FFCP PHASE1:Mm9::chr17:88511949..88511988,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=169|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:88511949..88511988,+|id=chr17:88511949..88511988,+|ontology_enrichment_celltype=CL:0000988!9.63e-30!32;CL:0002032!9.63e-30!32;CL:0000037!9.63e-30!32;CL:0000566!9.63e-30!32;CL:0000837!9.63e-30!32;CL:0002320!1.26e-19!46;CL:0000134!1.26e-19!46;CL:0000219!3.41e-16!54;CL:0002031!4.25e-16!25;CL:0000049!5.92e-16!19;CL:0000838!6.22e-16!12;CL:0000034!1.67e-15!97;CL:0000542!1.27e-14!13;CL:0000051!1.27e-14!13;CL:0000084!3.88e-13!11;CL:0000827!3.88e-13!11;CL:0000063!1.32e-12!66;CL:0000723!4.98e-12!91;CL:0000048!4.98e-12!91;CL:0000144!1.51e-11!121;CL:0000012!1.51e-11!121;CL:0000738!6.45e-11!17;CL:0002087!6.45e-11!17;CL:0000624!8.26e-10!8;CL:0000763!2.79e-09!16;CL:0000893!1.01e-08!6;CL:0002489!1.01e-08!6;CL:0000898!1.01e-08!6;CL:0000809!1.01e-08!6;CL:0000810!1.01e-08!6;CL:0000895!1.01e-08!6;CL:0000808!1.01e-08!6;CL:0000894!1.01e-08!6;CL:0000806!1.01e-08!6;CL:0000807!1.01e-08!6;CL:0000805!1.01e-08!6;CL:0002425!1.01e-08!6;CL:0002436!1.01e-08!6;CL:0002427!1.01e-08!6;CL:0002428!1.01e-08!6;CL:0002429!1.01e-08!6;CL:0002433!1.01e-08!6;CL:0002431!1.01e-08!6;CL:0002432!1.01e-08!6;CL:0000791!1.07e-08!9;CL:0000789!1.07e-08!9;CL:0002420!1.07e-08!9;CL:0002419!1.07e-08!9;CL:0000790!1.07e-08!9;CL:0000553!1.28e-08!6;CL:0000556!1.28e-08!6;CL:0002371!2.42e-08!118|ontology_enrichment_celltype_v019_2=CL:0000988,7.74e-18,32;CL:0002032,7.74e-18,32;CL:0000037,7.74e-18,32;CL:0000837,7.74e-18,32;CL:0000049,2.04e-17,19;CL:0002320,7.82e-12,46;CL:0000134,7.82e-12,46;CL:0000034,1.35e-10,97;CL:0000219,8.53e-10,54;CL:0000763,2.68e-09,16;CL:0000723,2.99e-07,91;CL:0000048,2.99e-07,91;CL:0000553,9.37e-07,6;CL:0000556,9.37e-07,6|ontology_enrichment_disease=DOID:0060100!8.08e-11!3;DOID:4045!8.08e-11!3|ontology_enrichment_disease_v019_2=DOID:0060100,4.26e-07,3;DOID:4045,4.26e-07,3|ontology_enrichment_uberon=UBERON:0002384!1.26e-19!46;UBERON:0002371!2.79e-09!16;UBERON:0002204!1.09e-08!32;UBERON:0002390!8.39e-07!45;UBERON:0003061!8.39e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.82e-12,46;UBERON:0002371,2.68e-09,16;UBERON:0002204,8.48e-08,32|phase1_expression=0,0,0,0,0,0,0,0.903863264091034,1.267098499365,0.70219357896598,1.88339765048055,0.8774937489487,0,0,0,0.202475267389826,0,1.26184866143295,1.09691546884591,1.27316895539409,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,3.1253413780952,0.523523743973798,9.99993529652724,6.83045484958446,2.42755176515577,0,0,0,0,0,0,0,0,0,4.53013036355888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71426885968353,2.99951365496704,1.90605340609597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21327912387941,3.08817488537658,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03974115992626,4.61839792668071,1.65839968565309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:88511949..88511988,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=169 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:88511949..88511988,+ | |||
|id=chr17:88511949..88511988,+ | |||
