FFCP PHASE1:Mm9::chr6:120314112..120314181,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=214899|HGNC=|UniProt=E9Q8F1,Q3UXZ9,Q3UT97|association_with_transcript=0bp_to_ENSMUST00000005108,ENSMUST00000100996,ENSMUST00000135802,ENSMUST00000152293,NM_145997,uc009dnd.2,uc009dne.2,uc009dnf.2,uc009dng.2_5end|description=CAGE_peak_1_at_Kdm5a_5end|id=chr6:120314112..120314181,+|ontology_enrichment_celltype=CL:0002031!2.67e-07!25;CL:0000050!5.42e-07!9|ontology_enrichment_celltype_v019_2=CL:0002031,2.67e-07,25;CL:0000050,5.42e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!5.74e-07!29;UBERON:0001048!6.54e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0000077,1.42e-07,35;UBERON:0001048,1.53e-07,134;UBERON:0004177,5.74e-07,29;UBERON:0005057,5.74e-07,29|phase1_expression=14.5735450865363,24.0793031271159,20.9299650119187,29.3390284967625,33.5600139064053,17.7952028226603,23.127651418957,28.5362544805884,29.987997818305,29.9602593692152,25.6826952338257,20.5812170207968,28.0769197087177,29.1109940055261,31.9785371343036,27.1316858302367,27.2829132469977,32.3348719492194,41.4085589489331,45.8340823941873,14.0321428749265,14.5957698265301,18.8063848180033,17.7591589300681,11.6998733344257,16.6527269593356,12.9228598847722,15.2984575206981,10.6413114895569,12.0974462284767,11.5299865540758,40.0069324279568,33.8285633171514,31.6963362030877,16.7533939455739,8.31173226792462,14.7001936508906,34.3195937204264,20.3147189576188,24.0820922227947,39.411509698078,35.5183652178392,33.9857247121808,12.9673722514845,12.2666086775613,9.17733760808408,10.9534788208725,5.01457859675027,3.95435128922049,8.1660557611199,5.73944328663986,1.43752564364972,40.2678254538567,37.7188313845899,37.642505503956,14.1492689819771,17.7650732762029,15.9858348606007,8.6996078169627,10.0508286061686,6.33831403506179,5.42151251310611,3.55717918444456,5.84934816232909,5.93319817540185,4.9733608046227,5.09320187881288,2.30530983192933,9.64313394468842,8.91039192989158,7.78202357000113,7.9982275633065,8.1721360152097,7.34944795289724,9.87208351487835,10.1114066527102,20.9220173898839,12.6410464704336,14.2854075928306,6.59431438650969,7.13603620098795,7.8137005583514,8.37548997004143,15.757353080887,10.8486755921535,14.7314292736834,12.9558229527184,9.69277118291563,10.7531194533121,10.0510174942025,43.7695377939533,18.0689014166091,13.599426674155,10.2543606411185,12.9955283489534,15.2329141613094,14.6062196937022,6.64678258054425,5.97507810586598,6.71345191569646,14.7885590765515,7.69958864485907,30.5766287647975,7.11066703153331,15.3708639117962,19.0019899106324,22.2430755806505,15.8715592809493,27.4474156666002,18.5552673831031,12.4909435271618,10.6562917409249,14.2981608298756,13.1128697280782,23.0473865985981,16.5879900555172,22.9891319992968,20.2439099687876,15.0383793831479,17.1472860944254,23.8508839937225,22.7891368973554,7.45567044872489,26.3502717310392,24.0863712835473,10.2182822083437,16.1750418082992,15.5974710058286,14.7401463404755,15.1288545798871,22.4175295381127,11.0575829859321,12.1677024134594,14.8314965251592,14.9607392082883,15.412919991437,20.2660334062129,18.2878246796837,16.4269792981889,18.0979996062368,15.0939713836736,13.3343220571414,14.945156773844,15.5225962370787,21.9077527267276,18.5764894413032,19.6773621575431,27.4225572983357,10.993967639575,13.615637772083,18.8267702855425,13.1517439456545,12.2340789659263,17.4126083261083,17.4914815946752,19.1072896145753,14.7464769335779,14.9261786126535,17.0498099637356,17.8128164380532,17.5894544985822,17.4660199617184,17.0456209621351,18.2990735525086,16.6608481918369,13.9520366850245,18.2425912951741,22.4189457344965,19.9117418395311,18.2225885127796,21.0778904819225,25.7311977868585,18.6617597997393,22.009852676701,13.6688466566683,12.657267322652,17.1817767151575,19.3048913664387,14.2903127858607,14.1664369834868,15.5929628199733,16.7397325437374,18.2349995