FFCP PHASE1:Mm9::chr16:90749890..90749926,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=677|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:90749890..90749926,-|id=chr16:90749890..90749926,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,6.31e-22,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!1.48e-12!47;UBERON:0002365!3.49e-11!25;UBERON:0002330!3.49e-11!25;UBERON:0002107!2.97e-10!22;UBERON:0007499!2.97e-10!22;UBERON:0006925!2.97e-10!22;UBERON:0009497!2.97e-10!22;UBERON:0000015!2.97e-10!22;UBERON:0002423!2.97e-10!22;UBERON:0006235!2.97e-10!22;UBERON:0008835!2.97e-10!22;UBERON:0003894!2.97e-10!22;UBERON:0004161!2.97e-10!22;UBERON:0008836!2.97e-10!22;UBERON:0005256!1.23e-09!47;UBERON:0009854!1.41e-09!23;UBERON:0009856!1.41e-09!23;UBERON:0002369!2.01e-09!7;UBERON:0006858!2.01e-09!7;UBERON:0005172!1.38e-08!49;UBERON:0005173!1.38e-08!49;UBERON:0002417!1.38e-08!49;UBERON:0000916!1.38e-08!49;UBERON:0002530!4.14e-07!65;UBERON:0002368!8.65e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0002369,3.01e-35,7;UBERON:0006858,3.01e-35,7;UBERON:0005256,2.20e-24,45;UBERON:0005172,2.61e-22,49;UBERON:0005173,2.61e-22,49;UBERON:0002417,2.61e-22,49;UBERON:0000916,2.61e-22,49;UBERON:0002368,5.04e-18,60;UBERON:0003104,1.04e-17,61;UBERON:0009142,1.04e-17,61;UBERON:0003064,1.48e-17,14;UBERON:0002530,1.49e-16,65;UBERON:0009569,2.77e-16,66;UBERON:0000949,7.84e-15,72;UBERON:0002107,1.90e-14,22;UBERON:0007499,1.90e-14,22;UBERON:0006925,1.90e-14,22;UBERON:0009497,1.90e-14,22;UBERON:0000015,1.90e-14,22;UBERON:0002423,1.90e-14,22;UBERON:0006235,1.90e-14,22;UBERON:0008835,1.90e-14,22;UBERON:0003894,1.90e-14,22;UBERON:0004161,1.90e-14,22;UBERON:0008836,1.90e-14,22;UBERON:0009854,8.44e-14,23;UBERON:0009856,8.44e-14,23;UBERON:0005177,2.05e-13,79;UBERON:0002365,1.17e-12,25;UBERON:0002330,1.17e-12,25;UBERON:0002100,1.25e-11,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,0,0,8.83962733820076,1.61910957491345,1.94932925234301,1.34408066129201,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.890652834388949,1.38788261412909,4.87144765299426,8.76338889573022,9.19408107370998,2.4693628498498,2.76466500925286,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351902248327898,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0,0.697601834251224,0.268273401399619,0.467061369468678,0.16455984991348,0,0.162137619091711,0,0.219550115291051,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0.964708639009667,0.25462585178142,0,0,0.823684239564244,0,0,0.312037673114561,1.51547326768267,1.4351793081753,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0.170870880797853,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.194915761479505,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0,0.320125762024346,0.114870937911227,0,0.231768651889711,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.282328141245992,0.423073039458382,0.548783918618318,0,0.135804113845862,0,0.118635018124174,0.492522411877817,0,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p@chr16:90749890..90749926,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=677 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:90749890..90749926,- | |||
|id=chr16:90749890..90749926,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.31e-22,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.48e-12!47;UBERON:0002365!3.49e-11!25;UBERON:0002330!3.49e-11!25;UBERON:0002107!2.97e-10!22;UBERON:0007499!2.97e-10!22;UBERON:0006925!2.97e-10!22;UBERON:0009497!2.97e-10!22;UBERON:0000015!2.97e-10!22;UBERON:0002423!2.97e-10!22;UBERON:0006235!2.97e-10!22;UBERON:0008835!2.97e-10!22;UBERON:0003894!2.97e-10!22;UBERON:0004161!2.97e-10!22;UBERON:0008836!2.97e-10!22;UBERON:0005256!1.23e-09!47;UBERON:0009854!1.41e-09!23;UBERON:0009856!1.41e