FFCP PHASE1:Mm9::chr7:88638572..88638583,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11775|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=8bp_to_ENSMUST00000152355_5end|description=CAGE_peak_5_at_Ap3b2_5end|id=chr7:88638572..88638583,-|ontology_enrichment_celltype=CL:0000540!3.84e-18!33;CL:0000047!3.84e-18!33;CL:0000031!3.84e-18!33;CL:0000404!3.84e-18!33;CL:0000117!3.02e-16!23;CL:0000337!3.02e-16!23;CL:0002319!2.26e-15!43;CL:0000221!2.42e-15!44;CL:0000133!2.42e-15!44;CL:0000393!3.62e-13!39;CL:0000211!3.62e-13!39;CL:0000055!4.04e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.58e-26,23;CL:0000337,1.58e-26,23;CL:0000540,2.69e-19,33;CL:0000047,2.69e-19,33;CL:0000031,2.69e-19,33;CL:0000404,2.69e-19,33;CL:0000393,3.69e-15,39;CL:0000211,3.69e-15,39;CL:0002319,2.86e-14,43;CL:0000221,9.01e-14,44;CL:0000133,9.01e-14,44;CL:0002609,3.60e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.53e-38!73;UBERON:0005743!4.53e-38!73;UBERON:0000073!6.54e-38!75;UBERON:0001016!6.54e-38!75;UBERON:0004121!1.45e-37!102;UBERON:0000924!1.45e-37!102;UBERON:0006601!1.45e-37!102;UBERON:0002346!4.53e-37!71;UBERON:0003075!4.53e-37!71;UBERON:0007284!4.53e-37!71;UBERON:0000033!7.58e-32!63;UBERON:0001049!7.25e-31!52;UBERON:0005068!7.25e-31!52;UBERON:0006241!7.25e-31!52;UBERON:0007135!7.25e-31!52;UBERON:0000955!9.77e-30!50;UBERON:0006238!9.77e-30!50;UBERON:0002616!6.90e-29!49;UBERON:0003056!3.37e-27!49;UBERON:0003080!3.12e-24!40;UBERON:0002780!1.58e-23!39;UBERON:0001890!1.58e-23!39;UBERON:0006240!1.58e-23!39;UBERON:0002020!2.06e-22!34;UBERON:0002791!4.83e-19!29;UBERON:0003528!4.83e-19!29;UBERON:0001893!4.83e-19!29;UBERON:0007811!2.09e-16!86;UBERON:0000956!1.80e-13!21;UBERON:0001869!1.80e-13!21;UBERON:0000203!1.80e-13!21;UBERON:0000153!5.08e-13!94;UBERON:0002619!5.81e-11!17;UBERON:0002021!2.47e-09!10;UBERON:0000411!2.47e-09!10;UBERON:0001950!2.47e-09!10;UBERON:0003076!4.92e-07!12;UBERON:0003057!4.92e-07!12;UBERON:0002420!8.72e-07!8;UBERON:0007245!8.72e-07!8;UBERON:0010009!8.72e-07!8;UBERON:0010011!8.72e-07!8;UBERON:0000454!8.72e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.21e-50,54;UBERON:0001049,3.79e-47,52;UBERON:0005068,3.79e-47,52;UBERON:0006241,3.79e-47,52;UBERON:0007135,3.79e-47,52;UBERON:0001017,1.27e-46,73;UBERON:0002346,1.41e-46,64;UBERON:0003075,1.41e-46,64;UBERON:0007284,1.41e-46,64;UBERON:0001016,5.87e-45,75;UBERON:0000955,2.59e-41,47;UBERON:0006238,2.59e-41,47;UBERON:0002616,6.39e-40,46;UBERON:0004121,1.72e-39,95;UBERON:0000924,1.72e-39,95;UBERON:0006601,1.72e-39,95;UBERON:0010371,5.72e-39,73;UBERON:0002020,1.90e-36,34;UBERON:0003056,1.27e-35,49;UBERON:0003080,2.19e-35,40;UBERON:0002780,3.29e-34,39;UBERON:0001890,3.29e-34,39;UBERON:0006240,3.29e-34,39;UBERON:0003528,1.06e-30,29;UBERON:0002791,1.06e-30,29;UBERON:0001893,1.06e-30,29;UBERON:0010314,4.48e-29,92;UBERON:0000956,3.16e-21,21;UBERON:0001869,3.16e-21,21;UBERON:0000203,3.16e-21,21;UBERON:0002619,5.73e-17,17;UBERON:0000025,7.62e-15,114;UBERON:0002021,9.19e-15,10;UBERON:0000411,9.19e-15,10;UBERON:0001950,9.19e-15,10;UBERON:0004111,5.28e-13,122;UBERON:0003076,2.39e-11,12;UBERON:0003057,2.39e-11,12;UBERON:0002420,1.90e-10,8;UBERON:0007245,1.90e-10,8;UBERON:0010009,1.90e-10,8;UBERON:0010011,1.90e-10,8;UBERON:0000454,1.90e-10,8;UBERON:0000483,1.74e-08,174;UBERON:0000119,3.11e-08,176;UBERON:0011216,5.46e-08,194;UBERON:0002240