FFCP PHASE1:Mm9::chr7:51733076..51733120,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=45|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:51733076..51733120,+|id=chr7:51733076..51733120,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!4.86e-11!18;UBERON:0000948!4.86e-11!18;UBERON:0005498!4.86e-11!18;UBERON:0004140!4.86e-11!18;UBERON:0009881!4.86e-11!18;UBERON:0004141!4.86e-11!18;UBERON:0003084!4.86e-11!18;UBERON:0007005!4.86e-11!18;UBERON:0004139!4.86e-11!18;UBERON:0004291!4.86e-11!18;UBERON:0004535!9.99e-08!23;UBERON:0001009!9.99e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.72e-15,18;UBERON:0000948,2.72e-15,18;UBERON:0005498,2.72e-15,18;UBERON:0004140,2.72e-15,18;UBERON:0009881,2.72e-15,18;UBERON:0004141,2.72e-15,18;UBERON:0003084,2.72e-15,18;UBERON:0007005,2.72e-15,18;UBERON:0004139,2.72e-15,18;UBERON:0004291,2.72e-15,18;UBERON:0004535,7.18e-11,23;UBERON:0001009,7.18e-11,23;UBERON:0000026,3.33e-08,12;UBERON:0004708,3.33e-08,12;UBERON:0002101,3.33e-08,12;UBERON:0004357,3.33e-08,12;UBERON:0004347,3.33e-08,12;UBERON:0005732,3.33e-08,12;UBERON:0005733,3.33e-08,12;UBERON:0003102,4.79e-08,22;UBERON:0010707,2.20e-07,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913396434936424,0.230615497256059,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0,12.9413479957927,16.3422723660691,5.33362778448744,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0.497627882440372,0,0.420883711772948,0.260240885925407,0.459804208866946,0.900310649026746,2.71268672104287,0.95251098811859,0.384341160854549,0.468508622798644,1.03481348295606,0,3.02569728268511,2.63926686245923,1.53437012699302,3.05851974148158,7.3132954969655,4.7329891373827,0,0,0,0,59.030845172618,74.5792870739886,43.7550809350266,64.3945680791772,78.3121642354667,57.3873659941047,55.1105449058467,28.16870714696,48.8079131094768,25.013097186849,23.6401148273897,6.24229833503089,6.72519942156529,5.26920276698522,3.35516046900929,0,0,0,0,0,0.464473343720877,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0,0,0,0,0,0,0.500535317148282,0.589676985339609,0,0.202860121388503,0,0,0.863088412352432,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,3.60033682363921,2.28150967018836,1.69745085775188,2.58159273117352,2.34508760418542,2.85652369063216,1.95133647857799,1.10344600874334,1.32878813789265,0.159454768657487,1.3109065177259,0.690739927463582,0.433947175744535,0,0,0.491764273019036,2.20749397043786,0,0.117211686592203,0,12.3710754330143,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0.242780636154981,1.209294227859,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0.23467170806371,0,0,2.14352128823924,3.39075296061402,1.14594557363496,0.358117032009409,0.164140899745061,0,0,0,0,0,0.376736914009382,0.136694227721025,0,0,0,0,0.954670618015114,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0.26175594198403,0.129614973291793,1.86401793926078,0,0,0.165458490457098,0,0,0,0,0.2604087696879,0,0.241584120826006,2.30424005006292,0,0.202725215290164,0.308132871494482,0.51968329191118,0.358053391334963,0.596044064343795,0,0.443068581523732,0.302899349844443,0,0,0.0974578807397524,0,0,7.48210265930198,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.830298780673413,0.399024873401031,2.90247129782028,9.48116196566347,0.419226325255965,0.183843508450014,6.22290837844523,4.12070114477788,6.73930340142812,4.04315538822076,3.29523089857312,4.90428487603798,4.30750934361459,4.67383612555546,4.07791829584854,6.66811167796303,2.54945517078682,2.31491064556446,5.76920261124629,3.38557516309114,9.25746981440622,6.03417740941747,4.29185141905178,5.66851024866081,3.67026583619789,4.99226186560891,5.12198324043763,4.47218509444333,4.88894809845102,5.61142271657738,4.62676570684279,3.54616136552028,3.27384834535751,2.63392630016142,9.45242393807593,2.49810577937946,17.0770074165148,4.72716318906256,22.7633115161924,7.0589254118245,6.4922993973718|short_description=p@chr7:51733076..51733120,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=45 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:51733076..51733120,+ | |||