-09!23;UBERON:0002369!2.01e-09!7;UBERON:0006858!2.01e-09!7;UBERON:0005172!1.38e-08!49;UBERON:0005173!1.38e-08!49;UBERON:0002417!1.38e-08!49;UBERON:0000916!1.38e-08!49;UBERON:0002530!4.14e-07!65;UBERON:0002368!8.65e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,3.01e-35,7;UBERON:0006858,3.01e-35,7;UBERON:0005256,2.20e-24,45;UBERON:0005172,2.61e-22,49;UBERON:0005173,2.61e-22,49;UBERON:0002417,2.61e-22,49;UBERON:0000916,2.61e-22,49;UBERON:0002368,5.04e-18,60;UBERON:0003104,1.04e-17,61;UBERON:0009142,1.04e-17,61;UBERON:0003064,1.48e-17,14;UBERON:0002530,1.49e-16,65;UBERON:0009569,2.77e-16,66;UBERON:0000949,7.84e-15,72;UBERON:0002107,1.90e-14,22;UBERON:0007499,1.90e-14,22;UBERON:0006925,1.90e-14,22;UBERON:0009497,1.90e-14,22;UBERON:0000015,1.90e-14,22;UBERON:0002423,1.90e-14,22;UBERON:0006235,1.90e-14,22;UBERON:0008835,1.90e-14,22;UBERON:0003894,1.90e-14,22;UBERON:0004161,1.90e-14,22;UBERON:0008836,1.90e-14,22;UBERON:0009854,8.44e-14,23;UBERON:0009856,8.44e-14,23;UBERON:0005177,2.05e-13,79;UBERON:0002365,1.17e-12,25;UBERON:0002330,1.17e-12,25;UBERON:0002100,1.25e-11,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,0,0,8.83962733820076,1.61910957491345,1.94932925234301,1.34408066129201,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.890652834388949,1.38788261412909,4.87144765299426,8.76338889573022,9.19408107370998,2.4693628498498,2.76466500925286,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351902248327898,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0,0.697601834251224,0.268273401399619,0.467061369468678,0.16455984991348,0,0.162137619091711,0,0.219550115291051,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0.964708639009667,0.25462585178142,0,0,0.823684239564244,0,0,0.312037673114561,1.51547326768267,1.4351793081753,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0.170870880797853,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.194915761479505,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0,0.320125762024346,0.114870937911227,0,0.231768651889711,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.282328141245992,0.423073039458382,0.548783918618318,0,0.135804113845862,0,0.118635018124174,0.492522411877817,0,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr16:90749890..90749926,- | |||
}} |
Revision as of 13:16, 13 September 2013
Short description: | p@chr16:90749890..90749926, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:90749890..90749926, - |
Coexpression cluster: | MCL_coexpression_mm9:677 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.31e-22 | 5 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 3.01e-35 | 7 |
adrenal/interrenal gland | 3.01e-35 | 7 |
trunk mesenchyme | 2.20e-24 | 45 |
abdomen element | 2.61e-22 | 49 |
abdominal segment element | 2.61e-22 | 49 |
abdominal segment of trunk | 2.61e-22 | 49 |
abdomen | 2.61e-22 | 49 |
endocrine gland | 5.04e-18 | 60 |
mesenchyme | 1.04e-17 | 61 |
entire embryonic mesenchyme | 1.04e-17 | 61 |
intermediate mesoderm | 1.48e-17 | 14 |
gland | 1.49e-16 | 65 |
subdivision of trunk | 2.77e-16 | 66 |
endocrine system | 7.84e-15 | 72 |
liver | 1.90e-14 | 22 |
epithelial sac | 1.90e-14 | 22 |
digestive gland | 1.90e-14 | 22 |
epithelium of foregut-midgut junction | 1.90e-14 | 22 |
anatomical boundary | 1.90e-14 | 22 |
hepatobiliary system | 1.90e-14 | 22 |
foregut-midgut junction | 1.90e-14 | 22 |
hepatic diverticulum | 1.90e-14 | 22 |
liver primordium | 1.90e-14 | 22 |
septum transversum | 1.90e-14 | 22 |
liver bud | 1.90e-14 | 22 |
digestive tract diverticulum | 8.44e-14 | 23 |
sac | 8.44e-14 | 23 |
trunk region element | 2.05e-13 | 79 |
exocrine gland | 1.17e-12 | 25 |
exocrine system | 1.17e-12 | 25 |
trunk | 1.25e-11 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.