FFCP PHASE1:Mm9::chr18:7346008..7346012,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=370|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:7346008..7346012,-|id=chr18:7346008..7346012,-|ontology_enrichment_celltype=CL:0000393!6.08e-15!39;CL:0000211!6.08e-15!39;CL:0000540!8.02e-15!33;CL:0000047!8.02e-15!33;CL:0000031!8.02e-15!33;CL:0000404!8.02e-15!33;CL:0002319!2.75e-14!43;CL:0000055!6.66e-14!50;CL:0000221!1.90e-13!44;CL:0000133!1.90e-13!44;CL:0000117!5.78e-13!23;CL:0000337!5.78e-13!23;CL:0002321!5.03e-11!70;CL:0000220!5.03e-11!70;CL:0000723!7.91e-11!91;CL:0000048!7.91e-11!91;CL:0000034!3.04e-10!97;CL:0000548!4.90e-10!115;CL:0000004!4.90e-10!115;CL:0000255!4.90e-10!115;CL:0002371!6.25e-09!118;CL:0000144!6.45e-08!121;CL:0000012!6.45e-08!121|ontology_enrichment_celltype_v019_2=CL:0000117,3.31e-24,23;CL:0000337,3.31e-24,23;CL:0000540,1.50e-20,33;CL:0000047,1.50e-20,33;CL:0000031,1.50e-20,33;CL:0000404,1.50e-20,33;CL:0000393,7.48e-18,39;CL:0000211,7.48e-18,39;CL:0002319,3.88e-17,43;CL:0000221,1.38e-16,44;CL:0000133,1.38e-16,44;CL:0000034,2.72e-15,97;CL:0000723,6.79e-15,91;CL:0000048,6.79e-15,91;CL:0002321,5.52e-13,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.90e-14!73;UBERON:0005743!2.90e-14!73;UBERON:0002020!8.81e-14!34;UBERON:0000073!1.17e-13!75;UBERON:0001016!1.17e-13!75;UBERON:0002791!2.81e-11!29;UBERON:0003528!2.81e-11!29;UBERON:0001893!2.81e-11!29;UBERON:0004121!1.76e-10!102;UBERON:0000924!1.76e-10!102;UBERON:0006601!1.76e-10!102;UBERON:0000956!3.11e-10!21;UBERON:0001869!3.11e-10!21;UBERON:0000203!3.11e-10!21;UBERON:0002346!1.17e-09!71;UBERON:0003075!1.17e-09!71;UBERON:0007284!1.17e-09!71;UBERON:0001049!1.56e-09!52;UBERON:0005068!1.56e-09!52;UBERON:0006241!1.56e-09!52;UBERON:0007135!1.56e-09!52;UBERON:0002619!6.04e-09!17;UBERON:0002616!1.14e-08!49;UBERON:0003080!2.68e-08!40;UBERON:0002780!3.50e-08!39;UBERON:0001890!3.50e-08!39;UBERON:0006240!3.50e-08!39;UBERON:0000955!3.94e-08!50;UBERON:0006238!3.94e-08!50;UBERON:0002021!5.24e-08!10;UBERON:0000411!5.24e-08!10;UBERON:0001950!5.24e-08!10;UBERON:0003056!1.30e-07!49;UBERON:0000153!2.83e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.85e-28,34;UBERON:0003528,2.42e-22,29;UBERON:0002791,2.42e-22,29;UBERON:0001893,2.42e-22,29;UBERON:0001017,1.61e-20,73;UBERON:0000073,2.10e-20,54;UBERON:0001016,1.07e-19,75;UBERON:0000956,1.96e-17,21;UBERON:0001869,1.96e-17,21;UBERON:0000203,1.96e-17,21;UBERON:0002619,3.70e-17,17;UBERON:0001049,6.39e-17,52;UBERON:0005068,6.39e-17,52;UBERON:0006241,6.39e-17,52;UBERON:0007135,6.39e-17,52;UBERON:0002021,1.15e-16,10;UBERON:0000411,1.15e-16,10;UBERON:0001950,1.15e-16,10;UBERON:0002780,2.48e-16,39;UBERON:0001890,2.48e-16,39;UBERON:0006240,2.48e-16,39;UBERON:0003080,9.32e-16,40;UBERON:0002346,1.77e-13,64;UBERON:0003075,1.77e-13,64;UBERON:0007284,1.77e-13,64;UBERON:0004121,1.96e-13,95;UBERON:0000924,1.96e-13,95;UBERON:0006601,1.96e-13,95;UBERON:0002616,7.51e-13,46;UBERON:0000955,1.93e-12,47;UBERON:0006238,1.93e-12,47;UBERON:0003056,1.13e-11,49;UBERON:0010371,7.54e-11,73;UBERON:0010314,9.85e-08,92;UBERON:0001948,4.51e-07,5;UBERON:0002315,4.51e-07,5;UBERON:0000025,8.73e-07,114|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0,0.233612640595526,0,0.985521055061667,0.468129052643987,0.856089841127525,0.398860794976682,0.171200729931206,0.174840804837995,2.99798785634096,0.809901069559304,1.39912375