FFCP PHASE1:Mm9::chr11:100217415..100217422,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15114|HGNC=|MCL_coexpression_id=159|UniProt=O35668|association_with_transcript=-14bp_to_ENSMUST00000103124_5end|description=CAGE_peak_3_at_Hap1_5end|id=chr11:100217415..100217422,-|ontology_enrichment_celltype=CL:0000540!2.94e-15!33;CL:0000047!2.94e-15!33;CL:0000031!2.94e-15!33;CL:0000404!2.94e-15!33;CL:0000117!9.17e-13!23;CL:0000337!9.17e-13!23;CL:0000221!1.47e-11!44;CL:0000133!1.47e-11!44;CL:0002319!3.43e-11!43;CL:0000393!8.07e-11!39;CL:0000211!8.07e-11!39;CL:0000055!1.08e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,5.65e-15,33;CL:0000047,5.65e-15,33;CL:0000031,5.65e-15,33;CL:0000404,5.65e-15,33;CL:0000117,1.05e-13,23;CL:0000337,1.05e-13,23;CL:0000221,8.23e-12,44;CL:0000133,8.23e-12,44;CL:0000393,2.62e-11,39;CL:0000211,2.62e-11,39;CL:0002319,2.65e-11,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.16e-30!73;UBERON:0005743!8.16e-30!73;UBERON:0000073!6.02e-29!75;UBERON:0001016!6.02e-29!75;UBERON:0004121!1.97e-26!102;UBERON:0000924!1.97e-26!102;UBERON:0006601!1.97e-26!102;UBERON:0002346!2.39e-26!71;UBERON:0003075!2.39e-26!71;UBERON:0007284!2.39e-26!71;UBERON:0001049!8.71e-22!52;UBERON:0005068!8.71e-22!52;UBERON:0006241!8.71e-22!52;UBERON:0007135!8.71e-22!52;UBERON:0000033!2.05e-21!63;UBERON:0000955!2.43e-20!50;UBERON:0006238!2.43e-20!50;UBERON:0002616!1.33e-19!49;UBERON:0003056!8.29e-19!49;UBERON:0003080!5.11e-17!40;UBERON:0002780!2.47e-16!39;UBERON:0001890!2.47e-16!39;UBERON:0006240!2.47e-16!39;UBERON:0002020!4.43e-15!34;UBERON:0002791!1.08e-11!29;UBERON:0003528!1.08e-11!29;UBERON:0001893!1.08e-11!29;UBERON:0007811!9.33e-10!86;UBERON:0000153!8.83e-08!94;UBERON:0000956!8.53e-07!21;UBERON:0001869!8.53e-07!21;UBERON:0000203!8.53e-07!21;UBERON:0002420!9.23e-07!8;UBERON:0007245!9.23e-07!8;UBERON:0010009!9.23e-07!8;UBERON:0010011!9.23e-07!8;UBERON:0000454!9.23e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.99e-38,73;UBERON:0001016,1.16e-36,75;UBERON:0000073,2.39e-31,54;UBERON:0004121,2.62e-31,95;UBERON:0000924,2.62e-31,95;UBERON:0006601,2.62e-31,95;UBERON:0002346,3.42e-29,64;UBERON:0003075,3.42e-29,64;UBERON:0007284,3.42e-29,64;UBERON:0001049,3.93e-29,52;UBERON:0005068,3.93e-29,52;UBERON:0006241,3.93e-29,52;UBERON:0007135,3.93e-29,52;UBERON:0010371,7.04e-26,73;UBERON:0000955,5.36e-24,47;UBERON:0006238,5.36e-24,47;UBERON:0002616,6.24e-23,46;UBERON:0003080,1.19e-21,40;UBERON:0003056,3.13e-21,49;UBERON:0002780,1.22e-20,39;UBERON:0001890,1.22e-20,39;UBERON:0006240,1.22e-20,39;UBERON:0010314,2.35e-20,92;UBERON:0002020,1.17e-18,34;UBERON:0003528,9.97e-14,29;UBERON:0002791,9.97e-14,29;UBERON:0001893,9.97e-14,29;UBERON:0002420,1.38e-09,8;UBERON:0007245,1.38e-09,8;UBERON:0010009,1.38e-09,8;UBERON:0010011,1.38e-09,8;UBERON:0000454,1.38e-09,8;UBERON:0002021,1.61e-09,10;UBERON:0000411,1.61e-09,10;UBERON:0001950,1.61e-09,10;UBERON:0001894,4.68e-08,10;UBERON:0006222,4.68e-08,10;UBERON:0002619,6.56e-08,17;UBERON:0003076,7.14e-08,12;UBERON:0003057,7.14e-08,12;UBERON:0002240,1.58e-07,6;UBERON:0005174,1.58e-07,6;UBERON:0001137,1.58e-07,6;UBERON:0000956,7.66e-07,21;UBERON:0001869,7.66e-07,21;UBERON:0000203,7.66e-07,21;UBERON:0001948,9.13e-07,5;UBERON:0002315,9.13e-07,5|phase1_expression=2.08193501236232,