Personal tools

FFCP PHASE1:Mm9::chr1:129101924..129101982,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=107895|HGNC=|UniProt=Q8R4G6,Q059T5|association_with_transcript=361bp_to_ENSMUST00000038361,NM_145128,uc007ckp.1,uc007ckq.1,uc007ckr.1_5end|description=CAGE_peak_3_at_Mgat5_5end|id=chr1:129101924..129101982,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000064!9.18e-12!99;UBERON:0000344!6.76e-10!15;UBERON:0001242!7.90e-09!13;UBERON:0000060!7.90e-09!13;UBERON:0001262!7.90e-09!13;UBERON:0004786!7.90e-09!13;UBERON:0007811!8.70e-09!86;UBERON:0000153!1.57e-08!94;UBERON:0000160!8.85e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.31e-16,31;UBERON:0000344,5.11e-10,15;UBERON:0001242,6.19e-09,13;UBERON:0001262,6.19e-09,13;UBERON:0004786,6.19e-09,13;UBERON:0005409,7.04e-09,47|phase1_expression=1.44133962394315,5.58360652222978,5.91499011206397,16.9379958331825,17.5313505481222,5.20425742926858,8.1764424208434,18.0772652818207,3.51971805379167,5.61754863172784,2.56826952338257,3.43020283679947,4.28001824828014,3.84649770643589,0,0.404950534779652,0.699561878128147,1.41957974411207,2.19383093769182,1.27316895539409,2.04103896362567,3.47518329203099,1.30599894569468,8.47959840805055,7.79991555628378,4.01962374880514,3.4460959692726,3.66301095566011,13.1116159424898,8.56902441183765,6.20845429834853,0,0,0,12.9983228888074,9.30914014007557,11.8418226632174,1.25559489221072,2.3440060335714,1.0470474879476,2.94115744015507,2.04913645487534,1.94204141212461,2.14024590558481,3.04130793658544,3.30384153891027,0,1.96222640742402,1.5378032791413,2.52758868796568,3.07970127575798,2.87505128729943,1.00669563634642,4.35217285206807,5.04140698713696,0.771778308107841,0.573066879877513,0.515672092277442,3.84401275633236,5.81890077199236,1.26766280701236,0.338844532069132,0.889294796111139,0.449949858640699,0,0.7104801149461,0.299600110518405,0.768436610643109,2.07379224616955,1.62007125998029,1.68259969081106,1.99955689082663,2.20868540951614,1.5923803897944,2.1086003624012,2.75765635983006,3.30347642998166,3.95830748064082,3.68655679814984,4.3522474950964,4.57438218012048,3.64639359389732,2.79182999001381,3.93933827022176,3.36156145108982,3.53554302568401,3.55929201997757,3.16879057903011,0.075726193333184,0.302286240427142,0.579728977403356,0,0,0,0,0,2.24711072210803,0.340860645156116,0,0.35333957451034,0.985903938436763,1.28326477414318,0,0,1.73192832808971,3.80039798212648,1.01104889002957,2.62622923353838,4.14300613835475,1.03909497345377,1.56136794089522,1.52232739156071,0.922461989024234,2.41156224884196,1.52865319276416,0.502666365318702,0.741584903203122,1.3013942122792,0.884610551949874,0.323533699894818,0.662524555381181,2.42437626567611,7.45567044872489,6.73395833126558,4.39838084308256,9.45191104271788,4.91242010474273,4.19931911695385,4.57452817463033,4.04434726393021,1.83000241127451,1.38219787324151,2.60736480288415,3.06858548796397,3.53239675751252,2.27137768294861,0.916554274652847,2.23932547098167,1.0108910337347,1.68353484709179,1.69156575851515,2.98872735763515,1.98068342785884,2.56198190320716,2.65342346690179,3.45907044769094,2.52994656311268,3.10444044886819,2.80238390812695,1.51284864134255,1.23165786914764,1.7535658594206,2.78047249225598,1.0447564995665,1.85203922767149,2.18937693500343,4.91549231119264,3.60287069960601,3.12579849335152,1.03562886267751,2.34526059981096,2.52086886045421,3.07768156260773,4.32881309844288,3.39387648352232,3.0229412817553,3.21928081679543,1.63471479314037,1.15191894939436,1.47750717671186,0.810688095458557,1.02339