|id=chr7:51733076..51733120,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!4.86e-11!18;UBERON:0000948!4.86e-11!18;UBERON:0005498!4.86e-11!18;UBERON:0004140!4.86e-11!18;UBERON:0009881!4.86e-11!18;UBERON:0004141!4.86e-11!18;UBERON:0003084!4.86e-11!18;UBERON:0007005!4.86e-11!18;UBERON:0004139!4.86e-11!18;UBERON:0004291!4.86e-11!18;UBERON:0004535!9.99e-08!23;UBERON:0001009!9.99e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.72e-15,18;UBERON:0000948,2.72e-15,18;UBERON:0005498,2.72e-15,18;UBERON:0004140,2.72e-15,18;UBERON:0009881,2.72e-15,18;UBERON:0004141,2.72e-15,18;UBERON:0003084,2.72e-15,18;UBERON:0007005,2.72e-15,18;UBERON:0004139,2.72e-15,18;UBERON:0004291,2.72e-15,18;UBERON:0004535,7.18e-11,23;UBERON:0001009,7.18e-11,23;UBERON:0000026,3.33e-08,12;UBERON:0004708,3.33e-08,12;UBERON:0002101,3.33e-08,12;UBERON:0004357,3.33e-08,12;UBERON:0004347,3.33e-08,12;UBERON:0005732,3.33e-08,12;UBERON:0005733,3.33e-08,12;UBERON:0003102,4.79e-08,22;UBERON:0010707,2.20e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913396434936424,0.230615497256059,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0,12.9413479957927,16.3422723660691,5.33362778448744,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0.497627882440372,0,0.420883711772948,0.260240885925407,0.459804208866946,0.900310649026746,2.71268672104287,0.95251098811859,0.384341160854549,0.468508622798644,1.03481348295606,0,3.02569728268511,2.63926686245923,1.53437012699302,3.05851974148158,7.3132954969655,4.7329891373827,0,0,0,0,59.030845172618,74.5792870739886,43.7550809350266,64.3945680791772,78.3121642354667,57.3873659941047,55.1105449058467,28.16870714696,48.8079131094768,25.013097186849,23.6401148273897,6.24229833503089,6.72519942156529,5.26920276698522,3.35516046900929,0,0,0,0,0,0.464473343720877,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0,0,0,0,0,0,0.500535317148282,0.589676985339609,0,0.202860121388503,0,0,0.863088412352432,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,3.60033682363921,2.28150967018836,1.69745085775188,2.58159273117352,2.34508760418542,2.85652369063216,1.95133647857799,1.10344600874334,1.32878813789265,0.159454768657487,1.3109065177259,0.690739927463582,0.433947175744535,0,0,0.491764273019036,2.20749397043786,0,0.117211686592203,0,12.3710754330143,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0.242780636154981,1.209294227859,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0.23467170806371,0,0,2.14352128823924,3.39075296061402,1.14594557363496,0.358117032009409,0.164140899745061,0,0,0,0,0,0.376736914009382,0.136694227721025,0,0,0,0,0.954670618015114,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0.26175594198403,0.129614973291793,1.86401793926078,0,0,0.165458490457098,0,0,0,0,0.2604087696879,0,0.241584120826006,2.30424005006292,0,0.202725215290164,0.308132871494482,0.51968329191118,0.358053391334963,0.596044064343795,0,0.443068581523732,0.302899349844443,0,0,0.0974578807397524,0,0,7.48210265930198,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.830298780673413,0.399024873401031,2.90247129782028,9.48116196566347,0.419226325255965,0.183843508450014,6.22290837844523,4.12070114477788,6.73930340142812,4.04315538822076,3.29523089857312,4.90428487603798,4.30750934361459,4.67383612555546,4.07791829584854,6.66811167796303,2.54945517078682,2.31491064556446,5.76920261124629,3.38557516309114,9.25746981440622,6.03417740941747,4.29185141905178,5.66851024866081,3.67026583619789,4.99226186560891,5.12198324043763,4.47218509444333,4.88894809845102,5.61142271657738,4.62676570684279,3.54616136552028,3.27384834535751,2.63392630016142,9.45242393807593,2.49810577937946,17.0770074165148,4.72716318906256,22.7633115161924,7.0589254118245,6.4922993973718 | |||
|short_description=p@chr7:51733076..51733120,+ | |||
}} |
Revision as of 13:37, 14 September 2013
Short description: | p@chr7:51733076..51733120, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:51733076..51733120, + |
Coexpression cluster: | MCL_coexpression_mm9:45 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.72e-15 | 18 |
heart | 2.72e-15 | 18 |
primitive heart tube | 2.72e-15 | 18 |
primary heart field | 2.72e-15 | 18 |
anterior lateral plate mesoderm | 2.72e-15 | 18 |
heart tube | 2.72e-15 | 18 |
heart primordium | 2.72e-15 | 18 |
cardiac mesoderm | 2.72e-15 | 18 |
cardiogenic plate | 2.72e-15 | 18 |
heart rudiment | 2.72e-15 | 18 |
cardiovascular system | 7.18e-11 | 23 |
circulatory system | 7.18e-11 | 23 |
appendage | 3.33e-08 | 12 |
paired limb/fin | 3.33e-08 | 12 |
limb | 3.33e-08 | 12 |
paired limb/fin bud | 3.33e-08 | 12 |
limb bud | 3.33e-08 | 12 |
limb/fin field | 3.33e-08 | 12 |
limb field | 3.33e-08 | 12 |
surface structure | 4.79e-08 | 22 |
appendage girdle complex | 2.20e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.