,1.13e-07,6;UBERON:0005174,1.13e-07,6;UBERON:0001137,1.13e-07,6;UBERON:0000369,3.16e-07,5;UBERON:0002435,3.16e-07,5;UBERON:0000204,3.16e-07,5;UBERON:0010082,3.16e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,4.65327859977075,5.81890077199236,5.70448263155561,0,0,0,0,0,0.599200221036809,0,2.07379224616955,4.18518408828241,3.99617426567626,2.28520787523043,6.18431914664518,3.06226998037385,3.06705507258356,3.67687514644008,4.40463523997555,3.57524546638526,6.45147439676223,5.80299666012853,4.29991924931325,4.68822033501084,6.14202597803038,2.8138130501584,4.27835093775068,4.12480019663135,2.98980529678116,5.21918448310842,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.520455980298408,1.21786191324856,0.691846491768175,0.301445281105245,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,2.34224637609238,2.72280718857492,0,0,0,0,4.19413790333504,5.49000723382352,4.02093926761166,5.9100268865374,7.16003280524926,5.61027720310812,4.38051410282946,0.101839363850316,0,1.0108910337347,1.26265113531884,0.130120442962704,0.229902104433473,1.0803727788321,0.30140963567143,0.95251098811859,1.40925092313335,1.40552586839593,3.10444044886819,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,6.9395683026162,3.08713837137853,0,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0.198956472041151,0.58489226135736,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,6.90367536947505,5.50894926983355,0,0,0.94652465824877,0.780877488593277,1.29254038639679,0.238968797952552,0.222798674082394,1.13230612315533,0.809621403349789,0.584511715822624,0.790575555893047,5.78378369559253,0.283880170416537,0.35613120733451,0.162886959353576,0.989820737835213,0,0.485561272309963,0,0.754420319023592,0.295301892880773,0.922305443831782,0,1.09060118843252,0,0.316036757935816,0,0,4.42571487479924,0.18006109403131,0.517434735131018,0.643011105094777,1.24138163549592,1.24858172321449,2.79733335023606,2.74018454203139,0,0,0,0.16488625294148,0,0,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0.523511883968059,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,5.0827665835536,11.0478056761722,6.30185064783336,5.32744865265431,10.9613203163303,3.7769694869485,8.10027000278167,6.75481804836331,8.60970577069989,8.28416498802912,0.726511433089237,0.798049746802062,1.19513524027894,0.972426868273176,0.838452650511929,0.367687016900028,0.888986911206461,1.23621034343337,0,1.26348605881899,1.01391719956096,0.565879024158229,0.37456602987953,0.768301828858431,0.459483751644906,0.476293691283074,1.15884325944855,0.192909220463705,0.824171801606613,0.883193520806384,0.685738504770831,1.06485483695602,0.238436189947321,0.726732083161643,0.470546902076653,0.846146078916765,0.365855945745545,1.05227884575137,0.543216455383447,2.80571135828869,0.949080144993393,0.886540341380071,0.409231043169689,0.619747364743864,0.578719832943424,1.99848462350357,0.233931608445408,0.429742108096597,0.382576664137687,0,0.231867835620421|short_description=p5@Ap3b2}} | ||
|EntrezGene=11775 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=8bp_to_ENSMUST00000152355_5end | |||
|description=CAGE_peak_5_at_Ap3b2_5end | |||
|id=chr7:88638572..88638583,- | |||
