.03520318456864,0.676916863133412,1.64635175585495,0.526139422875686,1.49384525230448,1.12228454331548,0.830445126869219,0.689531376628944,0.409231043169689,0.77468420592983,1.15743966588685,0.999242311751784,0.701794825336225,1.28922632428979,0.765153328275374,1.32354851471709,0.695603506861264
|short_description=p5@Chd9
}}

Revision as of 16:26, 14 September 2013

Short description:p5@Chd9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Chd9_5end
Coexpression cluster:NA
Association with transcript: -19bp_to_ENSMUST00000169574, uc009msh.1_5end
EntrezGene:Chd9
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p5@Chd9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.16
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C62.99
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D46.03
eyeball, neonate N00.CNhs11207.633-15C64.97
eyeball, neonate N01.CNhs11140.1532-43E77.17
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.42
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm4.69e-1464
neural plate4.69e-1464
presumptive neural plate4.69e-1464
ectoderm-derived structure7.13e-1495
ectoderm7.13e-1495
presumptive ectoderm7.13e-1495
ecto-epithelium8.65e-1373
central nervous system3.18e-1073
nervous system1.60e-0975
pre-chordal neural plate1.76e-0949
head2.06e-0913
structure with developmental contribution from neural crest4.04e-0992
sense organ6.49e-0912
sensory system6.49e-0912
entire sense organ system6.49e-0912
subdivision of head6.84e-0911
eye2.66e-089
camera-type eye2.66e-089
simple eye2.66e-089
immature eye2.66e-089
ocular region2.66e-089
visual system2.66e-089
face2.66e-089
optic cup2.66e-089
optic vesicle2.66e-089
eye primordium2.66e-089
regional part of nervous system6.99e-0854
brain7.37e-0847
future brain7.37e-0847
regional part of brain2.60e-0746
neural tube2.70e-0752
neural rod2.70e-0752
future spinal cord2.70e-0752
neural keel2.70e-0752
ectodermal placode9.59e-0713







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