|ontology_enrichment_celltype=CL:0000988!9.63e-30!32;CL:0002032!9.63e-30!32;CL:0000037!9.63e-30!32;CL:0000566!9.63e-30!32;CL:0000837!9.63e-30!32;CL:0002320!1.26e-19!46;CL:0000134!1.26e-19!46;CL:0000219!3.41e-16!54;CL:0002031!4.25e-16!25;CL:0000049!5.92e-16!19;CL:0000838!6.22e-16!12;CL:0000034!1.67e-15!97;CL:0000542!1.27e-14!13;CL:0000051!1.27e-14!13;CL:0000084!3.88e-13!11;CL:0000827!3.88e-13!11;CL:0000063!1.32e-12!66;CL:0000723!4.98e-12!91;CL:0000048!4.98e-12!91;CL:0000144!1.51e-11!121;CL:0000012!1.51e-11!121;CL:0000738!6.45e-11!17;CL:0002087!6.45e-11!17;CL:0000624!8.26e-10!8;CL:0000763!2.79e-09!16;CL:0000893!1.01e-08!6;CL:0002489!1.01e-08!6;CL:0000898!1.01e-08!6;CL:0000809!1.01e-08!6;CL:0000810!1.01e-08!6;CL:0000895!1.01e-08!6;CL:0000808!1.01e-08!6;CL:0000894!1.01e-08!6;CL:0000806!1.01e-08!6;CL:0000807!1.01e-08!6;CL:0000805!1.01e-08!6;CL:0002425!1.01e-08!6;CL:0002436!1.01e-08!6;CL:0002427!1.01e-08!6;CL:0002428!1.01e-08!6;CL:0002429!1.01e-08!6;CL:0002433!1.01e-08!6;CL:0002431!1.01e-08!6;CL:0002432!1.01e-08!6;CL:0000791!1.07e-08!9;CL:0000789!1.07e-08!9;CL:0002420!1.07e-08!9;CL:0002419!1.07e-08!9;CL:0000790!1.07e-08!9;CL:0000553!1.28e-08!6;CL:0000556!1.28e-08!6;CL:0002371!2.42e-08!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.74e-18,32;CL:0002032,7.74e-18,32;CL:0000037,7.74e-18,32;CL:0000837,7.74e-18,32;CL:0000049,2.04e-17,19;CL:0002320,7.82e-12,46;CL:0000134,7.82e-12,46;CL:0000034,1.35e-10,97;CL:0000219,8.53e-10,54;CL:0000763,2.68e-09,16;CL:0000723,2.99e-07,91;CL:0000048,2.99e-07,91;CL:0000553,9.37e-07,6;CL:0000556,9.37e-07,6 | |||
|ontology_enrichment_disease=DOID:0060100!8.08e-11!3;DOID:4045!8.08e-11!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.26e-07,3;DOID:4045,4.26e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.26e-19!46;UBERON:0002371!2.79e-09!16;UBERON:0002204!1.09e-08!32;UBERON:0002390!8.39e-07!45;UBERON:0003061!8.39e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.82e-12,46;UBERON:0002371,2.68e-09,16;UBERON:0002204,8.48e-08,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0.903863264091034,1.267098499365,0.70219357896598,1.88339765048055,0.8774937489487,0,0,0,0.202475267389826,0,1.26184866143295,1.09691546884591,1.27316895539409,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,3.1253413780952,0.523523743973798,9.99993529652724,6.83045484958446,2.42755176515577,0,0,0,0,0,0,0,0,0,4.53013036355888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71426885968353,2.99951365496704,1.90605340609597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21327912387941,3.08817488537658,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03974115992626,4.61839792668071,1.65839968565309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:88511949..88511988,+ | |||
}} |
Revision as of 15:36, 13 September 2013
Short description: | p@chr17:88511949..88511988, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:88511949..88511988, + |
Coexpression cluster: | MCL_coexpression_mm9:169 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.74e-18 | 32 |
hematopoietic oligopotent progenitor cell | 7.74e-18 | 32 |
hematopoietic stem cell | 7.74e-18 | 32 |
hematopoietic multipotent progenitor cell | 7.74e-18 | 32 |
common myeloid progenitor | 2.04e-17 | 19 |
connective tissue cell | 7.82e-12 | 46 |
mesenchymal cell | 7.82e-12 | 46 |
stem cell | 1.35e-10 | 97 |
motile cell | 8.53e-10 | 54 |
myeloid cell | 2.68e-09 | 16 |
somatic stem cell | 2.99e-07 | 91 |
multi fate stem cell | 2.99e-07 | 91 |
megakaryocyte progenitor cell | 9.37e-07 | 6 |
megakaryocyte | 9.37e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.82e-12 | 46 |
bone marrow | 2.68e-09 | 16 |
musculoskeletal system | 8.48e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.26e-07 | 3 |
muscle cancer | 4.26e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.