|ontology_enrichment_celltype=CL:0000540!3.84e-18!33;CL:0000047!3.84e-18!33;CL:0000031!3.84e-18!33;CL:0000404!3.84e-18!33;CL:0000117!3.02e-16!23;CL:0000337!3.02e-16!23;CL:0002319!2.26e-15!43;CL:0000221!2.42e-15!44;CL:0000133!2.42e-15!44;CL:0000393!3.62e-13!39;CL:0000211!3.62e-13!39;CL:0000055!4.04e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.58e-26,23;CL:0000337,1.58e-26,23;CL:0000540,2.69e-19,33;CL:0000047,2.69e-19,33;CL:0000031,2.69e-19,33;CL:0000404,2.69e-19,33;CL:0000393,3.69e-15,39;CL:0000211,3.69e-15,39;CL:0002319,2.86e-14,43;CL:0000221,9.01e-14,44;CL:0000133,9.01e-14,44;CL:0002609,3.60e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.53e-38!73;UBERON:0005743!4.53e-38!73;UBERON:0000073!6.54e-38!75;UBERON:0001016!6.54e-38!75;UBERON:0004121!1.45e-37!102;UBERON:0000924!1.45e-37!102;UBERON:0006601!1.45e-37!102;UBERON:0002346!4.53e-37!71;UBERON:0003075!4.53e-37!71;UBERON:0007284!4.53e-37!71;UBERON:0000033!7.58e-32!63;UBERON:0001049!7.25e-31!52;UBERON:0005068!7.25e-31!52;UBERON:0006241!7.25e-31!52;UBERON:0007135!7.25e-31!52;UBERON:0000955!9.77e-30!50;UBERON:0006238!9.77e-30!50;UBERON:0002616!6.90e-29!49;UBERON:0003056!3.37e-27!49;UBERON:0003080!3.12e-24!40;UBERON:0002780!1.58e-23!39;UBERON:0001890!1.58e-23!39;UBERON:0006240!1.58e-23!39;UBERON:0002020!2.06e-22!34;UBERON:0002791!4.83e-19!29;UBERON:0003528!4.83e-19!29;UBERON:0001893!4.83e-19!29;UBERON:0007811!2.09e-16!86;UBERON:0000956!1.80e-13!21;UBERON:0001869!1.80e-13!21;UBERON:0000203!1.80e-13!21;UBERON:0000153!5.08e-13!94;UBERON:0002619!5.81e-11!17;UBERON:0002021!2.47e-09!10;UBERON:0000411!2.47e-09!10;UBERON:0001950!2.47e-09!10;UBERON:0003076!4.92e-07!12;UBERON:0003057!4.92e-07!12;UBERON:0002420!8.72e-07!8;UBERON:0007245!8.72e-07!8;UBERON:0010009!8.72e-07!8;UBERON:0010011!8.72e-07!8;UBERON:0000454!8.72e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.21e-50,54;UBERON:0001049,3.79e-47,52;UBERON:0005068,3.79e-47,52;UBERON:0006241,3.79e-47,52;UBERON:0007135,3.79e-47,52;UBERON:0001017,1.27e-46,73;UBERON:0002346,1.41e-46,64;UBERON:0003075,1.41e-46,64;UBERON:0007284,1.41e-46,64;UBERON:0001016,5.87e-45,75;UBERON:0000955,2.59e-41,47;UBERON:0006238,2.59e-41,47;UBERON:0002616,6.39e-40,46;UBERON:0004121,1.72e-39,95;UBERON:0000924,1.72e-39,95;UBERON:0006601,1.72e-39,95;UBERON:0010371,5.72e-39,73;UBERON:0002020,1.90e-36,34;UBERON:0003056,1.27e-35,49;UBERON:0003080,2.19e-35,40;UBERON:0002780,3.29e-34,39;UBERON:0001890,3.29e-34,39;UBERON:0006240,3.29e-34,39;UBERON:0003528,1.06e-30,29;UBERON:0002791,1.06e-30,29;UBERON:0001893,1.06e-30,29;UBERON:0010314,4.48e-29,92;UBERON:0000956,3.16e-21,21;UBERON:0001869,3.16e-21,21;UBERON:0000203,3.16e-21,21;UBERON:0002619,5.73e-17,17;UBERON:0000025,7.62e-15,114;UBERON:0002021,9.19e-15,10;UBERON:0000411,9.19e-15,10;UBERON:0001950,9.19e-15,10;UBERON:0004111,5.28e-13,122;UBERON:0003076,2.39e-11,12;UBERON:0003057,2.39e-11,12;UBERON:0002420,1.90e-10,8;UBERON:0007245,1.90e-10,8;UBERON:0010009,1.90e-10,8;UBERON:0010011,1.90e-10,8;UBERON:0000454,1.90e-10,8;UBERON:0000483,1.74e-08,174;UBERON:0000119,3.11e-08,176;UBERON:0011216,5.46e-08,194;UBERON:0002240,1.13e-07,6;UBERON:0005174,1.13e-07,6;UBERON:0001137,1.13e-07,6;UBERON:0000369,3.16e-07,5;UBERON:0002435,3.16e-07,5;UBERON:0000204,3.16e-07,5;UBERON:0010082,3.16e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,4.65327859977075,5.81890077199236,5.70448263155561,0,0,0,0,0,0.599200221036809,0,2.07379224616955,4.18518408828241,3.99617426567626,2.28520787523043,6.18431914664518,3.06226998037385,3.06705507258356,3.67