991197733,1.3173006917463,0.805238512562231,2.52347938276953,1.3377599609307,15.8601015832223,8.19796756656987,1.70630600428187,1.85789337488351,3.60828891701861,4.84040459096022,4.66993892074228,5.1360919050391,10.9141684155238,5.10566759644434,7.54005626400809,8.55512829776949,7.40863531052657,8.08937467788799,9.94235029423593,11.5501938487533,1.51734320762465,3.54170389090159,5.63538678365402,2.64746726198909,3.10323979468201,1.75339549725796,1.26473074248515,2.36176236767363,2.04098346193787,1.60416313098341,0.296452627087149,0,0.589676985339609,0.449724224769707,0.202860121388503,0,1.52775511068852,1.43848068725405,0.324270453550071,0,2.87536413054709,0.744281895337007,1.5601883655728,0.505157755894224,0.358794827043824,0,1.47802552133284,1.32643988239339,1.30371981153621,1.52770577197669,0.469380496577004,0.837531287209079,0.714130922658041,0.780534591431195,1.89162172927429,1.10732344824387,1.11618338060241,2.45794972073607,2.07221978239075,1.73578870297814,0,0,0,0.827810238914197,4.81651769963376,2.93029216480508,0.491804836130026,0,0.631016438832513,0.390438744296638,1.50796378412959,0.716906393857656,0.445597348164788,0,0.809621403349789,2.04579100537918,1.97643888973262,2.24924921495265,2.2710413633323,1.95872164033981,0.81443479676788,5.1140738121486,1.32745138339963,2.18502572539483,1.81394134178851,1.13163047853539,0.295301892880773,0.922305443831782,1.29214146584111,0.363533729477506,0.712994756769443,0.948110273807448,0,0,10.2131881726136,3.24109969256358,4.52755393239641,2.14337035031592,1.59606210278046,1.78368817602071,3.45552943264454,3.65357938937519,2.11204537257339,1.27099242518292,0.661585194164886,2.4732937941222,0.645857706783622,2.83470747162333,4.77489376012546,6.40149509005739,9.61886760878507,2.22510362412612,1.53783792718067,1.44470807574256,1.48155621895769,0.753473828018764,2.1871076435364,1.14389086603261,7.30907248973578,7.55737842547753,7.46279858543889,0.954670618015114,1.73984796469624,1.42323626988794,1.51207477150522,1.04544148007234,1.74690050996942,0.404593039154462,1.65306911450672,1.30877970992015,4.53652406521275,1.24267862617385,0,2.99033092087958,0.827292452285488,0.777804753376191,0.645799117388655,2.02747350588934,1.5256441023948,1.3020438484395,2.83120229949419,1.20792060413003,0,13.5884781870117,2.43270258348197,2.15693010046137,3.37794139742267,5.54982756569192,8.14593554603186,6.85114062263822,8.71368210330006,9.59181274507402,11.049986964975,10.2842708839577,11.402572046551,13.9507170378478,16.7133970119644,0.453460767230423,1.33191572024439,2.24284641523689,1.00730769818447,3.09103350451505,0.750729901804728,5.49454872801795,1.71494703263253,0,1.6942555278512,3.22227665555024,2.29158205375759,1.3748254587495,2.05524755931193,1.5107877947794,3.37511250115903,2.2516060161211,1.81256963593682,4.14208249401456,1.55681021376265,2.39414924040619,2.21953687480374,1.70174701947806,0.838452650511929,0.551530525350042,2.22246727801615,1.44224540067226,1.28367683836726,1.26348605881899,2.28131369901216,1.88626341386076,0.936415074698824,1.85672941974121,1.55075766180156,1.42888107384922,1.27472758539341,1.15745532278223,1.23625770240992,1.61918812147837,1.71434626192708,1.06485483695602,1.66905332963125,1.74415699958794,1.88218760830661,1.60767754994185,2.19513567447327,1.8414879800649,1.49384525230448,0.561142271657738,1.42362021749009,1.87158516513571,1.63692417267876,1.54936841185966,1.73615949883027,2.49810577937946,3.74290573512653,1.07435527024149,0,0.661774257358546,0.927471342481686|short_description=p3@Mgat5}}
