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FFCP PHASE1:Mm9::chr5:139801444..139801522,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=231821|HGNC=|MCL_coexpression_id=240|UniProt=Q8BVR8,E9PY16,Q6PGM4|association_with_transcript=-26bp_to_ENSMUST00000171793,NM_172723,uc009agi.1_5end|description=CAGE_peak_1_at_Adap1_5end|id=chr5:139801444..139801522,-|ontology_enrichment_celltype=CL:0000117!4.67e-07!23;CL:0000337!4.67e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.41e-07,23;CL:0000337,4.41e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.69e-11!34;UBERON:0001049!7.38e-11!52;UBERON:0005068!7.38e-11!52;UBERON:0006241!7.38e-11!52;UBERON:0007135!7.38e-11!52;UBERON:0000955!9.50e-10!50;UBERON:0006238!9.50e-10!50;UBERON:0002616!1.92e-09!49;UBERON:0002791!3.85e-09!29;UBERON:0003528!3.85e-09!29;UBERON:0001893!3.85e-09!29;UBERON:0001017!9.37e-09!73;UBERON:0005743!9.37e-09!73;UBERON:0000344!2.25e-08!15;UBERON:0000073!3.02e-08!75;UBERON:0001016!3.02e-08!75;UBERON:0002021!1.44e-07!10;UBERON:0000411!1.44e-07!10;UBERON:0001950!1.44e-07!10;UBERON:0001242!1.84e-07!13;UBERON:0000060!1.84e-07!13;UBERON:0001262!1.84e-07!13;UBERON:0004786!1.84e-07!13;UBERON:0003080!2.56e-07!40;UBERON:0002780!6.15e-07!39;UBERON:0001890!6.15e-07!39;UBERON:0006240!6.15e-07!39;UBERON:0000033!9.69e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.45e-11,54;UBERON:0002020,1.53e-11,34;UBERON:0001049,9.01e-11,52;UBERON:0005068,9.01e-11,52;UBERON:0006241,9.01e-11,52;UBERON:0007135,9.01e-11,52;UBERON:0000160,3.77e-10,31;UBERON:0003528,3.57e-09,29;UBERON:0002791,3.57e-09,29;UBERON:0001893,3.57e-09,29;UBERON:0005409,6.27e-09,47;UBERON:0001017,1.60e-08,73;UBERON:0000955,1.80e-08,47;UBERON:0006238,1.80e-08,47;UBERON:0000344,2.10e-08,15;UBERON:0002616,3.56e-08,46;UBERON:0001016,5.02e-08,75;UBERON:0002021,1.36e-07,10;UBERON:0000411,1.36e-07,10;UBERON:0001950,1.36e-07,10;UBERON:0001242,1.73e-07,13;UBERON:0001262,1.73e-07,13;UBERON:0004786,1.73e-07,13;UBERON:0003080,3.13e-07,40;UBERON:0002346,6.36e-07,64;UBERON:0003075,6.36e-07,64;UBERON:0007284,6.36e-07,64;UBERON:0002780,7.53e-07,39;UBERON:0001890,7.53e-07,39;UBERON:0006240,7.53e-07,39|phase1_expression=2.7225304007815,157.387908845352,165.164723898402,100.720582365174,131.234681245943,44.3201277847389,41.1158247448125,5.55230290798778,0.422366166455,0.468129052643987,0.68487187290202,1.11681022593471,0.684802919724823,0.262261207256992,3.66420737997229,4.04950534779652,0,8.20201629931418,7.67840828192137,10.1853516431527,13.2667532635669,11.1205865344992,8.097193463307,43.1979541542198,41.9818984352921,126.905264069419,72.3680153547246,76.4922876034906,56.2469321590867,71.5765568518203,45.4547546843375,2.54012269383853,4.30545351309199,0,8.66554859253824,11.9688944658114,9.80012910059372,30.9713406745312,15.626706890476,17.7998072951091,21.1763335691165,37.5675016727145,35.4422557712742,1.76255545165808,2.12891555560981,0,2.34717403304412,1.96222640742402,3.73466510648602,1.1665793944457,1.67983705950435,1.43752564364972,7.21465206048266,8.70434570413613,1.34437519656986,0.257259436035947,1.14613375975503,0,26.5034563726073,32.268449735594,29.1562445612842,0.338844532069132,0,45.4449357227106,49.4433181283487,51.8650483910653,24.5672090625092,21.1320067926855,3.83651565541367,3.78016627328734,3.15487442027073,59.4154047559911,47.0449992226937,8.81933754347669,6.51749202924007,3.67687514644008,36.3382407297983,46.6058784010935,39.7840921133671,26.9048026969595,22.0485221081807,29.1711487511786,49.6945738222458,40.518907922281,37.5883689530953,44.4889164065238,39.1522122197533,36.3478919359336,2.65041676666144,1.73814588245607,5.79728977403356,1.72084775396277,0,0,0,0,7.72444310724635,0,0.259786004602869,0,4.78867627240714,0,0,0,1.29894624606728,2.02687892380079,3.53867111510348,11.7609396110632,8.54495016035667,2.9688427812965,2.25530924795977,4.87144765299