625629,0.473193248037357,1.09691546884591,0,0.0850432901510698,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,16.5107975099504,4.92051830067656,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.101376931219515,0.183546752161682,0.782391344348039,0.872100625521786,0.219686182734472,1.36100929351998,1.81982348112971,0,0.335565212115473,1.45072428402269,0,0.771778308107841,1.14613375975503,0.515672092277442,2.02316460859598,5.28990979272033,0.633831403506179,1.69422266034566,0.889294796111139,0.449949858640699,1.97773272513395,2.1314403448383,0.599200221036809,0.384218305321555,0.933206510776299,2.70011876663381,2.3135745748652,1.42825492201902,1.98781686856452,2.9397791811589,1.34183659425531,7.35375029288017,1.10115880999389,2.042997409363,2.76491759861238,3.42904348098504,1.64677758484337,1.04182674111352,1.67509799400829,2.25105044012672,2.29197371665215,2.65165726926301,1.70846016958924,1.1183966749518,0.075726193333184,0.151143120213571,0.289864488701678,0,2.719885334831,1.61910957491345,4.54843492213368,5.37632264516803,0,0,0.519572009205738,0.35333957451034,0,0,0,0,0.649473123033642,0.760079596425296,0.505524445014783,0,0,0.445326417194474,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0.23517741427141,0,0,0,2.65383165584962,0,0.220841518460394,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0.449371918214468,0,0,0.347648640384553,0,0,0,0,0.373220911830279,0.252722758433675,0,0.910843100738926,0,0.360124259610698,0.30140963567143,0.340182495756639,0.2562274405697,0.281105173679186,0.776110112217047,0.215567992932842,0.567318240503458,0.879755620819744,0.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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=370 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:7346008..7346012,- | |||
|id=chr18:7346008..7346012,- | |||
|ontology_enrichment_celltype=CL:0000393!6.08e-15!39;CL:0000211!6.08e-15!39;CL:0000540!8.02e-15!33;CL:0000047!8.02e-15!33;CL:0000031!8.02e-15!33;CL:0000404!8.02e-15!33;CL:0002319!2.75e-14!43;CL:0000055!6.66e-14!50;CL:0000221!1.90e-13!44;CL:0000133!1.90e-13!44;CL:0000117!5.78e-13!23;CL:0000337!5.78e-13!23;CL:0002321!5.03e-11!70;CL:0000220!5.03e-11!70;CL:0000723!7.91e-11!91;CL:0000048!7.91e-11!91;CL:0000034!3.04e-10!97;CL:0000548!4.90e-10!115;CL:0000004!4.90e-10!115;CL:0000255!4.90e-10!115;CL:0002371!6.25e-09!118;CL:0000144!6.45e-08!121;CL:0000012!6.45e-08!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.31e-24,23;CL:0000337,3.31e-24,23;CL:0000540,1.50e-20,33;CL:0000047,1.50e-20,33;CL:0000031,1.50e-20,33;CL:0000404,1.50e-20,33;CL:0000393,7.48e-18,39;CL:0000211,7.48e-18,39;CL:0002319,3.88e-17,43;CL:0000221,1.38e-16,44;CL:0000133,1.38e-16,44;CL:0000034,2.72e-15,97;CL:0000723,6.79e-15,91;CL:0000048,6.79e-15,91;CL:0002321,5.52e-13,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.90e-14!73;UBERON:0005743!2.90e-14!73;UBERON:0002020!8.81e-14!34;UBERON:0000073!1.17e-13!75;UBERON:0001016!1.17e-13!75;UBERON:0002791!2.81e-11!29;UBERON:0003528!2.81e-11!29;UBERON:0001893!2.81e-11!29;UBERON:0004121!1.76e-10!102;UBERON:0000924!1.76e-10!102;UBERON:0006601!1.76e-10!102;UBERON:0000956!3.11e-10!21;UBERON:0001869!3.11e-10!21;UBERON:0000203!3.11e-10!21;UBERON:0002346!1.17e-09!71;UBERON:0003075!1.17e-09!71;UBERON:0007284!1.17e-09!71;UBERON:0001049!1.56e-09!52;UBERON:0005068!1.56e-09!52;UBERON:0006241!1.56e-09!