FFCP PHASE1:Mm9::chr5:84846323..84846334,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=13839|HGNC=|MCL_coexpression_id=1791|UniProt=Q6PFV6|association_with_transcript=49bp_to_ENSMUST00000113401_5end|description=CAGE_peak_3_at_Epha5_5end|id=chr5:84846323..84846334,-|ontology_enrichment_celltype=CL:0000117!1.93e-17!23;CL:0000337!1.93e-17!23;CL:0000540!1.16e-15!33;CL:0000047!1.16e-15!33;CL:0000031!1.16e-15!33;CL:0000404!1.16e-15!33;CL:0000221!5.95e-13!44;CL:0000133!5.95e-13!44;CL:0002319!1.05e-12!43;CL:0000393!1.94e-11!39;CL:0000211!1.94e-11!39;CL:0000055!3.15e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.65e-23,23;CL:0000337,3.65e-23,23;CL:0000540,1.13e-15,33;CL:0000047,1.13e-15,33;CL:0000031,1.13e-15,33;CL:0000404,1.13e-15,33;CL:0000393,2.62e-12,39;CL:0000211,2.62e-12,39;CL:0002319,8.41e-12,43;CL:0000221,2.17e-11,44;CL:0000133,2.17e-11,44;CL:0002609,4.53e-10,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!7.51e-34!63;UBERON:0004121!1.18e-31!102;UBERON:0000924!1.18e-31!102;UBERON:0006601!1.18e-31!102;UBERON:0002346!6.45e-31!71;UBERON:0003075!6.45e-31!71;UBERON:0007284!6.45e-31!71;UBERON:0003056!2.51e-30!49;UBERON:0001017!6.07e-30!73;UBERON:0005743!6.07e-30!73;UBERON:0000073!6.43e-30!75;UBERON:0001016!6.43e-30!75;UBERON:0000955!1.34e-26!50;UBERON:0006238!1.34e-26!50;UBERON:0001049!1.71e-26!52;UBERON:0005068!1.71e-26!52;UBERON:0006241!1.71e-26!52;UBERON:0007135!1.71e-26!52;UBERON:0002616!1.27e-25!49;UBERON:0003080!3.39e-23!40;UBERON:0002020!3.81e-23!34;UBERON:0002780!1.59e-22!39;UBERON:0001890!1.59e-22!39;UBERON:0006240!1.59e-22!39;UBERON:0002791!3.41e-20!29;UBERON:0003528!3.41e-20!29;UBERON:0001893!3.41e-20!29;UBERON:0007811!1.16e-19!86;UBERON:0000153!6.87e-19!94;UBERON:0000956!3.00e-15!21;UBERON:0001869!3.00e-15!21;UBERON:0000203!3.00e-15!21;UBERON:0002619!5.88e-12!17;UBERON:0000020!3.42e-08!12;UBERON:0001032!3.42e-08!12;UBERON:0004456!3.42e-08!12;UBERON:0000970!8.88e-08!9;UBERON:0000019!8.88e-08!9;UBERON:0000047!8.88e-08!9;UBERON:0004088!8.88e-08!9;UBERON:0002104!8.88e-08!9;UBERON:0001456!8.88e-08!9;UBERON:0003072!8.88e-08!9;UBERON:0003071!8.88e-08!9;UBERON:0004128!8.88e-08!9;UBERON:0002021!9.06e-08!10;UBERON:0000411!9.06e-08!10;UBERON:0001950!9.06e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0003056,4.66e-38,49;UBERON:0002346,2.37e-35,64;UBERON:0003075,2.37e-35,64;UBERON:0007284,2.37e-35,64;UBERON:0004121,2.33e-33,95;UBERON:0000924,2.33e-33,95;UBERON:0006601,2.33e-33,95;UBERON:0000073,6.14e-33,54;UBERON:0001016,6.75e-30,75;UBERON:0010371,1.93e-29,73;UBERON:0001017,2.05e-29,73;UBERON:0002020,1.72e-28,34;UBERON:0000955,3.35e-28,47;UBERON:0006238,3.35e-28,47;UBERON:0003080,3.77e-28,40;UBERON:0001049,5.90e-28,52;UBERON:0005068,5.90e-28,52;UBERON:0006241,5.90e-28,52;UBERON:0007135,5.90e-28,52;UBERON:0003528,4.51e-27,29;UBERON:0002791,4.51e-27,29;UBERON:0001893,4.51e-27,29;UBERON:0002780,4.65e-27,39;UBERON:0001890,4.65e-27,39;UBERON:0006240,4.65e-27,39;UBERON:0002616,9.78e-27,46;UBERON:0010314,8.67e-21,92;UBERON:0000956,2.91e-20,21;UBERON:0001869,2.91e-20,21;UBERON:0000203,2.91e-20,21;UBERON:0002619,7.97e-15,17;UBERON:0002021,1.26e-10,10;UBERON:0000411,1.26e-10,10;UBERON:0001950,1.26e-10,10;UBERON:0000970,2.11e-10,9;UBERON:0000019,2.11e-10,9;UBERON:0000047,2.11e-10,9;UBERON:0010312,2.11e-10,9;UBERON:0004088,2.11e-10,9;UBERON:0002104,2.11e-10,9;UBERON:0001456,2.11e-10,9;UBERON:0003072,2.11e-10,9;UBERON:0004128,2.11e-10,9;UBERON:0003071,2.11e-10,9;UBERON:0001444,3.53e-08,11;UBERON:0002420,7.39e-08,8;UBERON:0007245,7.39e-08,8;UBERON:0010009,7.39e-08,8;UBERON:0010011,7.39e-08,8;UBERON:0000454,7.39e-08,8;UBERON:0000025,2.24e-07,114;UBERON:0000020,2.38e-07,12;UBERON:0001032,2.38e-07,12;UBERON:0004456,2.38e-07,12|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,6.97214543856797,0,0,0,0,0,0.299600110518405,0,6.32506635081714,4.3201900266141,7.57169860864975,0.856952953211411,0.662605622854841,5.87955836231779,2.58782771749238,11.9498442259303,7.70811166995721,5.2351808614927,4.76180253094355,2.90149833006426,1.9212405156506,0.52091337055676,3.90856198601933,2.8138130501584,3.36156145108982,3.83017161115768,3.98640706237488,2.23679334990361,0,2.41828992341714,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.608930956624282,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,2.39665023047716,2.28750301409313,2.26177833803156,3.12883776346098,3.06858548796397,2.90903262383384,3.73154905055843,0,0,0,0.631325567659422,2.73252930221678,3.90833577536904,5.40186389416048,5.57607825992146,5.71506592871154,5.63700369253339,5.34099829990454,1.29351685369508,0,0.378212160335639,0,0,0.278047249225598,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,4.32199371992995,0,0,0.426576501070468,0,0,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,1.9266070798535,1.87538698547525,0,0,0,0,0.861693590931196,0.716906393857656,0.668396022247182,0.566153061577665,0,1.16902343164525,0,8.67567554338879,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,1.36175842301515,1.62054984628179,0.129358683782755,0.857348140126369,0.177340233642274,1.07021290561242,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,2.25900737046827,4.60325236507177,2.86447756719698,4.98374228796694,3.42541259885321,4.5323633843382,1.35004500046361,0.45032120322422,2.71885445390523,3.62432218226274,0.518936737920883,0.798049746802062,1.36586884603307,0.729320151204882,0.838452650511929,0.919217542250071,1.11123363900808,1.44224540067226,1.60459604795908,1.01078884705519,0.50695859978048,0.565879024158229,0.561849044819294,0.640251524048693,0.918967503289812,0,0.927074607558844,0,1.64834360321323,1.17759136107518,0.685738504770831,0.177475806159338,1.1921809497366,0.581385666529314,0.658765662907314,1.18460451048347,1.28049581010941,0.263069711437843,0.543216455383447,1.12228454331548,0.711810108745045,0.29551344712669,0,0.309873682371932,0.771626443924566,1.24905288968973,0.701794825336225,0.429742108096597,0.57386499620653,0,0|short_description=p3@Epha5}} | ||
|EntrezGene=13839 | |||
|HGNC= | |||
|MCL_coexpression_id=1791 | |||
|UniProt=Q6PFV6 | |||
|association_with_transcript=49bp_to_ENSMUST00000113401_5end | |||
|description=CAGE_peak_3_at_Epha5_5end | |||
|id=chr5:84846323..84846334,- | |||