426,3.45923245884088,3.46662073271032,2.23418543557839,3.89566433121994,8.40462890296871,2.31358971071859,13.2691582792481,3.07357014900077,3.97514733228708,3.39412677194655,16.775258509631,33.0842300623048,46.9160623262139,46.237726992755,14.8570754387341,13.7977628128484,13.8506547509641,41.0426351969214,34.312545211397,50.01043214092,58.0573229442203,101.774752017472,40.3108806445547,57.595648389054,2.64782346010822,5.84712761867437,0,1.89397670297827,0.650602214813519,1.60931473103431,1.26043490863744,2.86339153887859,3.60593445502038,4.61209393025459,4.8724896771059,3.88055056108524,0,0,0.351902248327898,1.09597866213787,0.556094498451196,0,1.23469281844766,0.995171334092466,4.21327912387941,11.0659600059328,19.6072814582959,0.828503090142008,0.234526059981096,0.540186184383045,0.23674473558521,0.787056926989615,0.771335564436891,0.697601834251224,0.804820204198858,0.467061369468678,1.48103864922132,0.32833492815819,1.05389452409612,1.75439984910399,2.63460138349261,2.41571553768669,35.3287113587734,24.1825839091318,53.8582616263591,30.4118151663076,0.639864751605702,1.85789337488351,7.60318021800351,10.2858597557905,9.11749979763968,16.9300807240178,40.809499292828,18.1168850196412,18.09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|EntrezGene=231821
|HGNC=
|MCL_coexpression_id=240
|UniProt=Q8BVR8,E9PY16,Q6PGM4
|association_with_transcript=-26bp_to_ENSMUST00000171793,NM_172723,uc009agi.1_5end
|description=CAGE_peak_1_at_Adap1_5end
|id=chr5:139801444..139801522,-
|ontology_enrichment_celltype=CL:0000117!4.67e-07!23;CL:0000337!4.67e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.41e-07,23;CL:0000337,4.41e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.69e-11!34;UBERON:0001049!7.38e-11!52;UBERON:0005068!7.38e-11!52;UBERON:0006241!7.38e-11!52;UBERON:0007135!7.38e-11!52;UBERON:0000955!9.50e-10!50;UBERON:0006238!9.50e-10!50;UBERON:0002616!1.92e-09!49;UBERON:0002791!3.85e-09!29;UBERON:0003528!3.85e-09!29;UBERON:0001893!3.85e-09!29;UBERON:0001017!9.37e-09!73;UBERON:0005743!9.37e-09!73;UBERON:0000344!2.25e-08!15;UBERON:0000073!3.02e-08!75;UBERON:0001016!3.02e-08!75;UBERON:0002021!1.44e-07!10;UBERON:0000411!1.44e-07!10;UBERON:0001950!1.44e-07!10;UBERON:0001242!1.84e-07!13;UBERON:0000060!1.84e-07!13;UBERON:0001262!1.84e-07!13;UBERON:0004786!1.84e-07!13;UBERON:0003080!2.56e-07!40;UBERON:0002780!6.15e-07!39;UBERON:0001890!6.15e-07!39;UBERON:0006240!6.15e-07!39;UBERON:0000033!9.69e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.45e-11,54;UBERON:0002020,1.53e-11,34;UBERON:0001049,9.01e-11,52;UBERON:0005068,9.01e-11,52;UBERON:0006241,9.01e-11,52;UBERON:0007135,9.01e-11,52;UBERON:0000160,3.77e-10,31;UBERON:0003528,3.57e-09,29;UBERON:0002791,3.57e-09,29;UBERON:0001893,3.57e-09,29;UBERON:0005409,6.27e-09,47;UBERON:0001017,1.60e-08,73;UBERON:0000955,1.80e-08,47;UBERON:0006238,1.80e-08,47;UBERON:0000344,2.10e-08,15;UBERON:0002616,3.56e-08,46;UBERON:0001016,5.02e-08,75;UBERON:0002021,1.36e-07,10;UBERON:0000411,1.36e-07,10;UBERON:0001950,1.36e-07,10;UBERON:0001242,1.73e-07,13;UBERON:0001262,1.73e-07,13;UBERON:0004786,1.73e-07,13;UBERON:0003080,3.13e-07,40;UBERON:0002346,6.36e-07,64;UBERON:0003075,6.36e-07,64;UBERON:0007284,6.36e-07,64;UBERON:0002780,7.53e-07,39;UBERON:0001890,7.53e-07,39;UBERON:0006240,7.53e-07,39