|EntrezGene=107895
|HGNC=
|UniProt=Q8R4G6,Q059T5
|association_with_transcript=361bp_to_ENSMUST00000038361,NM_145128,uc007ckp.1,uc007ckq.1,uc007ckr.1_5end
|description=CAGE_peak_3_at_Mgat5_5end
|id=chr1:129101924..129101982,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000064!9.18e-12!99;UBERON:0000344!6.76e-10!15;UBERON:0001242!7.90e-09!13;UBERON:0000060!7.90e-09!13;UBERON:0001262!7.90e-09!13;UBERON:0004786!7.90e-09!13;UBERON:0007811!8.70e-09!86;UBERON:0000153!1.57e-08!94;UBERON:0000160!8.85e-08!43
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.31e-16,31;UBERON:0000344,5.11e-10,15;UBERON:0001242,6.19e-09,13;UBERON:0001262,6.19e-09,13;UBERON:0004786,6.19e-09,13;UBERON:0005409,7.04e-09,47
|phase1_expression=1.44133962394315,5.58360652222978,5.91499011206397,16.9379958331825,17.5313505481222,5.20425742926858,8.1764424208434,18.0772652818207,3.51971805379167,5.61754863172784,2.56826952338257,3.43020283679947,4.28001824828014,3.84649770643589,0,0.404950534779652,0.699561878128147,1.41957974411207,2.19383093769182,1.27316895539409,2.04103896362567,3.47518329203099,1.30599894569468,8.47959840805055,7.79991555628378,4.01962374880514,3.4460959692726,3.66301095566011,13.1116159424898,8.56902441183765,6.20845429834853,0,0,0,12.9983228888074,9.30914014007557,11.8418226632174,1.25559489221072,2.3440060335714,1.0470474879476,2.94115744015507,2.04913645487534,1.94204141212461,2.14024590558481,3.04130793658544,3.30384153891027,0,1.96222640742402,1.5378032791413,2.52758868796568,3.07970127575798,2.87505128729943,1.00669563634642,4.35217285206807,5.04140698713696,0.771778308107841,0.573066879877513,0.515672092277442,3.84401275633236,5.81890077199236,1.26766280701236,0.338844532069132,0.889294796111139,0.449949858640699,0,0.7104801149461,0.299600110518405,0.768436610643109,2.07379224616955,1.62007125998029,1.68259969081106,1.99955689082663,2.20868540951614,1.5923803897944,2.1086003624012,2.75765635983006,3.30347642998166,3.95830748064082,3.68655679814984,4.3522474950964,4.57438218012048,3.64639359389732,2.79182999001381,3.93933827022176,3.36156145108982,3.53554302568401,3.55929201997757,3.16879057903011,0.075726193333184,0.302286240427142,0.579728977403356,0,0,0,0,0,2.24711072210803,0.340860645156116,0,0.35333957451034,0.985903938436763,1.28326477414318,0,0,1.73192832808971,3.80039798212648,1.01104889002957,2.62622923353838,4.14300613835475,1.03909497345377,1.56136794089522,1.52232739156071,0.922461989024234,2.41156224884196,1.52865319276416,0.502666365318702,0.741584903203122,1.3013942122792,0.884610551949874,0.323533699894818,0.662524555381181,2.42437626567611,7.45567044872489,6.73395833126558,4.39838084308256,9.45191104271788,4.91242010474273,4.19931911695385,4.57452817463033,4.04434726393021,1.83000241127451,1.38219787324151,2.60736480288415,3.06858548796397,3.53239675751252,2.27137768294861,0.916554274652847,2.23932547098167,1.0108910337347,1.68353484709179,1.69156575851515,2.98872735763515,1.98068342785884,2.56198190320716,2.65342346690179,3.45907044769094,2.52994656311268,3.10444044886819,2.80238390812695,1.51284864134255,1.23165786914764,1.7535658594206,2.78047249225598,1.0447564995665,1.85203922767149,2.18937693500343,4.91549231119264,3.60287069960601,3.12579849335152,1.03562886267751,2.34526059981096,2.52086886045421,3.07768156260773,4.32881309844288,3.39387648352232,3.0229412817553,3.21928081679543,1.63471479314037,1.15191894939436,1.47750717671186,0.810688095458557,1.02339991197733,1.3173006917463,0.805238512562231,2.52347938276953,1.3377599609307,15.8601015832