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,1.9559956734746,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,1.84519436275371,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0.218025156380447,0,0,0,1.43752564364972,0,0,0,0,0,0.515672092277442,12.7459370341547,10.5798195854407,8.87363964908651,0,0,0,0,0,0.299600110518405,1.92109152660777,0.829516898467821,0.270011876663381,0.841299845405528,14.568200204594,13.693849539,0.734944795289724,1.53352753629178,0.919218786610021,11.0115880999389,9.06580100404833,8.1411462625809,15.9582408153535,16.3762882048313,17.7110545989298,9.49222196604695,13.5063026407603,13.1406493088057,12.374400589894,15.8032565687004,8.94717339961443,0.227178579999552,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0.432982082022428,0.253359865475099,0,0,0.258937883647172,0.890652834388949,1.56136794089522,0.608930956624282,0.461230994512117,1.20578112442098,2.11659672844269,1.0053327306374,0,0,0,0.161766849947409,0,0,0,2.34224637609238,1.25668024088073,0.255457055208591,0,0,0,11.2342979553617,5.94750783664214,4.39790232395025,7.47444576826789,6.64860189058859,8.51930982694196,10.2211995732687,0.203678727700633,0.373220911830279,2.52722758433675,0.841767423545896,0.910843100738926,0.229902104433473,0.720248519221397,1.20563854268572,1.56483948048054,1.5373646434182,1.40552586839593,2.32833033665114,0.215567992932842,0,0.527853372491847,0,0,0,0,0,0,0,0,0.414251545071004,0.469052119962192,0,0.23674473558521,0,0,0,0,0,0.329119699826961,0,0.0810688095458557,0,0,0,8.41159794256509,3.2929475961371,0,0,0,0.696710015581316,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.329397909448022,0.5026704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| ||
|EntrezGene=15114 | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|UniProt=O35668 | |||
|association_with_transcript=-14bp_to_ENSMUST00000103124_5end | |||
|description=CAGE_peak_3_at_Hap1_5end | |||
|id=chr11:100217415..100217422,- | |||
|ontology_enrichment_celltype=CL:0000540!2.94e-15!33;CL:0000047!2.94e-15!33;CL:0000031!2.94e-15!33;CL:0000404!2.94e-15!33;CL:0000117!9.17e-13!23;CL:0000337!9.17e-13!23;CL:0000221!1.47e-11!44;CL:0000133!1.47e-11!44;CL:0002319!3.43e-11!43;CL:0000393!8.07e-11!39;CL:0000211!8.07e-11!39;CL:0000055!1.08e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.65e-15,33;CL:0000047,5.65e-15,33;CL:0000031,5.65e-15,33;CL:0000404,5.65e-15,33;CL:0000117,1.05e-13,23;CL:0000337,1.05e-13,23;CL:0000221,8.23e-12,44;CL:0000133,8.23e-12,44;CL:0000393,2.62e-11,39;CL:0000211,2.62e-11,39;CL:0002319,2.65e-11,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.16e-30!73;UBERON:0005743!8.16e-30!73;UBERON:0000073!6.02e-29!75;UBERON:0001016!6.02e-29!75;UBERON:0004121!1.97e-26!102;UBERON:0000924!1.97e-26!102;UBERON:0006601!1.97e-26!102;UBERON:0002346!2.39e-26!71;UBERON:0003075!2.39e-26!71;UBERON:0007284!2.39e-26!71;UBERON:0001049!8.71e-22!52;UBERON:0005068!8.71e-22!52;UBERON:0006241!8.71e-22!52;UBERON:0007135!8.71e-22!52;UBERON:0000033!2.05e-21!63;UBERON:0000955!2.43e-20!50;UBERON:0006238!2.43e-20!50;UBERON:0002616!1.33e-19!49;UBERON:0003056!8.29e-19!49;UBERON:0003080!5.11e-17!40;UBERON:0002780!2.47e-16!39;UBERON:0001890!2.47e-16!39;UBERON:0006240!2.47e-16!39;UBERON:0002020!4.43e-15!34;UBERON:0002791!1.08e-11!29;UBERON:0003528!1.08e-11!29;UBERON:0001893!1.08e-11!29;UBERON:0007811!9.33e-10!86;UBERON:0000153!8.83e-08!94;UBERON:0000956!8.53e-07!21;UBERON:0001869!8.53e-07!21;UBERON:0000203!8.53e-07!21;UBERON:0002420!9.23e-07!8;UBERON:0007245!9.23e-07!8;UBERON:0010009!9.23e-07!8;UBERON:0010011!9.23e-07!8;UBERON:0000454!9.23e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.99e-38,73;UBERON:0001016,1.16e-36,75;UBERON:0000073,2.39e-31,54;UBERON:0004121,2.62e-31,95;UBERON:0000924,2.62e-31,95;UBERON:0006601,2.62e-31,95;UBERON:0002346,3.42e-29,64;UBERON:0003075,3.42e-29,64;UBERON:0007284,3.42e-29,64;UBERON:0001049,3.93e-29,52;UBERON:0005068,3.93e-29,52;UBERON:0006241,3.93e-29,52;UBERON:0007135,3.93e-29,52;UBERON:0010371,7.04e-26,73;UBERON:0000955,5.36e-24,47;UBERON:0006238,5.36e-24,47;UBERON:0002616,6.24e-23,46;UBERON:0003080,1.19e-21,40;UBERON:0003056,3.13e-21,49;UBERON:0002780,1.22e-20,39;UBERON:0001890,1.22e-20,39;UBERON:0006240,1.22e-20,39;UBERON:0010314,2.35e-20,92;UBERON:0002020,1.17e-18,34;UBERON:0003528,9.97e-14,29;UBERON:0002791,9.97e-14,29;UBERON:0001893,9.97e-14,29;UBERON:0002420,1.38e-09,8;UBERON:0007245,1.38e-09,8;UBERON:0010009,1.38e-09,8;UBERON:0010011,1.38e-09,8;UBERON:0000454,1.38e-09,8;UBERON:0002021,1.61e-09,10;UBERON:0000411,1.61e-09,10;UBERON:0001950,1.61e-09,10;UBERON:0001894,4.68e-08,10;UBERON:0006222,4.68e-08,10;UBERON:0002619,6.56e-08,17;UBERON:0003076,7.14e-08,12;UBERON:0003057,7.14e-08,12;UBERON:0002240,1.58e-07,6;UBERON:0005174,1.58e-07,6;UBERON:0001137,1.58e-07,6;UBERON:0000956,7.66e-07,21;UBERON:0001869,7.66e-07,21;UBERON:0000203,7.66e-07,21;UBERON:0001948,9.13e-07,5;UBERON:0002315,9.13e-07,5 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,1.9559956734746,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,1.84519436275371,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0.218025156380447,0,0,0,1.43752564364972,0,0,0,0,0,0.515672092277442,12.7459370341547,10.5798195854407,8.87363964908651,0,0,0,0,0,0.299600110518405,1.92109152660777,0.829516898467821,0.270011876663381,0.841299845405528,14.568200204594,13.693849539,0.734944795289724,1.53352753629178,0.919218786610021,11.0115880999389,9.06580100404833,8.1411462625809,15.9582408153535,16.3762882048313,17.7110545989298,9.49222196604695,13.5063026407603,13.1406493088057,12.374400589894,15.8032565687004,8.94717339961443,0.227178579999552,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0.432982082022428,0.253359865475099,0,0,0.258937883647172,0.890652834388949,1.56136794089522,0.608930956624282,0.461230994512117,1.20578112442098,2.11659672844269,1.0053327306374,0,0,0,0.161766849947409,0,0,0,2.34224637609238,1.25668024088073,0.255457055208591,0,0,0,11.2342979553617,5.94750783664214,4.39790232395025,7.47444576826789,6.64860189058859,8.51930982694196,10.2211995732687,0.203678727700633,0.373220911830279,2.52722758433675,0.841767423545896,0.910843100738926,0.229902104433473,0.720248519221397,1.20563854268572,1.56483948048054,1.5373646434182,1.40552586839593,2.32833033665114,0.215567992932842,0,0.527853372491847,0,0,0,0,0,0,0,0,0.414251545071004,0.469052119962192,0,0.23674473558521,0,0,0,0,0,0.329119699826961,0,0.0810688095458557,0,0,0,8.41159794256509,3.2929475961371,0,0,0,0.696710015581316,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0,0.342745537829186,0,0.610953983535943,