|phase1_expression=2.7225304007815,157.387908845352,165.164723898402,100.720582365174,131.234681245943,44.3201277847389,41.1158247448125,5.55230290798778,0.422366166455,0.468129052643987,0.68487187290202,1.11681022593471,0.684802919724823,0.262261207256992,3.66420737997229,4.04950534779652,0,8.20201629931418,7.67840828192137,10.1853516431527,13.2667532635669,11.1205865344992,8.097193463307,43.1979541542198,41.9818984352921,126.905264069419,72.3680153547246,76.4922876034906,56.2469321590867,71.5765568518203,45.4547546843375,2.54012269383853,4.30545351309199,0,8.66554859253824,11.9688944658114,9.80012910059372,30.9713406745312,15.626706890476,17.7998072951091,21.1763335691165,37.5675016727145,35.4422557712742,1.76255545165808,2.12891555560981,0,2.34717403304412,1.96222640742402,3.73466510648602,1.1665793944457,1.67983705950435,1.43752564364972,7.21465206048266,8.70434570413613,1.34437519656986,0.257259436035947,1.14613375975503,0,26.5034563726073,32.268449735594,29.1562445612842,0.338844532069132,0,45.4449357227106,49.4433181283487,51.8650483910653,24.5672090625092,21.1320067926855,3.83651565541367,3.78016627328734,3.15487442027073,59.4154047559911,47.0449992226937,8.81933754347669,6.51749202924007,3.67687514644008,36.3382407297983,46.6058784010935,39.7840921133671,26.9048026969595,22.0485221081807,29.1711487511786,49.6945738222458,40.518907922281,37.5883689530953,44.4889164065238,39.1522122197533,36.3478919359336,2.65041676666144,1.73814588245607,5.79728977403356,1.72084775396277,0,0,0,0,7.72444310724635,0,0.259786004602869,0,4.78867627240714,0,0,0,1.29894624606728,2.02687892380079,3.53867111510348,11.7609396110632,8.54495016035667,2.9688427812965,2.25530924795977,4.87144765299426,3.45923245884088,3.46662073271032,2.23418543557839,3.89566433121994,8.40462890296871,2.31358971071859,13.2691582792481,3.07357014900077,3.97514733228708,3.39412677194655,16.775258509631,33.0842300623048,46.9160623262139,46.237726992755,14.8570754387341,13.7977628128484,13.8506547509641,41.0426351969214,34.312545211397,50.01043214092,58.0573229442203,101.774752017472,40.3108806445547,57.595648389054,2.64782346010822,5.84712761867437,0,1.89397670297827,0.650602214813519,1.60931473103431,1.26043490863744,2.86339153887859,3.60593445502038,4.61209393025459,4.8724896771059,3.88055056108524,0,0,0.351902248327898,1.09597866213787,0.556094498451196,0,1.23469281844766,0.995171334092466,4.21327912387941,11.0659600059328,19.6072814582959,0.828503090142008,0.234526059981096,0.540186184383045,0.23674473558521,0.787056926989615,0.771335564436891,0.697601834251224,0.804820204198858,0.467061369468678,1.48103864922132,0.32833492815819,1.05389452409612,1.75439984910399,2.63460138349261,2.41571553768669,35.3287113587734,24.1825839091318,53.8582616263591,30.4118151663076,0.639864751605702,1.85789337488351,7.60318021800351,10.2858597557905,9.11749979763968,16.9300807240178,40.809499292828,18.1168850196412,18.0961350336194,13.5290400987983,16.9618755793635,29.6610404855893,34.3659499300764,35.4471466392774,0.758671603812327,1.82797620175566,1.1270773567308,3.25842124552503,3.49114476901726,4.69909993265134,5.37510565556187,8.70899873079653,11.4609071324204,21.4711065223933,0.592905254174298,1.66845105716094,1.57247196090562,2.24862112384854,2.43432145666204,4.10001171579109,4.58326533206556,3.74004978686054,5.0261920300261,3.0201755450689,4.31304619582064,3.72140947668503,1.5601883655728,0.757736633841335,0.358794827043824,1.4473305640901,3.14080423283228,1.13694847062291,1.30371981153621,2.37643120085263,1.40814148973101,1.84256883185997,1.6663054862021,2.73187107000918,2.52216230569906,2.87904096543407,4.78364305972461,3.60499292374624,5.35323443784276,2.89298117163023,30.1582567878545,32.0904353453039,1.96705709207614,3.03530420935206,48.646828766301,54.2690108921901,0,2.52470927204373,0.631016438832513,0.390438744296638,2.15423397732799,0.955875191810208,2.00518806674155,1.13230612315533,0.404810701674894,2.92255857911312,2.37172666767914,23.4564560987919,1.56134093729095,2.67098405500883,3.09485222771795,3.95928295134085,2.65490276679926,1.21390318077491,2.41858845571801,1.32023555829129,1.47650946440386,3.68922177532713,8.5281336745513,2.54473610634254,2.49548164869305,3.16036757935816,1.05418608574999,1.03135543248187,1.36175842301515,1.26042765821917,0.388076051348264,1.50035924522115,0.886701168211368,3.92411398724555,7.40470592709544,9.74287837166718,7.27482294997502,2.75381