52;UBERON:0007135!1.56e-09!52;UBERON:0002619!6.04e-09!17;UBERON:0002616!1.14e-08!49;UBERON:0003080!2.68e-08!40;UBERON:0002780!3.50e-08!39;UBERON:0001890!3.50e-08!39;UBERON:0006240!3.50e-08!39;UBERON:0000955!3.94e-08!50;UBERON:0006238!3.94e-08!50;UBERON:0002021!5.24e-08!10;UBERON:0000411!5.24e-08!10;UBERON:0001950!5.24e-08!10;UBERON:0003056!1.30e-07!49;UBERON:0000153!2.83e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.85e-28,34;UBERON:0003528,2.42e-22,29;UBERON:0002791,2.42e-22,29;UBERON:0001893,2.42e-22,29;UBERON:0001017,1.61e-20,73;UBERON:0000073,2.10e-20,54;UBERON:0001016,1.07e-19,75;UBERON:0000956,1.96e-17,21;UBERON:0001869,1.96e-17,21;UBERON:0000203,1.96e-17,21;UBERON:0002619,3.70e-17,17;UBERON:0001049,6.39e-17,52;UBERON:0005068,6.39e-17,52;UBERON:0006241,6.39e-17,52;UBERON:0007135,6.39e-17,52;UBERON:0002021,1.15e-16,10;UBERON:0000411,1.15e-16,10;UBERON:0001950,1.15e-16,10;UBERON:0002780,2.48e-16,39;UBERON:0001890,2.48e-16,39;UBERON:0006240,2.48e-16,39;UBERON:0003080,9.32e-16,40;UBERON:0002346,1.77e-13,64;UBERON:0003075,1.77e-13,64;UBERON:0007284,1.77e-13,64;UBERON:0004121,1.96e-13,95;UBERON:0000924,1.96e-13,95;UBERON:0006601,1.96e-13,95;UBERON:0002616,7.51e-13,46;UBERON:0000955,1.93e-12,47;UBERON:0006238,1.93e-12,47;UBERON:0003056,1.13e-11,49;UBERON:0010371,7.54e-11,73;UBERON:0010314,9.85e-08,92;UBERON:0001948,4.51e-07,5;UBERON:0002315,4.51e-07,5;UBERON:0000025,8.73e-07,114 | |||
|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0,0.233612640595526,0,0.985521055061667,0.468129052643987,0.856089841127525,0.398860794976682,0.171200729931206,0.174840804837995,2.99798785634096,0.809901069559304,1.39912375625629,0.473193248037357,1.09691546884591,0,0.0850432901510698,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,16.5107975099504,4.92051830067656,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.101376931219515,0.183546752161682,0.782391344348039,0.872100625521786,0.219686182734472,1.36100929351998,1.81982348112971,0,0.335565212115473,1.45072428402269,0,0.771778308107841,1.14613375975503,0.515672092277442,2.02316460859598,5.28990979272033,0.633831403506179,1.69422266034566,0.889294796111139,0.449949858640699,1.97773272513395,2.1314403448383,0.599200221036809,0.384218305321555,0.933206510776299,2.70011876663381,2.3135745748652,1.42825492201902,1.98781686856452,2.9397791811589,1.34183659425531,7.35375029288017,1.10115880999389,2.042997409363,2.76491759861238,3.42904348098504,1.64677758484337,1.04182674111352,1.67509799400829,2.25105044012672,2.29197371665215,2.65165726926301,1.70846016958924,1.1183966749518,0.075726193333184,0.151143120213571,0.289864488701678,0,2.719885334831,1.61910957491345,4.54843492213368,5.37632264516803,0,0,0.519572009205738,0.35333957451034,0,0,0,0,0.649473123033642,0.760079596425296,0.505524445014783,0,0,0.445326417194474,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0.23517741427141,0,0,0,2.65383165584962,0,0.220841518460394,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0.449371918214468,0,0,0.347648640384553,0,0,0,0,0.373220911830279,0.252722758433675,0,0.910843100738926,0,0.360124259610698,0.30140963567143,0.340182495756639,0.2562274405697,0.281105173679186,0.776110112217047,0.215567992932842,0.567318240503458,0.879755620819744,0.876782929710299,0.556094498451196,1.0447564995665,0.205782136407943,0,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