223,8.19796756656987,1.70630600428187,1.85789337488351,3.60828891701861,4.84040459096022,4.66993892074228,5.1360919050391,10.9141684155238,5.10566759644434,7.54005626400809,8.55512829776949,7.40863531052657,8.08937467788799,9.94235029423593,11.5501938487533,1.51734320762465,3.54170389090159,5.63538678365402,2.64746726198909,3.10323979468201,1.75339549725796,1.26473074248515,2.36176236767363,2.04098346193787,1.60416313098341,0.296452627087149,0,0.589676985339609,0.449724224769707,0.202860121388503,0,1.52775511068852,1.43848068725405,0.324270453550071,0,2.87536413054709,0.744281895337007,1.5601883655728,0.505157755894224,0.358794827043824,0,1.47802552133284,1.32643988239339,1.30371981153621,1.52770577197669,0.469380496577004,0.837531287209079,0.714130922658041,0.780534591431195,1.89162172927429,1.10732344824387,1.11618338060241,2.45794972073607,2.07221978239075,1.73578870297814,0,0,0,0.827810238914197,4.81651769963376,2.93029216480508,0.491804836130026,0,0.631016438832513,0.390438744296638,1.50796378412959,0.716906393857656,0.445597348164788,0,0.809621403349789,2.04579100537918,1.97643888973262,2.24924921495265,2.2710413633323,1.95872164033981,0.81443479676788,5.1140738121486,1.32745138339963,2.18502572539483,1.81394134178851,1.13163047853539,0.295301892880773,0.922305443831782,1.29214146584111,0.363533729477506,0.712994756769443,0.948110273807448,0,0,10.2131881726136,3.24109969256358,4.52755393239641,2.14337035031592,1.59606210278046,1.78368817602071,3.45552943264454,3.65357938937519,2.11204537257339,1.27099242518292,0.661585194164886,2.4732937941222,0.645857706783622,2.83470747162333,4.77489376012546,6.40149509005739,9.61886760878507,2.22510362412612,1.53783792718067,1.44470807574256,1.48155621895769,0.753473828018764,2.1871076435364,1.14389086603261,7.30907248973578,7.55737842547753,7.46279858543889,0.954670618015114,1.73984796469624,1.42323626988794,1.51207477150522,1.04544148007234,1.74690050996942,0.404593039154462,1.65306911450672,1.30877970992015,4.53652406521275,1.24267862617385,0,2.99033092087958,0.827292452285488,0.777804753376191,0.645799117388655,2.02747350588934,1.5256441023948,1.3020438484395,2.83120229949419,1.20792060413003,0,13.5884781870117,2.43270258348197,2.15693010046137,3.37794139742267,5.54982756569192,8.14593554603186,6.85114062263822,8.71368210330006,9.59181274507402,11.049986964975,10.2842708839577,11.402572046551,13.9507170378478,16.7133970119644,0.453460767230423,1.33191572024439,2.24284641523689,1.00730769818447,3.09103350451505,0.750729901804728,5.49454872801795,1.71494703263253,0,1.6942555278512,3.22227665555024,2.29158205375759,1.3748254587495,2.05524755931193,1.5107877947794,3.37511250115903,2.2516060161211,1.81256963593682,4.14208249401456,1.55681021376265,2.39414924040619,2.21953687480374,1.70174701947806,0.838452650511929,0.551530525350042,2.22246727801615,1.44224540067226,1.28367683836726,1.26348605881899,2.28131369901216,1.88626341386076,0.936415074698824,1.85672941974121,1.55075766180156,1.42888107384922,1.27472758539341,1.15745532278223,1.23625770240992,1.61918812147837,1.71434626192708,1.06485483695602,1.66905332963125,1.74415699958794,1.88218760830661,1.60767754994185,2.19513567447327,1.8414879800649,1.49384525230448,0.561142271657738,1.42362021749009,1.87158516513571,1.63692417267876,1.54936841185966,1.73615949883027,2.49810577937946,3.74290573512653,1.07435527024149,0,0.661774257358546,0.927471342481686
|short_description=p3@Mgat5
}}

Revision as of 18:41, 13 September 2013

Short description:p3@Mgat5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Mgat5_5end
