FFCP PHASE1:Mm9::chr6:91067002..91067017,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=54563|HGNC=|UniProt=Q9QY81|association_with_transcript=-179bp_to_ENSMUST00000032179_5end|description=CAGE_peak_3_at_Nup210_5end|id=chr6:91067002..91067017,-|ontology_enrichment_celltype=CL:0000838!7.01e-07!12|ontology_enrichment_celltype_v019_2=CL:0000838,1.02e-12,12;CL:0000542,1.37e-11,13;CL:0000051,1.37e-11,13;CL:0000084,1.78e-11,11;CL:0000827,1.78e-11,11;CL:0000791,2.42e-11,9;CL:0000789,2.42e-11,9;CL:0002420,2.42e-11,9;CL:0002419,2.42e-11,9;CL:0000790,2.42e-11,9;CL:0000988,6.61e-11,32;CL:0002032,6.61e-11,32;CL:0000037,6.61e-11,32;CL:0000837,6.61e-11,32;CL:0000624,1.72e-09,8;CL:0000738,2.07e-08,17;CL:0002087,2.07e-08,17;CL:0002320,1.47e-07,46;CL:0000134,1.47e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!1.96e-07!42;UBERON:0000065!3.17e-07!41;UBERON:0000475!5.68e-07!200;UBERON:0004177!9.14e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.47e-07,46;UBERON:0004177,3.07e-07,29;UBERON:0005057,3.07e-07,29|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0.16787927191189,0,2.7115897922731,0.985521055061667,1.63845168425395,0.171217968225505,1.03703806693937,3.42401459862411,2.62261207256992,0.999329285446988,0.404950534779652,0,0.946386496074713,0.822686601634433,0,0.340173160604279,1.09220046320974,0.522399578277871,0.319984845586813,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0,0.332469290716985,0,0.837063261473815,0.7813353445238,0,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,1.00669563634642,5.07753499407941,2.01656279485478,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.311068836925433,1.08004750665353,0.630974884054146,1.71390590642282,0.662605622854841,0.244981598429908,0.670918297127655,0,0,0.255374676170375,0.153606533256243,1.18697658957174,1.00636407962651,1.04182674111352,0.558365998002762,0.56276261003168,0.30559649555362,0,0.284743361598206,0.931997229126503,0.151452386666368,0,0,0,0,0,1.29955283489534,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0.593768556259299,0.173485326766136,0,0,0.60289056221049,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0.323533699894818,1.76673214768315,0.484875253135222,0,1.46390398505774,0.209446706813455,0,1.31796636956512,0,1.27070227073065,0.299581278809645,0,1.00523481690292,0.695297280769106,1.27857728665165,0.83115217823824,0,0.101839363850316,0.373220911830279,0.758168275301024,0.841767423545896,0.520481771850815,0,0,0.150704817835715,0.95251098811859,0.640568601424249,1.12442069471675,1.03481348295606,0.431135985865684,0.378212160335639,0.527853372491847,0.219195732427575,0,0,0,0,1.40442637462647,1.02939162845886,1.70498099637356,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0.697601834251224,0.268273401399619,0.233530684734339,0,0.32833492815819,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0.823236899034275,0,0,0,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0.569003702859245,0.228497025219458,0,0.203651327845314,0.775809948670503,0.771494018793504,0.189709611372772,0.295220295959204,0.470996183524124,0.987177311374404,0,0,0.982794975566015,0.449724224769707,0.405720242777006,1.4470629585145,0.25462585178142,0.287696137450811,0.810676133875177,0,0,0.372140947668503,0.624075346229121,0.252578877947112,0,0.482443521363367,0.923765950833023,0.568474235311454,0.488894929326078,0.509235257325564,0.704070744865506,1.00503754465089,0.952174563544055,0.390267295715598,1.41871629695572,1.55025282754142,1.43509291791738,1.14704320301017,0.863424909329478,0.723245292907558,0,0,0,0,0.642202359951168,0.35163505977661,0,0.757412781613119,0.631016438832513,0,0.215423397732799,0.477937595905104,0.222798674082394,0.566153061577665,0,0.292255857911312,0,0.642642632843614,0.425820255624806,0,0.162886959353576,0,0,0.242780636154981,0.604647113929502,0.377210159511796,0.590603785761546,0.922305443831782,0.775284879504663,0,0,0.316036757935816,1.05418608574999,0,0,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0.164549020602121,0.608929898229199,0.23467170806371,0,0,0.8244312647074,0