952794,13.5060194539917,15.6594590309689,13.6700132420929,18.0961350336194,16.1154742353332,17.5467678407208,31.4586793028978,17.9394581395996,15.9313018603494,9.67306294860717,16.7945313536301,16.9061603509621,17.514014194697,16.0980564349129,24.1267220422696,15.5561881325673,15.0562350939194,16.9558626068685,15.5480426541469,14.8226313543574,22.5240892716727,14.545365638377,22.2613491261005,20.0831520174618,16.4000468631643,16.5506803657923,16.686375972147,21.0775794807546,12.0807021802756,25.8782771749238,16.3742016974142,14.0416952901552,17.9331003342449,14.7105879087968,15.4381926836277,22.5398892003258,11.3694847062291,11.8964432802679,13.0703716046895,18.5405296147917,23.1158635269706,19.2815349117671,20.4890330250689,20.8078390220172,18.6030339304971,19.4534817762134,17.8611013040154,18.131923095919,17.7918342055259,7.53956419696361,15.7732648307426,14.7529281905711,21.5230662117691,13.4862495589745,14.6514608240254,8.19674726883377,21.9649706667804,12.9358369960665,15.6175497718655,16.1567548299599,13.3822526853429,15.3731085116852,17.5507449089076,12.1443210502468,14.9050487534769,11.8586333383957,17.3513510867776,21.0071326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| ||
|EntrezGene=214899 | |||
|HGNC= | |||
|UniProt=E9Q8F1,Q3UXZ9,Q3UT97 | |||
|association_with_transcript=0bp_to_ENSMUST00000005108,ENSMUST00000100996,ENSMUST00000135802,ENSMUST00000152293,NM_145997,uc009dnd.2,uc009dne.2,uc009dnf.2,uc009dng.2_5end | |||
|description=CAGE_peak_1_at_Kdm5a_5end | |||
|id=chr6:120314112..120314181,+ | |||
|ontology_enrichment_celltype=CL:0002031!2.67e-07!25;CL:0000050!5.42e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,2.67e-07,25;CL:0000050,5.42e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.74e-07!29;UBERON:0001048!6.54e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000077,1.42e-07,35;UBERON:0001048,1.53e-07,134;UBERON:0004177,5.74e-07,29;UBERON:0005057,5.74e-07,29 | |||
|phase1_expression=14.5735450865363,24.0793031271159,20.9299650119187,29.3390284967625,33.5600139064053,17.7952028226603,23.127651418957,28.5362544805884,29.987997818305,29.9602593692152,25.6826952338257,20.5812170207968,28.0769197087177,29.1109940055261,31.9785371343036,27.1316858302367,27.2829132469977,32.3348719492194,41.4085589489331,45.8340823941873,14.0321428749265,14.5957698265301,18.8063848180033,17.7591589300681,11.6998733344257,16.6527269593356,12.9228598847722,15.2984575206981,10.6413114895569,12.0974462284767,11.5299865540758,40.0069324279568,33.8285633171514,31.6963362030877,16.7533939455739,8.31173226792462,14.7001936508906,34.3195937204264,20.3147189576188,24.0820922227947,39.411509698078,35.5183652178392,33.9857247121808,12.9673722514845,12.2666086775613,9.17733760808408,10.9534788208725,5.01457859675027,3.95435128922049,8.1660557611199,5.73944328663986,1.43752564364972,40.2678254538567,37.7188313845899,37.642505503956,14.1492689819771,17.7650732762029,15.9858348606007,8.6996078169627,10.0508286061686,6.33831403506179,5.42151251310611,3.55717918444456,5.84934816232909,5.93319817540185,4.9733608046227,5.09320187881288,2.30530983192933,9.64313394468842,8.91039192989158,7.78202357000113,7.9982275633065,8.1721360152097,7.34944795289724,9.87208351487835,10.1114066527102,20.9220173898839,12.6410464704336,14.2854075928306,6.59431438650969,7.13603620098795,7.8137005583514,8.37548997004143,15.757353080887,10.8486755921535,14.7314292736834,12.9558229527184,9.69277118291563,10.7531194533121,10.0510174942025,43.7695377939533,18.0689014166091,13.599426674155,10.2543606411185,12.9955283489534,15.2329141613094,14.6062196937022,6.64678258054425,5.97507810586598,6.71345191569646,14.7885590765515,7.69958864485907,30.5766287647975,7.11066703153331,15.3708639117962,19.0019899106324,22.2430755806505,15.8715592809493,27.4474156666002,18.5552673831031,12.4909435271618,10.6562917409249,14.2981608298756,13.1