692122966,1.10264199027481,3.46261131177108,1.13025098687134,3.31721087104857,2.74556391207214,2.46211349617592,36.7265854153612,47.8397279187115,5.63873906632914,4.12773735926445,2.40752885580625,3.95573759709851,2.87057878214153,6.40578884978263,12.0684685295637,8.6769900440668,9.12119827109197,6.68269432610579,0.632671987162271,1.82987520414164,6.48032044930808,6.89991376847747,10.4814030598165,10.9240120571705,13.9684340175818,11.5172614472973,20.8680106999787,1.24267862617385,0.56369293868419,0,0.165458490457098,0.777804753376191,1.54991788173277,0.337912250981556,1.05621514781179,1.17183946359555,1.46803082195995,0.241584120826006,0.288030006257865,2.52808896502543,2.22997736819181,3.59488350076895,1.68897069871134,1.79026695667481,1.39076948346885,3.12508168751919,2.36303243479324,2.01932899896295,1.82896335972,2.11734988787365,1.8516997340553,1.73181314952593,1.63627663054197,3.17422537061296,0.221985953374065,0.807424709485281,0.335769232728157,15.8415467106396,3.19060208267009,4.39563898241436,4.71610433973945,0,82.4537690220917,76.8743144966985,74.4764167471216,84.8954720777817,72.6187470956881,60.431511791176,61.4270475210943,55.8398291998033,52.1113770331835,51.776031175182,0.518936737920883,3.99024873401031,2.73173769206615,3.64660075602441,8.17491334249131,10.8467669985508,6.88964856185007,4.12070114477788,3.53011130550997,6.06473308233114,5.83002389747551,4.71565853465191,8.24045265734965,7.04276676453562,7.52404643318534,6.66811167796303,8.11190281613988,7.7163688185482,5.35711671044299,6.91834924631667,4.4573002810104,7.98641127717019,6.43777712857767,6.83128158171944,6.86998477031913,8.54607539705933,9.69518256225695,6.05060336307039,4.88894809845102,10.1005608898393,9.13489639556141,8.17587203717177,5.32000356120596,8.52152626522813,5.40138510747196,15.4882558321526,7.01794825336225,6.23126056740065,4.78220830172108,3.97064554415128,4.17362104116759
|short_description=p1@Adap1
}}

Revision as of 06:51, 14 September 2013

Short description:p1@Adap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Adap1_5end
Coexpression cluster:MCL_coexpression_mm9:240
Association with transcript: -26bp_to_ENSMUST00000171793, NM_172723, uc009agi.1_5end
EntrezGene:Adap1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Adap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5157.39
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6165.16
CD326+ enterocyte, pool1.CNhs13542.11848-124I3100.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I4131.23
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I744.32
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I841.12
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.20
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.68
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.10
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D143.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D241.98
GP2+ M cell, pool1.CNhs13228.11845-124H9126.91
GP2+ M cell, pool2.CNhs13231.11846-124I172.37
GP2+ M cell, pool3.CNhs13240.11847-124I276.49
Ileum epithelium, pool1.CNhs13199.10252-104B956.25
Ileum epithelium, pool2.CNhs13232.10253-104C171.58
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C845.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.67
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G830.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H115.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H317.80
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G921.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H237.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H435.44
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.21
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C326.50
Mouse Granule cells, donor2.CNhs12357.11731-123E332.27
Mouse Granule cells, donor3.CNhs12108.11636-122C729.16