.484393280087717,0.482503399425247,0.835606408021955,0.492422699235184,0,0.370850604021019,1.19609616558497,0.412773735926445,0.185194527369712,1.31857919903284,1.23024804948923,0.915112692826091,0.339956859987711,1.25956307091292,0.690999869022119,0,0.632671987162271,0.406638934253697,0.108005340821801,0.418176592028937,0,0,0.247960367176008,0,0.388844919875379,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0.314578033277133,0.241584120826006,0.288030006257865,1.89606672376907,1.01362607645082,0.308132871494482,0.51968329191118,0.716106782669926,0.39736270956253,0.961563596159751,1.03382669022204,0.605798699688886,0.914481679859998,1.51239277705261,0.487289403698762,0.384847366561318,1.05189211963412,0,0,0,0.167884616364078,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.859265911718438,0,0.755393897389701,1.35004500046361,0.45032120322422,0,0,0.103787347584177,0.399024873401031,1.02440163452481,0.972426868273176,0.419226325255965,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.576226371643824,0.516919220600519,0.476293691283074,0.115884325944855,0,1.23625770240992,0.441596760403192,0.342869252385415,0.354951612318675,0,0.145346416632329,0.282328141245992,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0.711810108745045,0.0985044823755635,0,0.464810523557898,0.192906610981141,0.499621155875892,0,1.07435527024149,0.191288332068843,1.32354851471709,0.231867835620421|short_description=p3@Nup210}} | ||
|EntrezGene=54563 | |||
|HGNC= | |||
|UniProt=Q9QY81 | |||
|association_with_transcript=-179bp_to_ENSMUST00000032179_5end | |||
|description=CAGE_peak_3_at_Nup210_5end | |||
|id=chr6:91067002..91067017,- | |||
|ontology_enrichment_celltype=CL:0000838!7.01e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.02e-12,12;CL:0000542,1.37e-11,13;CL:0000051,1.37e-11,13;CL:0000084,1.78e-11,11;CL:0000827,1.78e-11,11;CL:0000791,2.42e-11,9;CL:0000789,2.42e-11,9;CL:0002420,2.42e-11,9;CL:0002419,2.42e-11,9;CL:0000790,2.42e-11,9;CL:0000988,6.61e-11,32;CL:0002032,6.61e-11,32;CL:0000037,6.61e-11,32;CL:0000837,6.61e-11,32;CL:0000624,1.72e-09,8;CL:0000738,2.07e-08,17;CL:0002087,2.07e-08,17;CL:0002320,1.47e-07,46;CL:0000134,1.47e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.96e-07!42;UBERON:0000065!3.17e-07!41;UBERON:0000475!5.68e-07!200;UBERON:0004177!9.14e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.47e-07,46;UBERON:0004177,3.07e-07,29;UBERON:0005057,3.07e-07,29 | |||
|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0.16787927191189,0,2.7115897922731,0.985521055061667,1.63845168425395,0.171217968225505,1.03703806693937,3.42401459862411,2.62261207256992,0.999329285446988,0.404950534779652,0,0.946386496074713,0.822686601634433,0,0.340173160604279,1.09220046320974,0.522399578277871,0.319984845586813,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0,0.332469290716985,0,0.837063261473815,0.7813353445238,0,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,1.00669563634642,5.07753499407941,2.01656279485478,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.311068836925433,1.08004750665353,0.630974884054146,1.71390590642282,0.662605622854841,0.244981598429908,0.670918297127655,0,0,0.255374676170375,0.153606533256243,1.18697658957174,1.00636407962651,1.04182674111352,0.558365998002762,0.56276261003168,0.30559649555362,0,0.284743361598206,0.931997229126503,0.151452386666368,0,0,0,0,0,1.29955283489534,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0.593768556259299,0.173485326766136,0,0,0.60289056221049,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0.323533699894818,1.76673214768315,0.484875253135222,0,1.46390398505774,0.209446706813455,0,1.31796636956512,0,1.27070227073065,0.299581278809645,0,1.00523481690292,0.695297280769106,1.27857728665165,0.83115217823824,0,0.101839363850316,0.373220911830279,0.758168275301024,0.841767423545896,0.520481771850815,0,0,0.150704817835715,0.95251098811859,0.640568601424249,1.12442069471675,1.03481348295606,0.431135985865684,0.378212160335639,0.527853372491847,0.219195732427575,0,0,0,0,1.40442637462647,1.02939162845