|ontology_enrichment_celltype=CL:0000117!1.93e-17!23;CL:0000337!1.93e-17!23;CL:0000540!1.16e-15!33;CL:0000047!1.16e-15!33;CL:0000031!1.16e-15!33;CL:0000404!1.16e-15!33;CL:0000221!5.95e-13!44;CL:0000133!5.95e-13!44;CL:0002319!1.05e-12!43;CL:0000393!1.94e-11!39;CL:0000211!1.94e-11!39;CL:0000055!3.15e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.65e-23,23;CL:0000337,3.65e-23,23;CL:0000540,1.13e-15,33;CL:0000047,1.13e-15,33;CL:0000031,1.13e-15,33;CL:0000404,1.13e-15,33;CL:0000393,2.62e-12,39;CL:0000211,2.62e-12,39;CL:0002319,8.41e-12,43;CL:0000221,2.17e-11,44;CL:0000133,2.17e-11,44;CL:0002609,4.53e-10,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!7.51e-34!63;UBERON:0004121!1.18e-31!102;UBERON:0000924!1.18e-31!102;UBERON:0006601!1.18e-31!102;UBERON:0002346!6.45e-31!71;UBERON:0003075!6.45e-31!71;UBERON:0007284!6.45e-31!71;UBERON:0003056!2.51e-30!49;UBERON:0001017!6.07e-30!73;UBERON:0005743!6.07e-30!73;UBERON:0000073!6.43e-30!75;UBERON:0001016!6.43e-30!75;UBERON:0000955!1.34e-26!50;UBERON:0006238!1.34e-26!50;UBERON:0001049!1.71e-26!52;UBERON:0005068!1.71e-26!52;UBERON:0006241!1.71e-26!52;UBERON:0007135!1.71e-26!52;UBERON:0002616!1.27e-25!49;UBERON:0003080!3.39e-23!40;UBERON:0002020!3.81e-23!34;UBERON:0002780!1.59e-22!39;UBERON:0001890!1.59e-22!39;UBERON:0006240!1.59e-22!39;UBERON:0002791!3.41e-20!29;UBERON:0003528!3.41e-20!29;UBERON:0001893!3.41e-20!29;UBERON:0007811!1.16e-19!86;UBERON:0000153!6.87e-19!94;UBERON:0000956!3.00e-15!21;UBERON:0001869!3.00e-15!21;UBERON:0000203!3.00e-15!21;UBERON:0002619!5.88e-12!17;UBERON:0000020!3.42e-08!12;UBERON:0001032!3.42e-08!12;UBERON:0004456!3.42e-08!12;UBERON:0000970!8.88e-08!9;UBERON:0000019!8.88e-08!9;UBERON:0000047!8.88e-08!9;UBERON:0004088!8.88e-08!9;UBERON:0002104!8.88e-08!9;UBERON:0001456!8.88e-08!9;UBERON:0003072!8.88e-08!9;UBERON:0003071!8.88e-08!9;UBERON:0004128!8.88e-08!9;UBERON:0002021!9.06e-08!10;UBERON:0000411!9.06e-08!10;UBERON:0001950!9.06e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,4.66e-38,49;UBERON:0002346,2.37e-35,64;UBERON:0003075,2.37e-35,64;UBERON:0007284,2.37e-35,64;UBERON:0004121,2.33e-33,95;UBERON:0000924,2.33e-33,95;UBERON:0006601,2.33e-33,95;UBERON:0000073,6.14e-33,54;UBERON:0001016,6.75e-30,75;UBERON:0010371,1.93e-29,73;UBERON:0001017,2.05e-29,73;UBERON:0002020,1.72e-28,34;UBERON:0000955,3.35e-28,47;UBERON:0006238,3.35e-28,47;UBERON:0003080,3.77e-28,40;UBERON:0001049,5.90e-28,52;UBERON:0005068,5.90e-28,52;UBERON:0006241,5.90e-28,52;UBERON:0007135,5.90e-28,52;UBERON:0003528,4.51e-27,29;UBERON:0002791,4.51e-27,29;UBERON:0001893,4.51e-27,29;UBERON:0002780,4.65e-27,39;UBERON:0001890,4.65e-27,39;UBERON:0006240,4.65e-27,39;UBERON:0002616,9.78e-27,46;UBERON:0010314,8.67e-21,92;UBERON:0000956,2.91e-20,21;UBERON:0001869,2.91e-20,21;UBERON:0000203,2.91e-20,21;UBERON:0002619,7.97e-15,17;UBERON:0002021,1.26e-10,10;UBERON:0000411,1.26e-10,10;UBERON:0001950,1.26e-10,10;UBERON:0000970,2.11e-10,9;UBERON:0000019,2.11e-10,9;UBERON:0000047,2.11e-10,9;UBERON:0010312,2.11e-10,9;UBERON:0004088,2.11e-10,9;UBERON:0002104,2.11e-10,9;UBERON:0001456,2.11e-10,9;UBERON:0003072,2.11e-10,9;UBERON:0004128,2.11e-10,9;UBERON:0003071,2.11e-10,9;UBERON:0001444,3.53e-08,11;UBERON:0002420,7.39e-08,8;UBERON:0007245,7.39e-08,8;UBERON:0010009,7.39e-08,8;UBERON:0010011,7.39e-08,8;UBERON:0000454,7.39e-08,8;UBERON:0000025,2.24e-07,114;UBERON:0000020,2.38e-07,12;UBERON:0001032,2.38e-07,12;UBERON:0004456,2.38e-07,12 