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C745.44
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E749.44
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D251.87
Mouse Microglia, donor1.CNhs12629.11718-123C824.57
Mouse Microglia, donor2.CNhs12634.11736-123E821.13
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F159.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D547.04
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.52
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D336.34
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F346.61
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D739.78
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D426.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F422.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D829.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E449.69
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E540.52
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I637.59
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D644.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F639.15
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E136.35
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F91.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.76
accessory axillary lymph node, adult.CNhs10475.1063-29H98.54
adrenal gland, adult.CNhs10508.49-24D72.97
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I33.90
amnion, adult pregnant day17.5.CNhs10488.583-22A88.40
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G213.27
bone (os femoris), neonate N02.CNhs11227.1985-43F53.07
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B233.08
cerebellum, neonate N30.CNhs11135.1395-42I246.92
colon, adult.CNhs10468.36-18H746.24
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C714.86
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.85
corpora quadrigemina, adult.CNhs10501.16-22A441.04
corpus striatum, adult.CNhs10487.19-21D834.31
corpus striatum, neonate N00.CNhs11226.630-43F150.01
cortex, adult.CNhs10473.12-14D558.06
cortex, neonate N30.CNhs11107.1392-42F2101.77
diencephalon, adult.CNhs10482.20-12F240.31
diencephalon, neonate N30.CNhs11201.1388-42B257.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.85
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C63.61
eyeball, neonate N01.CNhs11140.1532-43E74.61
eyeball, neonate N02.CNhs11205.1551-44G84.87
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.07
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.61
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E835.33
hippocampus, neonate N00.CNhs11228.627-43G124.18
intestinal mucosa, adult.CNhs10506.860-29I353.86
intestine, adult.CNhs10496.178-9A330.41
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D87.60
intestine, embryo E16.CNhs10585.463-22H410.29
intestine, embryo E17.CNhs10582.482-18D39.12
intestine, embryo E18.CNhs10526.1289-20F716.93
intestine, neonate N00.CNhs11126.644-26D140.81
intestine, neonate N01.CNhs11192.1322-23E918.12
intestine, neonate N06.CNhs11102.688-20B818.10
intestine, neonate N07.CNhs11095.720-20F213.53
intestine, neonate N10.CNhs11098.755-23A516.96
intestine, neonate N20.CNhs11187.827-18D129.66
intestine, neonate N25.CNhs11121.1352-25E334.37
intestine, neonate N30.CNhs11131.1384-42G135.45
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G74.70
kidney, neonate N10.CNhs11206.758-6D55.38
kidney, neonate N20.CNhs11113.832-19I18.71
kidney, neonate N25.CNhs11122.1353-25F311.46
kidney, neonate N30.CNhs11203.1385-42H121.47
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A34.58
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F45.03
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E64.78
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C75.35
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A130.16
