FFCP PHASE1:Mm9::chr2:152337467..152337484,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=654457|HGNC=|MCL_coexpression_id=9|UniProt=Q30KN7|association_with_transcript=0bp_to_NM_001039120,uc008nfo.2_5end|description=CAGE_peak_1_at_Defb26_5end|id=chr2:152337467..152337484,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001301!1.99e-20!3;UBERON:0006555!1.99e-20!3;UBERON:0005103!1.99e-20!3;UBERON:0000083!1.99e-20!3;UBERON:0009201!1.99e-20!3;UBERON:0004819!1.99e-20!3;UBERON:0006553!1.99e-20!3;UBERON:0003074!1.99e-20!3;UBERON:0003060!1.99e-20!3;UBERON:0000080!1.34e-15!4;UBERON:0005904!1.34e-15!4;UBERON:0006947!1.34e-15!4;UBERON:0002120!1.34e-15!4;UBERON:0004054!1.34e-15!4;UBERON:0004875!1.34e-15!4;UBERON:0004876!1.34e-15!4;UBERON:0005721!1.34e-15!4;UBERON:0005754!1.34e-15!4;UBERON:0007297!1.34e-15!4;UBERON:0000058!9.54e-11!6;UBERON:0003135!1.73e-09!15;UBERON:0003101!6.12e-09!16;UBERON:0000079!6.12e-09!16;UBERON:0001343!1.81e-08!2;UBERON:0004910!1.81e-08!2;UBERON:0004909!1.81e-08!2;UBERON:0005154!1.81e-08!2;UBERON:0005295!1.81e-08!2;UBERON:0005297!1.81e-08!2;UBERON:0005294!1.81e-08!2;UBERON:0010141!1.81e-08!2;UBERON:0005891!1.81e-08!2;UBERON:0004175!1.75e-07!9;UBERON:0003887!7.98e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001301,4.56e-11,3;UBERON:0006555,4.56e-11,3;UBERON:0005103,4.56e-11,3;UBERON:0000083,4.56e-11,3;UBERON:0009201,4.56e-11,3;UBERON:0004819,4.56e-11,3;UBERON:0006553,4.56e-11,3;UBERON:0003074,4.56e-11,3;UBERON:0003060,4.56e-11,3;UBERON:0000080,1.23e-08,4;UBERON:0005904,1.23e-08,4;UBERON:0006947,1.23e-08,4;UBERON:0002120,1.23e-08,4;UBERON:0004054,1.23e-08,4;UBERON:0004875,1.23e-08,4;UBERON:0004876,1.23e-08,4;UBERON:0005721,1.23e-08,4;UBERON:0005754,1.23e-08,4;UBERON:0007297,1.23e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,139.502962655388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Defb26}} | ||
|EntrezGene=654457 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|UniProt=Q30KN7 | |||
|association_with_transcript=0bp_to_NM_001039120,uc008nfo.2_5end | |||
|description=CAGE_peak_1_at_Defb26_5end | |||
|id=chr2:152337467..152337484,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!1.99e-20!3;UBERON:0006555!1.99e-20!3;UBERON:0005103!1.99e-20!3;UBERON:0000083!1.99e-20!3;UBERON:0009201!1.99e-20!3;UBERON:0004819!1.99e-20!3;UBERON:0006553!1.99e-20!3;UBERON:0003074!1.99e-20!3;UBERON:0003060!1.99e-20!3;UBERON:0000080!1.34e-15!4;UBERON:0005904!1.34e-15!4;UBERON:0006947!1.34e-15!4;UBERON:0002120!1.34e-15!4;UBERON:0004054!1.34e-15!4;UBERON:0004875!1.34e-15!4;UBERON:0004876!1.34e-15!4;UBERON:0005721!1.34e-15!4;UBERON:0005754!1.34e-15!4;UBERON:0007297!1.34e-15!4;UBERON:0000058!9.54e-11!6;UBERON:0003135!1.73e-09!15;UBERON:0003101!6.12e-09!16;UBERON:0000079!6.12e-09!16;UBERON:0001343!1.81e-08!2;UBERON:0004910!1.81e-08!2;UBERON:0004909!1.81e-08!2;UBERON:0005154!1.81e-08!2;UBERON:0005295!1.81e-08!2;UBERON:0005297!1.81e-08!2;UBERON:0005294!1.81e-08!2;UBERON:0010141!1.81e-08!2;UBERON:0005891!1.81e-08!2;UBERON:0004175!1.75e-07!9;UBERON:0003887!7.98e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,4.56e-11,3;UBERON:0006555,4.56e-11,3;UBERON:0005103,4.56e-11,3;UBERON:0000083,4.56e-11,3;UBERON:0009201,4.56e-11,3;UBERON:0004819,4.56e-11,3;UBERON:0006553,4.56e-11,3;UBERON:0003074,4.56e-11,3;UBERON:0003060,4.56e-11,3;UBERON:0000080,1.23e-08,4;UBERON:0005904,1.23e-08,4;UBERON:0006947,1.23e-08,4;UBERON:0002120,1.23e-08,4;UBERON:0004054,1.23e-08,4;UBERON:0004875,1.23e-08,4;UBERON:0004876,1.23e-08,4;UBERON:0005721,1.23e-08,4;UBERON:0005754,1.23e-08,4;UBERON:0007297,1.23e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,139.502962655388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Defb26 | |||
}} |
Revision as of 22:26, 13 September 2013
Short description: | p1@Defb26 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Defb26_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 0bp_to_NM_001039120, uc008nfo.2_5end |
EntrezGene: | Defb26 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 4.56e-11 | 3 |
excretory tube | 4.56e-11 | 3 |
mesonephric epithelium | 4.56e-11 | 3 |
mesonephric tubule | 4.56e-11 | 3 |
nephric duct | 4.56e-11 | 3 |
kidney epithelium | 4.56e-11 | 3 |
renal duct | 4.56e-11 | 3 |
mesonephric duct | 4.56e-11 | 3 |
pronephric duct | 4.56e-11 | 3 |
mesonephros | 1.23e-08 | 4 |
duct of male reproductive system | 1.23e-08 | 4 |
male genital duct | 1.23e-08 | 4 |
pronephros | 1.23e-08 | 4 |
internal male genitalia | 1.23e-08 | 4 |
nephrogenic cord | 1.23e-08 | 4 |
urogenital ridge | 1.23e-08 | 4 |
pronephric mesoderm | 1.23e-08 | 4 |
rostral part of nephrogenic cord | 1.23e-08 | 4 |
presumptive pronephric mesoderm | 1.23e-08 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.