0.387904974335251,0.701358198903186,0.69560190836683,0,0.156998727841375,0.123397163921801,0.592905254174298,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0,0,0.369506380333209,0.189491411770485,0.325929952884052,0.339490171550376,0.234690248288502,0,0.238043640886014,0.195133647857799,0.630540576424764,0.44292937929755,0.318909537314974,0.327726629431476,0.518054945597687,0.433947175744535,0,0.54390568381871,0,0,4.97706828962155,6.21221938938677,0.163934945376675,0.252470927204373,1.89304931649754,0.780877488593277,1.29254038639679,0.716906393857656,2.22798674082394,1.13230612315533,1.21443210502468,2.33804686329049,0.790575555893047,13.8168166061377,0.141940085208269,0.35613120733451,0.488660878060728,0.164970122972535,0,0.485561272309963,0.302323556964751,0.377210159511796,0,0,0.516856586336442,0.727067458955011,0.712994756769443,0.316036757935816,0,0,3.06395645178409,1.62054984628179,2.19909762430683,1.50035924522115,1.59606210278046,1.42695054081656,2.79733335023606,4.56697423671899,0.469343416127421,0.63549621259146,1.32317038832977,0,0,0.120625849856312,0.119372344003136,0,0.291480836629851,3.70850604021019,1.02522528478712,0,0,0,0.27338845544205,0.457556346413045,0.169978429993855,0.139951452323658,0,0,0.474503990371703,0,0.108005340821801,0,0.218362563746178,0,0.330613822901344,0,0.129614973291793,0,0,0,0.165458490457098,0.388902376688095,0,0.675824501963113,0.938857909166032,0.5208175393758,0.734015410979976,0.724752362478018,1.15212002503146,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0,0,0,0.288635524920988,0.116876902181569,0,0.887943813496259,0.538283139656854,0.503653849092235,0.386379188064381,0,0,0,0,2.82375921308533,2.76195141904306,5.15605962095457,2.57779773515531,2.74033007908257,9.82012066606611,8.10027000278167,7.65546045481175,3.17199686288943,4.14208249401456,0.726511433089237,0.798049746802062,0.512200817262403,0.486213434136588,1.04806581313991,1.65459157605013,0.888986911206461,0.824140228955577,1.28367683836726,1.76888048234658,1.01391719956096,0.754505365544305,1.49826411951812,1.40855335290712,0.746661096422973,2.38146845641537,1.39061191133827,2.12200142510076,2.06042950401653,1.17759136107518,1.37147700954166,1.06485483695602,1.1921809497366,2.0348498328526,1.50575008664529,1.60767754994185,2.0122077016005,1.05227884575137,1.08643291076689,1.68342681497322,1.89816028998679,1.87158516513571,1.22769312950907,0.929621047115796,0.578719832943424,2.49810577937946,0.467863216890817,1.07435527024149,1.14772999241306,0.441182838239031,0.463735671240843 | |||
|short_description=p3@Hap1 | |||
}} |
Revision as of 18:10, 12 September 2013
Short description: | p3@Hap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | -14bp_to_ENSMUST00000103124_5end |
EntrezGene: | Hap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.65e-15 | 33 |
neuronal stem cell | 5.65e-15 | 33 |
neuroblast | 5.65e-15 | 33 |
electrically signaling cell | 5.65e-15 | 33 |
CNS neuron (sensu Vertebrata) | 1.05e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.05e-13 | 23 |
ectodermal cell | 8.23e-12 | 44 |
neurectodermal cell | 8.23e-12 | 44 |
electrically responsive cell | 2.62e-11 | 39 |
electrically active cell | 2.62e-11 | 39 |
neural cell | 2.65e-11 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.