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,6.97214543856797,0,0,0,0,0,0.299600110518405,0,6.32506635081714,4.3201900266141,7.57169860864975,0.856952953211411,0.662605622854841,5.87955836231779,2.58782771749238,11.9498442259303,7.70811166995721,5.2351808614927,4.76180253094355,2.90149833006426,1.9212405156506,0.52091337055676,3.90856198601933,2.8138130501584,3.36156145108982,3.83017161115768,3.98640706237488,2.23679334990361,0,2.41828992341714,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.608930956624282,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,2.39665023047716,2.28750301409313,2.26177833803156,3.12883776346098,3.06858548796397,2.90903262383384,3.73154905055843,0,0,0,0.631325567659422,2.73252930221678,3.90833577536904,5.40186389416048,5.57607825992146,5.71506592871154,5.63700369253339,5.34099829990454,1.29351685369508,0,0.378212160335639,0,0,0.278047249225598,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,4.32199371992995,0,0,0.426576501070468,0,0,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,1.9266070798535,1.87538698547525,0,0,0,0,0.861693590931196,0.716906393857656,0.668396022247182,0.566153061577665,0,1.16902343164525,0,8.67567554338879,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,1.36175842301515,1.62054984628179,0.129358683782755,0.857348140126369,0.177340233642274,1.07021290561242,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,2.25900737046827,4.60325236507177,2.86447756719698,4.98374228796694,3.42541259885321,4.5323633843382,1.35004500046361,0.45032120322422,2.71885445390523,3.62432218226274,0.518936737920883,0.798049746802062,1.36586884603307,0.729320151204882,0.838452650511929,0.919217542250071,1.11123363900808,1.44224540067226,1.60459604795908,1.01078884705519,0.50695859978048,0.565879024158229,0.561849044819294,0.640251524048693,0.918967503289812,0,0.927074607558844,0,1.64834360321323,1.17759136107518,0.685738504770831,0.177475806159338,1.1921809497366,0.581385666529314,0.658765662907314,1.18460451048347,1.28049581010941,0.263069711437843,0.543216455383447,1.12228454331548,0.711810108745045,0.29551344712669,0,0.309873682371932,0.771626443924566,1.24905288968973,0.701794825336225,0.429742108096597,0.57386499620653,0,0 | |||
|short_description=p3@Epha5 | |||
}} |
Revision as of 08:06, 14 September 2013
Short description: | p3@Epha5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Epha5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1791 |
Association with transcript: | 49bp_to_ENSMUST00000113401_5end |
EntrezGene: | Epha5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.65e-23 | 23 |
neuroblast (sensu Vertebrata) | 3.65e-23 | 23 |
neuron | 1.13e-15 | 33 |
neuronal stem cell | 1.13e-15 | 33 |
neuroblast | 1.13e-15 | 33 |
electrically signaling cell | 1.13e-15 | 33 |
electrically responsive cell | 2.62e-12 | 39 |
electrically active cell | 2.62e-12 | 39 |
neural cell | 8.41e-12 | 43 |
ectodermal cell | 2.17e-11 | 44 |
neurectodermal cell | 2.17e-11 | 44 |
neuron of cerebral cortex | 4.53e-10 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.