886,1.70498099637356,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0.697601834251224,0.268273401399619,0.233530684734339,0,0.32833492815819,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0.823236899034275,0,0,0,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0.569003702859245,0.228497025219458,0,0.203651327845314,0.775809948670503,0.771494018793504,0.189709611372772,0.295220295959204,0.470996183524124,0.987177311374404,0,0,0.982794975566015,0.449724224769707,0.405720242777006,1.4470629585145,0.25462585178142,0.287696137450811,0.810676133875177,0,0,0.372140947668503,0.624075346229121,0.252578877947112,0,0.482443521363367,0.923765950833023,0.568474235311454,0.488894929326078,0.509235257325564,0.704070744865506,1.00503754465089,0.952174563544055,0.390267295715598,1.41871629695572,1.55025282754142,1.43509291791738,1.14704320301017,0.863424909329478,0.723245292907558,0,0,0,0,0.642202359951168,0.35163505977661,0,0.757412781613119,0.631016438832513,0,0.215423397732799,0.477937595905104,0.222798674082394,0.566153061577665,0,0.292255857911312,0,0.642642632843614,0.425820255624806,0,0.162886959353576,0,0,0.242780636154981,0.604647113929502,0.377210159511796,0.590603785761546,0.922305443831782,0.775284879504663,0,0,0.316036757935816,1.05418608574999,0,0,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0.164549020602121,0.608929898229199,0.23467170806371,0,0,0.8244312647074,0.484393280087717,0.482503399425247,0.835606408021955,0.492422699235184,0,0.370850604021019,1.19609616558497,0.412773735926445,0.185194527369712,1.31857919903284,1.23024804948923,0.915112692826091,0.339956859987711,1.25956307091292,0.690999869022119,0,0.632671987162271,0.406638934253697,0.108005340821801,0.418176592028937,0,0,0.247960367176008,0,0.388844919875379,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0.314578033277133,0.241584120826006,0.288030006257865,1.89606672376907,1.01362607645082,0.308132871494482,0.51968329191118,0.716106782669926,0.39736270956253,0.961563596159751,1.03382669022204,0.605798699688886,0.914481679859998,1.51239277705261,0.487289403698762,0.384847366561318,1.05189211963412,0,0,0,0.167884616364078,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.859265911718438,0,0.755393897389701,1.35004500046361,0.45032120322422,0,0,0.103787347584177,0.399024873401031,1.02440163452481,0.972426868273176,0.419226325255965,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.576226371643824,0.516919220600519,0.476293691283074,0.115884325944855,0,1.23625770240992,0.441596760403192,0.342869252385415,0.354951612318675,0,0.145346416632329,0.282328141245992,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0.711810108745045,0.0985044823755635,0,0.464810523557898,0.192906610981141,0.499621155875892,0,1.07435527024149,0.191288332068843,1.32354851471709,0.231867835620421 | |||
|short_description=p3@Nup210 | |||
}} |
Revision as of 10:58, 14 September 2013
Short description: | p3@Nup210 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nup210_5end |
Coexpression cluster: | NA |
Association with transcript: | -179bp_to_ENSMUST00000032179_5end |
EntrezGene: | Nup210 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.02e-12 | 12 |
lymphocyte | 1.37e-11 | 13 |
common lymphoid progenitor | 1.37e-11 | 13 |
T cell | 1.78e-11 | 11 |
pro-T cell | 1.78e-11 | 11 |
mature alpha-beta T cell | 2.42e-11 | 9 |
alpha-beta T cell | 2.42e-11 | 9 |
immature T cell | 2.42e-11 | 9 |
mature T cell | 2.42e-11 | 9 |
immature alpha-beta T cell | 2.42e-11 | 9 |
hematopoietic cell | 6.61e-11 | 32 |
hematopoietic oligopotent progenitor cell | 6.61e-11 | 32 |
hematopoietic stem cell | 6.61e-11 | 32 |
hematopoietic multipotent progenitor cell | 6.61e-11 | 32 |
CD4-positive, alpha-beta T cell | 1.72e-09 | 8 |
leukocyte | 2.07e-08 | 17 |
nongranular leukocyte | 2.07e-08 | 17 |
connective tissue cell | 1.47e-07 | 46 |
mesenchymal cell | 1.47e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.47e-07 | 46 |
hemopoietic organ | 3.07e-07 | 29 |
immune organ | 3.07e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.