Coexpression cluster:NA
Association with transcript: 361bp_to_ENSMUST00000038361, NM_145128, uc007ckp.1, uc007ckq.1, uc007ckr.1_5end
EntrezGene:Mgat5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Mgat5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.94
CD326+ enterocyte, pool2.CNhs13197.11849-124I417.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.18
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E918.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.43
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.28
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.85
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.80
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I23.66
Ileum epithelium, pool1.CNhs13199.10252-104B913.11
Ileum epithelium, pool2.CNhs13232.10253-104C18.57
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I24.40
colon, adult.CNhs10468.36-18H79.45
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.91
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.57
corpora quadrigemina, adult.CNhs10501.16-22A44.04
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.65
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C63.39
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I315.86
intestine, adult.CNhs10496.178-9A38.20
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D83.61
intestine, embryo E16.CNhs10585.463-22H44.84
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F75.14
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E95.11
intestine, neonate N06.CNhs11102.688-20B87.54
intestine, neonate N07.CNhs11095.720-20F28.56
intestine, neonate N10.CNhs11098.755-23A57.41
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E39.94
intestine, neonate N30.CNhs11131.1384-42G111.55
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F83.54
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C73.10
kidney, neonate N00.CNhs11214.646-21G71.75
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C24.82
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G65.11
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G810.21
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C74.53
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H32.83
skin, neonate N06.CNhs11097.693-20I54.77
skin, neonate N10.CNhs11108.762-6C46.40
small intestine, neonate N16.CNhs11114.790-21I19.62
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.46
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I14.54
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.99
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B513.59
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I22.16
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C15.55
thymus, embryo E18.CNhs10595.1273-19G48.15
thymus, neonate N02.CNhs11181.1541-43F86.85
thymus, neonate N03.CNhs11137.2104-43C78.71
thymus, neonate N06.CNhs11197.681-26C49.59
thymus, neonate N07.CNhs11211.713-19D311.05
thymus, neonate N10.CNhs11194.748-24E410.28
thymus, neonate N20.CNhs11186.820-7A211.40
thymus, neonate N25.CNhs11125.1362-25G713.95
thymus, neonate N30.CNhs11132.1393-42G216.71
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E55.49
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine3.31e-1631
mucosa5.11e-1015
intestinal mucosa6.19e-0913
wall of intestine6.19e-0913
gastrointestinal system mucosa6.19e-0913
gastrointestinal system7.04e-0947







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:129101924..129101982,%2B&oldid=2963024"