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A132.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C248.65
medulla oblongata, neonate N30.CNhs11200.1396-42A354.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I923.46
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I43.09
oviduct, adult pregnant day01.CNhs10500.988-6G63.96
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G98.53
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F57.40
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I77.27
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H33.32
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I136.73
spinal cord, adult.CNhs10505.24-13C947.84
spleen, adult.CNhs10465.25-2G25.64
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D13.96
spleen, neonate N20.CNhs11112.824-19H12.87
spleen, neonate N25.CNhs11099.1354-25G36.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.12
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D46.48
stomach, embryo E17.CNhs11006.1035-18D56.90
stomach, embryo E18.CNhs10999.1286-20C610.48
stomach, neonate N03.CNhs11193.1340-24B810.92
stomach, neonate N07.CNhs11210.718-18A913.97
stomach, neonate N25.CNhs11104.1355-25E411.52
stomach, neonate N30.CNhs11134.1386-42I120.87
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I23.59
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F83.13
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C42.02
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A21.85
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E415.84
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E54.40
vagina, adult.CNhs10502.89-27D54.72
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A182.45
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A276.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A374.48
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D784.90
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A472.62
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A560.43
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A661.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A755.84
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A852.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A951.78
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B18.17
whole body, embryo E16.CNhs10514.453-14F210.85
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.72
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.83
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.87
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.55
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.70
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.52
whole body, embryo E17.5.CNhs10513.490-9F95.40
whole body, embryo E17.CNhs10517.475-3I515.49
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C64.78
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.41e-0723
neuroblast (sensu Vertebrata)4.41e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.45e-1154
gray matter1.53e-1134
neural tube9.01e-1152
neural rod9.01e-1152
future spinal cord9.01e-1152
neural keel9.01e-1152
intestine3.77e-1031
brain grey matter3.57e-0929
regional part of telencephalon3.57e-0929
telencephalon3.57e-0929
gastrointestinal system6.27e-0947
central nervous system1.60e-0873
brain1.80e-0847
future brain1.80e-0847
mucosa2.10e-0815
regional part of brain3.56e-0846
nervous system5.02e-0875
occipital lobe1.36e-0710
visual cortex1.36e-0710
neocortex1.36e-0710
intestinal mucosa1.73e-0713
wall of intestine1.73e-0713
gastrointestinal system mucosa1.73e-0713
anterior neural tube3.13e-0740
neurectoderm6.36e-0764
neural plate6.36e-0764
presumptive neural plate6.36e-0764
regional part of forebrain7.53e-0739
forebrain7.53e-0739
future forebrain7.53e-0739







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