Personal tools

FFCP PHASE1:Mm9::chr9:98197322..98197331,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=74080|HGNC=|MCL_coexpression_id=644|UniProt=Q3V3C7|association_with_transcript=241bp_to_ENSMUST00000112937_5end|description=CAGE_peak_6_at_Nmnat3_5end|id=chr9:98197322..98197331,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,8.61e-13,3;CL:0002006,8.61e-13,3;CL:0002024,8.61e-13,3;CL:0000050,5.21e-11,9;CL:0000839,1.51e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!4.61e-07!49;UBERON:0005173!4.61e-07!49;UBERON:0002417!4.61e-07!49;UBERON:0000916!4.61e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.15e-17,6;UBERON:0004457,6.15e-17,6;UBERON:0000042,6.15e-17,6;UBERON:0004854,6.15e-17,6;UBERON:0009034,6.15e-17,6;UBERON:0002095,6.15e-17,6;UBERON:0004782,6.15e-17,6;UBERON:0003281,6.15e-17,6;UBERON:0009664,6.15e-17,6;UBERON:0002296,6.15e-17,6;UBERON:0005602,6.15e-17,6;UBERON:0001179,6.15e-17,6;UBERON:0006293,6.15e-17,6;UBERON:0005172,2.55e-15,49;UBERON:0005173,2.55e-15,49;UBERON:0002417,2.55e-15,49;UBERON:0000916,2.55e-15,49;UBERON:0003887,6.51e-14,10;UBERON:0002107,6.40e-13,22;UBERON:0007499,6.40e-13,22;UBERON:0006925,6.40e-13,22;UBERON:0009497,6.40e-13,22;UBERON:0000015,6.40e-13,22;UBERON:0002423,6.40e-13,22;UBERON:0006235,6.40e-13,22;UBERON:0008835,6.40e-13,22;UBERON:0003894,6.40e-13,22;UBERON:0004161,6.40e-13,22;UBERON:0008836,6.40e-13,22;UBERON:0009854,2.67e-12,23;UBERON:0009856,2.67e-12,23;UBERON:0002365,3.30e-11,25;UBERON:0002330,3.30e-11,25;UBERON:0009569,1.13e-10,66;UBERON:0005177,1.82e-08,79;UBERON:0001041,3.72e-07,80;UBERON:0002100,4.26e-07,90;UBERON:0003104,5.87e-07,61;UBERON:0009142,5.87e-07,61;UBERON:0005256,6.31e-07,45|phase1_expression=0,0,0,0.60492842261366,0.500895729946347,0.33575854382378,0,0.129123323441576,0.563154888606667,0.468129052643987,0,0.239316476986009,0.342401459862411,0.0874204024189974,1.99865857089398,5.26435695213547,2.79824751251259,0,0,0.42438965179803,0.17008658030214,0.297872853602656,0,0.319984845586813,0,0,0.430761996159075,0.430942465371778,0.190023419456374,0,0,1.27006134691926,0.61506478758457,15.8481681015439,0.866554859253824,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0,0,0.485510353031154,0,0,0,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0.289198713839823,0,0.323533699894818,1.76673214768315,1.93950101254089,0,0,0,0.510914110417183,0.479260498023681,0,0.508280908292259,0,0.457500602818626,0,0,0,0,0,0,1.11966273549084,0,0.210441855886474,0,0,0,0.30140963567143,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0.439100230582101,0,0,0,0.330418782983798,0,0.213288250535234,0,0,0.403367049246685,0.22237804384487,0.190225626112559,0.949058123089023,0.658795818896044,0.502670417600539,0.994782360205754,0.38992817423824,0,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.280543279561274,0.822074982615345,0.590440591918409,0.784993639206874,0.370191491765402,0.592905254174298,3.00321190288969,1.37591296579242,3.59779379815766,2.63718157805054,1.68824011826692,3.05551022137704,2.30156909960649,1.62135226775035,1.37280706594041,0,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0.874442509889552,0.18542530201051,2.9048049735635,0.206386867963223,2.40752885580625,4.52084296811258,5.19438065339896,2.51655990527175,0.169978429993855,0,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0,0.129920822977795,0.537080087002444,0.198681354781265,0,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0.375364950902364,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0.367687016900028,0,0,0.320919209591815,0,0.50695859978048,0.565879024158229,0.37456602987953,0.512201219238954,0.287177344778066,1.90517476513229,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0.290692833264657,0.470546902076653,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.593175090620871,0,0.409231043169689,0.464810523557898,0.771626443924566,0,0,0.429742108096597,0.191288332068843,0,0|short_description=p6@Nmnat3}}
|EntrezGene=74080
|HGNC=
|MCL_coexpression_id=644
|UniProt=Q3V3C7
|association_with_transcript=241bp_to_ENSMUST00000112937_5end
|description=CAGE_peak_6_at_Nmnat3_5end
|id=chr9:98197322..98197331,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002027,8.61e-13,3;CL:0002006,8.61e-13,3;CL:0002024,8.61e-13,3;CL:0000050,5.21e-11,9;CL:0000839,1.51e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005172!4.61e-07!49;UBERON:0005173!4.61e-07!49;UBERON:0002417!4.61e-07!49;UBERON:0000916!4.61e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.15e-17,6;UBERON:0004457,6.15e-17,6;UBERON:0000042,6.15e-17,6;UBERON:0004854,6.15e-17,6;UBERON:0009034,6.15e-17,6;UBERON:0002095,6.15e-17,6;UBERON:0004782,6.15e-17,6;UBERON:0003281,6.15e-17,6;UBERON:0009664,6.15e-17,6;UBERON:0002296,6.15e-17,6;UBERON:0005602,6.15e-17,6;UBERON:0001179,6.15e-17,6;UBERON:0006293,6.15e-17,6;UBERON:0005172,2.55e-15,49;UBERON:0005173,2.55e-15,49;UBERON:0002417,2.55e-15,49;UBERON:0000916,2.55e-15,49;UBERON:0003887,6.51e-14,10;UBERON:0002107,6.40e-13,22;UBERON:0007499,6.40e-13,22;UBERON:0006925,6.40e-13,22;UBERON:0009497,6.40e-13,22;UBERON:0000015,6.40e-13,22;UBERON:0002423,6.40e-13,22;UBERON:0006235,6.40e-13,22;UBERON:0008835,6.40e-13,22;UBERON:0003894,6.40e-13,22;UBERON:0004161,6.40e-13,22;UBERON:0008836,6.40e-13,22;UBERON:0009854,2.67e-12,23;UBERON:0009856,2.67e-12,23;UBERON:0002365,3.30e-11,25;UBERON:0002330,3.30e-11,25;UBERON:0009569,1.13e-10,66;UBERON:0005177,1.82e-08,79;UBERON:0001041,3.72e-07,80;UBERON:0002100,4.26e-07,90;UBERON:0003104,5.87e-07,61;UBERON:0009142,5.87e-07,61;UBERON:0005256,6.31e-07,45
|phase1_expression=0,0,0,0.60492842261366,0.500895729946347,0.33575854382378,0,0.129123323441576,0.563154888606667,0.468129052643987,0,0.239316476986009,0.342401459862411,0.0874204024189974,1.99865857089398,5.26435695213547,2.79824751251259,0,0,0.42438965179803,0.17008658030214,0.297872853602656,0,0.319984845586813,0,0,0.430761996159075,0.430942465371778,0.190023419456374,0,0,1.27006134691926,0.61506478758457,15.8481681015439,0.866554859253824,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0,0,0.485510353031154,0,0,0,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0.289198713839823,0,0.323533699894818,1.76673214768315,1.93950101254089,0,0,0,0.510914110417183,0.479260498023681,0,0.508280908292259,0,0.457500602818626,0,0,0,0,0,0,1.11966273549084,0,0.210441855886474,0,0,0,0.30140963567143,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0.439100230582101,0,0,0,0.330418782983798,0,0.213288250535234,0,0,0.403367049246685,0.22237804384487,0.190225626112559,0.949058123089023,0.658795818896044,0.502670417600539,0.994782360205754,0.38992817423824,0,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.280543279561274,0.822074982615345,0.590440591918409,0.784993639206874,0.370191491765402,0.592905254174298,3.00321190288969,1.37591296579242,3.59779379815766,2.63718157805054,1.68824011826692,3.05551022137704,2.30156909960649,1.62135226775035,1.37280706594041,0,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0.874442509889552,0.18542530201051,2.9048049735635,0.206386867963223,2.40752885580625,4.52084296811258,5.19438065339896,2.51655990527175,0.169978429993855,0,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0,0.129920822977795,0.537080087002444,0.198681354781265,0,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0.375364950902364,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0.367687016900028,0,0,0.320919209591815,0,0.50695859978048,0.565879024158229,0.37456602987953,0.512201219238954,0.287177344778066,1.90517476513229,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0.290692833264657,0.470546902076653,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.593175090620871,0,0.409231043169689,0.464810523557898,0.771626443924566,0,0,0.429742108096597,0.191288332068843,0,0
|short_description=p6@Nmnat3
}}

Revision as of 19:04, 14 September 2013

Short description:p6@Nmnat3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Nmnat3_5end
Coexpression cluster:MCL_coexpression_mm9:644
Association with transcript: 241bp_to_ENSMUST00000112937_5end
EntrezGene:Nmnat3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Nmnat3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.26
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F83.00
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D14.52
spleen, neonate N20.CNhs11112.824-19H15.19
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
spleen6.15e-176
cavity lining6.15e-176
serous membrane6.15e-176
gastrointestinal system mesentery6.15e-176
stomach region6.15e-176
mesentery6.15e-176
gastrointestinal system serosa6.15e-176
mesentery of stomach6.15e-176
gut mesentery6.15e-176
dorsal mesentery6.15e-176
dorsal mesogastrium6.15e-176
peritoneal cavity6.15e-176
spleen primordium6.15e-176
abdomen element2.55e-1549
abdominal segment element2.55e-1549
abdominal segment of trunk2.55e-1549
abdomen2.55e-1549
intraembryonic coelom6.51e-1410
liver6.40e-1322
epithelial sac6.40e-1322
digestive gland6.40e-1322
epithelium of foregut-midgut junction6.40e-1322
anatomical boundary6.40e-1322
hepatobiliary system6.40e-1322
foregut-midgut junction6.40e-1322
hepatic diverticulum6.40e-1322
liver primordium6.40e-1322
septum transversum6.40e-1322
liver bud6.40e-1322
digestive tract diverticulum2.67e-1223
sac2.67e-1223
exocrine gland3.30e-1125
exocrine system3.30e-1125
subdivision of trunk1.13e-1066
trunk region element1.82e-0879
foregut3.72e-0780
trunk4.26e-0790
mesenchyme5.87e-0761
entire embryonic mesenchyme5.87e-0761
trunk mesenchyme6.31e-0745







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:98197322..98197331,%2B&oldid=3063658"