128697280782,23.0473865985981,16.5879900555172,22.9891319992968,20.2439099687876,15.0383793831479,17.1472860944254,23.8508839937225,22.7891368973554,7.45567044872489,26.3502717310392,24.0863712835473,10.2182822083437,16.1750418082992,15.5974710058286,14.7401463404755,15.1288545798871,22.4175295381127,11.0575829859321,12.1677024134594,14.8314965251592,14.9607392082883,15.412919991437,20.2660334062129,18.2878246796837,16.4269792981889,18.0979996062368,15.0939713836736,13.3343220571414,14.945156773844,15.5225962370787,21.9077527267276,18.5764894413032,19.6773621575431,27.4225572983357,10.993967639575,13.615637772083,18.8267702855425,13.1517439456545,12.2340789659263,17.4126083261083,17.4914815946752,19.1072896145753,14.7464769335779,14.9261786126535,17.0498099637356,17.8128164380532,17.5894544985822,17.4660199617184,17.0456209621351,18.2990735525086,16.6608481918369,13.9520366850245,18.2425912951741,22.4189457344965,19.9117418395311,18.2225885127796,21.0778904819225,25.7311977868585,18.6617597997393,22.009852676701,13.6688466566683,12.657267322652,17.1817767151575,19.3048913664387,14.2903127858607,14.1664369834868,15.5929628199733,16.7397325437374,18.2349995952794,13.5060194539917,15.6594590309689,13.6700132420929,18.0961350336194,16.1154742353332,17.5467678407208,31.4586793028978,17.9394581395996,15.9313018603494,9.67306294860717,16.7945313536301,16.9061603509621,17.514014194697,16.0980564349129,24.1267220422696,15.5561881325673,15.0562350939194,16.9558626068685,15.5480426541469,14.8226313543574,22.5240892716727,14.545365638377,22.2613491261005,20.0831520174618,16.4000468631643,16.5506803657923,16.686375972147,21.0775794807546,12.0807021802756,25.8782771749238,16.3742016974142,14.0416952901552,17.9331003342449,14.7105879087968,15.4381926836277,22.5398892003258,11.3694847062291,11.8964432802679,13.0703716046895,18.5405296147917,23.1158635269706,19.2815349117671,20.4890330250689,20.8078390220172,18.6030339304971,19.4534817762134,17.8611013040154,18.131923095919,17.7918342055259,7.53956419696361,15.7732648307426,14.7529281905711,21.5230662117691,13.4862495589745,14.6514608240254,8.19674726883377,21.9649706667804,12.9358369960665,15.6175497718655,16.1567548299599,13.3822526853429,15.3731085116852,17.5507449089076,12.1443210502468,14.9050487534769,11.8586333383957,17.3513510867776,21.0071326108238,11.5742642383716,22.9670612688542,18.9715641418416,18.5843193675948,11.8962511715941,14.8138542912728,14.7111962209601,6.79194353625777,17.5238034328039,24.550687850981,13.8142817201452,18.8943610543902,18.962205476149,13.7044191147498,11.3449097573006,17.3624198934432,15.3051929926614,7.89087971074802,15.4322665222746,14.3645589250242,19.7989387538298,17.2776471632227,17.6589670486468,17.6003781047783,18.0057260234247,18.5243854366168,23.2489616647487,23.2508774442104,20.2651427758604,20.6514155125426,21.9948805658382,14.8655226681224,15.9465759729038,23.7510524309015,15.2726282292785,18.7046472643409,23.3576886685817,30.6195070095096,23.5641518402718,23.2870449091582,17.0740771834863,22.3883957563167,3.81868247206045,14.3932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| |||
|short_description=p1@Kdm5a | |||
}} |
Revision as of 08:43, 14 September 2013
Short description: | p1@Kdm5a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kdm5a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000005108, ENSMUST00000100996, ENSMUST00000135802, ENSMUST00000152293, NM_145997, uc009dnd.2, uc009dne.2, uc009dnf.2, uc009dng.2_5end |
EntrezGene: | Kdm5a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 2.67e-07 | 25 |
megakaryocyte-erythroid progenitor cell | 5.42e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mixed endoderm/mesoderm-derived structure | 1.42e-07 | 35 |
primordium | 1.53e-07 | 134 |
hemopoietic organ | 5.74e-07 | 29 |
immune organ | 5.74e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.