FFCP PHASE1:Mm9::chr1:173090554..173090565,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=560|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:173090554..173090565,+|id=chr1:173090554..173090565,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002611,4.09e-16,2;CL:0002612,1.02e-10,3;CL:0000710,1.47e-08,1;CL:0002077,1.47e-08,1;CL:0005014,1.47e-08,1;CL:0002315,1.47e-08,1;CL:0002490,1.47e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!1.61e-13!23;UBERON:0002240!1.21e-08!6;UBERON:0005174!1.21e-08!6;UBERON:0001137!1.21e-08!6;UBERON:0000075!5.82e-08!6;UBERON:0001948!5.53e-07!5;UBERON:0002315!5.53e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.14e-30,6;UBERON:0005174,1.14e-30,6;UBERON:0001137,1.14e-30,6;UBERON:0001948,4.28e-24,5;UBERON:0002315,4.28e-24,5;UBERON:0002256,4.09e-16,2;UBERON:0003076,2.10e-15,12;UBERON:0003057,2.10e-15,12;UBERON:0002257,1.02e-10,3;UBERON:0000489,8.22e-09,21|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14216082844184,10.6016899656774,0,0,0,0,0,0,0,0,0,0,0,0,1.17851434189467,4.41352210477219,0,3.71058347332602,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0,0,0,2.39433813620357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352766121407114,0,0,0.289198713839823,0,0.970601099684455,1.10420759230197,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.187403449119458,1.81092359517311,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.478364305972461,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0.180938774784468,0.477489376012546,0.328281799490123,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0.859484216193193,2.67803664896381,4.19123696327079,5.79669589051054|short_description=p@chr1:173090554..173090565,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=560 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:173090554..173090565,+ | |||
|id=chr1:173090554..173090565,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,4.09e-16,2;CL:0002612,1.02e-10,3;CL:0000710,1.47e-08,1;CL:0002077,1.47e-08,1;CL:0005014,1.47e-08,1;CL:0002315,1.47e-08,1;CL:0002490,1.47e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.61e-13!23;UBERON:0002240!1.21e-08!6;UBERON:0005174!1.21e-08!6;UBERON:0001137!1.21e-08!6;UBERON:0000075!5.82e-08!6;UBERON:0001948!5.53e-07!5;UBERON:0002315!5.53e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.14e-30,6;UBERON:0005174,1.14e-30,6;UBERON:0001137,1.14e-30,6;UBERON:0001948,4.28e-24,5;UBERON:0002315,4.28e-24,5;UBERON:0002256,4.09e-16,2;UBERON:0003076,2.10e-15,12;UBERON:0003057,2.10e-15,12;UBERON:0002257,1.02e-10,3;UBERON:0000489,8.22e-09,21 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14216082844184,10.6016899656774,0,0,0,0,0,0,0,0,0,0,0,0,1.17851434189467,4.41352210477219,0,3.71058347332602,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0,0,0,2.39433813620357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352766121407114,0,0,0.289198713839823,0,0.970601099684455,1.10420759230197,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.187403449119458,1.81092359517311,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.478364305972461,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0.180938774784468,0.477489376012546,0.328281799490123,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0.859484216193193,2.67803664896381,4.19123696327079,5.79669589051054 | |||
|short_description=p@chr1:173090554..173090565,+ | |||
}} |
Revision as of 19:39, 13 September 2013
Short description: | p@chr1:173090554..173090565, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:173090554..173090565, + |
Coexpression cluster: | MCL_coexpression_mm9:560 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 4.09e-16 | 2 |
neuron of the ventral spinal cord | 1.02e-10 | 3 |
neurecto-epithelial cell | 1.47e-08 | 1 |
ecto-epithelial cell | 1.47e-08 | 1 |
auditory epithelial support cell | 1.47e-08 | 1 |
supporting cell of cochlea | 1.47e-08 | 1 |
organ of Corti supporting cell | 1.47e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.14e-30 | 6 |
dorsal region element | 1.14e-30 | 6 |
dorsum | 1.14e-30 | 6 |
regional part of spinal cord | 4.28e-24 | 5 |
gray matter of spinal cord | 4.28e-24 | 5 |
dorsal horn of spinal cord | 4.09e-16 | 2 |
posterior neural tube | 2.10e-15 | 12 |
chordal neural plate | 2.10e-15 | 12 |
ventral horn of spinal cord | 1.02e-10 | 3 |
cavitated compound organ | 8.22e-09 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.