687514644008,4.40463523997555,3.57524546638526,6.45147439676223,5.80299666012853,4.29991924931325,4.68822033501084,6.14202597803038,2.8138130501584,4.27835093775068,4.12480019663135,2.98980529678116,5.21918448310842,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.520455980298408,1.21786191324856,0.691846491768175,0.301445281105245,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,2.34224637609238,2.72280718857492,0,0,0,0,4.19413790333504,5.49000723382352,4.02093926761166,5.9100268865374,7.16003280524926,5.61027720310812,4.38051410282946,0.101839363850316,0,1.0108910337347,1.26265113531884,0.130120442962704,0.229902104433473,1.0803727788321,0.30140963567143,0.95251098811859,1.40925092313335,1.40552586839593,3.10444044886819,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,6.9395683026162,3.08713837137853,0,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0.198956472041151,0.58489226135736,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,6.90367536947505,5.50894926983355,0,0,0.94652465824877,0.780877488593277,1.29254038639679,0.238968797952552,0.222798674082394,1.13230612315533,0.809621403349789,0.584511715822624,0.790575555893047,5.78378369559253,0.283880170416537,0.35613120733451,0.162886959353576,0.989820737835213,0,0.485561272309963,0,0.754420319023592,0.295301892880773,0.922305443831782,0,1.09060118843252,0,0.316036757935816,0,0,4.42571487479924,0.18006109403131,0.517434735131018,0.643011105094777,1.24138163549592,1.24858172321449,2.79733335023606,2.74018454203139,0,0,0,0.16488625294148,0,0,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0.523511883968059,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,5.0827665835536,11.0478056761722,6.30185064783336,5.32744865265431,10.9613203163303,3.7769694869485,8.10027000278167,6.75481804836331,8.60970577069989,8.28416498802912,0.726511433089237,0.798049746802062,1.19513524027894,0.972426868273176,0.838452650511929,0.367687016900028,0.888986911206461,1.23621034343337,0,1.26348605881899,1.01391719956096,0.565879024158229,0.37456602987953,0.768301828858431,0.459483751644906,0.476293691283074,1.15884325944855,0.192909220463705,0.824171801606613,0.883193520806384,0.685738504770831,1.06485483695602,0.238436189947321,0.726732083161643,0.470546902076653,0.846146078916765,0.365855945745545,1.05227884575137,0.543216455383447,2.80571135828869,0.949080144993393,0.886540341380071,0.409231043169689,0.619747364743864,0.578719832943424,1.99848462350357,0.233931608445408,0.429742108096597,0.382576664137687,0,0.231867835620421 | |||
|short_description=p5@Ap3b2 | |||
}} |
Revision as of 14:21, 14 September 2013
Short description: | p5@Ap3b2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ap3b2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 8bp_to_ENSMUST00000152355_5end |
EntrezGene: | Ap3b2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.58e-26 | 23 |
neuroblast (sensu Vertebrata) | 1.58e-26 | 23 |
neuron | 2.69e-19 | 33 |
neuronal stem cell | 2.69e-19 | 33 |
neuroblast | 2.69e-19 | 33 |
electrically signaling cell | 2.69e-19 | 33 |
electrically responsive cell | 3.69e-15 | 39 |
electrically active cell | 3.69e-15 | 39 |
neural cell | 2.86e-14 | 43 |
ectodermal cell | 9.01e-14 | 44 |
neurectodermal cell | 9.01e-14 | 44 |
neuron of cerebral cortex | 3.60e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.