.162137619091711,0.292399974850665,0,0,0.420579897128254,0.205809224758569,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0,0,0.397912944082302,0,0.898819408654221,0,0,1.13800740571849,0.456994050438915,0,0.203651327845314,0.193952487167626,0.210407459670956,0.0632365371242573,0.147610147979602,0.31399745568275,0.123397163921801,0.296452627087149,0,0,0.224862112384854,0,0.482354319504834,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.936113019343682,0,0.358794827043824,0,0.369506380333209,0,0.162964976442026,0.339490171550376,0.469380496577004,0,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0,0.631016438832513,0.780877488593277,2.58508077279359,0.955875191810208,1.33679204449436,0.849229592366497,0.809621403349789,2.63030272120181,0.395287777946524,0,0.567760340833074,0,0.162886959353576,0.989820737835213,0,0.485561272309963,0.302323556964751,0.377210159511796,0,0,0.516856586336442,0,0,0,0,0,0,1.08036656418786,0.517434735131018,0.643011105094777,0.354680467284547,0,0,0.304464949114599,0,0.42366414172764,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,0.291480836629851,0.370850604021019,0.341741761595705,0.206386867963223,0,0.753473828018764,0,0.228778173206523,0,0,0,0,1.10717597753397,0,0.432021363287205,0.209088296014469,0.436725127492355,0,0,0,0,0.621339313086926,0.56369293868419,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0.234714477291508,0.39061315453185,0.209718688851422,0.241584120826006,0.288030006257865,1.26404448251271,0,0.616265742988964,0.25984164595559,0.358053391334963,0,0.480781798079875,0.443068581523732,0.605798699688886,0.228620419965,0.302478555410522,0.38983152295901,0.384847366561318,0.467507608726276,0,1.33191572024439,0.269141569828427,1.34307693091263,0,0,0.36630324853453,0.214368379079066,0,4.51801474093653,4.14292712856459,4.58316410751517,4.1244763762485,4.11049511862385,10.5755145634558,4.05013500139084,3.15224842256954,3.17199686288943,5.1776031175182,0.518936737920883,5.98537310101547,0.512200817262403,0,0.419226325255965,0,0.666740183404846,0,0,0.758091635291392,1.2673964994512,0,0.37456602987953,0.576226371643824,0.0574354689556133,0,0.231768651889711,0.192909220463705,6.1812885120496,0.441596760403192,0.342869252385415,0,0.238436189947321,0.436039249896986,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0,0.818462086339379,0.464810523557898,0.385813221962283,0.249810577937946,0.701794825336225,0,0,0,0.463735671240843 | |||
|short_description=p@chr18:7346008..7346012,- | |||
}} |
Revision as of 16:42, 13 September 2013
Short description: | p@chr18:7346008..7346012, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:7346008..7346012, - |
Coexpression cluster: | MCL_coexpression_mm9:370 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.31e-24 | 23 |
neuroblast (sensu Vertebrata) | 3.31e-24 | 23 |
neuron | 1.50e-20 | 33 |
neuronal stem cell | 1.50e-20 | 33 |
neuroblast | 1.50e-20 | 33 |
electrically signaling cell | 1.50e-20 | 33 |
electrically responsive cell | 7.48e-18 | 39 |
electrically active cell | 7.48e-18 | 39 |
neural cell | 3.88e-17 | 43 |
ectodermal cell | 1.38e-16 | 44 |
neurectodermal cell | 1.38e-16 | 44 |
stem cell | 2.72e-15 | 97 |
somatic stem cell | 6.79e-15 | 91 |
multi fate stem cell | 6.79e-15 | 91 |
embryonic cell | 5.52e-13 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.