FFCP PHASE1:Mm9::chr3:107924098..107924107,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=46|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:107924098..107924107,-|id=chr3:107924098..107924107,-|ontology_enrichment_celltype=CL:0000349!6.64e-11!3;CL:0000351!6.64e-11!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.15e-11!3;UBERON:0000478!1.15e-11!3;UBERON:0000158!1.15e-11!3;UBERON:0000160!3.38e-11!43;UBERON:0000358!6.64e-11!3;UBERON:0000307!6.64e-11!3;UBERON:0005795!1.35e-08!4;UBERON:0000995!1.35e-08!4;UBERON:0004923!1.52e-08!24;UBERON:0001987!4.34e-08!2;UBERON:0003124!4.34e-08!2;UBERON:0004340!4.34e-08!2;UBERON:0001962!4.70e-08!2;UBERON:0001961!4.70e-08!2;UBERON:0001744!4.70e-08!2;UBERON:0005409!1.69e-07!59;UBERON:0003975!5.89e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.03e-30,3;UBERON:0000478,4.03e-30,3;UBERON:0000158,4.03e-30,3;UBERON:0000305,3.06e-23,1;UBERON:0001987,3.12e-12,2;UBERON:0003124,3.12e-12,2;UBERON:0004340,3.12e-12,2;UBERON:0004923,4.63e-09,24;UBERON:0004871,1.13e-08,3;UBERON:0005795,9.17e-07,4;UBERON:0000995,9.17e-07,4|phase1_expression=0,1.04692622291808,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.45881856213434,0,0,0.430942465371778,0.760093677825496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03991400112325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,6.42706916109372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0.898819408654221,0.648414149624083,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,2.33015277950202,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.269141569828427,0.839423081820392,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:107924098..107924107,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=46 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:107924098..107924107,- | |||
|id=chr3:107924098..107924107,- | |||
|ontology_enrichment_celltype=CL:0000349!6.64e-11!3;CL:0000351!6.64e-11!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.15e-11!3;UBERON:0000478!1.15e-11!3;UBERON:0000158!1.15e-11!3;UBERON:0000160!3.38e-11!43;UBERON:0000358!6.64e-11!3;UBERON:0000307!6.64e-11!3;UBERON:0005795!1.35e-08!4;UBERON:0000995!1.35e-08!4;UBERON:0004923!1.52e-08!24;UBERON:0001987!4.34e-08!2;UBERON:0003124!4.34e-08!2;UBERON:0004340!4.34e-08!2;UBERON:0001962!4.70e-08!2;UBERON:0001961!4.70e-08!2;UBERON:0001744!4.70e-08!2;UBERON:0005409!1.69e-07!59;UBERON:0003975!5.89e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.03e-30,3;UBERON:0000478,4.03e-30,3;UBERON:0000158,4.03e-30,3;UBERON:0000305,3.06e-23,1;UBERON:0001987,3.12e-12,2;UBERON:0003124,3.12e-12,2;UBERON:0004340,3.12e-12,2;UBERON:0004923,4.63e-09,24;UBERON:0004871,1.13e-08,3;UBERON:0005795,9.17e-07,4;UBERON:0000995,9.17e-07,4 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.45881856213434,0,0,0.430942465371778,0.760093677825496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03991400112325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,6.42706916109372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0.898819408654221,0.648414149624083,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,2.33015277950202,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.269141569828427,0.839423081820392,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:107924098..107924107,- | |||
}} |
Revision as of 01:13, 14 September 2013
Short description: | p@chr3:107924098..107924107, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:107924098..107924107, - |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.03e-30 | 3 |
extraembryonic structure | 4.03e-30 | 3 |
membranous layer | 4.03e-30 | 3 |
amnion | 3.06e-23 | 1 |
placenta | 3.12e-12 | 2 |
chorion | 3.12e-12 | 2 |
allantois | 3.12e-12 | 2 |
organ component layer | 4.63e-09 | 24 |
somatic layer of lateral plate mesoderm | 1.13e-08 | 3 |
embryonic uterus | 9.17e-07 | 4 |
uterus | 9.17e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.