FFCP PHASE1:Mm9::chr1:178804530..178804541,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:178804530..178804541,+|id=chr1:178804530..178804541,+|ontology_enrichment_celltype=CL:0002563!2.22e-10!9;CL:0002251!2.22e-10!9;CL:0000473!2.79e-09!3;CL:0000627!2.79e-09!3;CL:0000682!2.79e-09!3;CL:0000066!3.71e-09!25;CL:0000239!6.97e-08!6;CL:0000677!6.97e-08!6;CL:0000212!6.97e-08!6;CL:0000584!6.97e-08!6;CL:0000075!9.66e-07!7|ontology_enrichment_celltype_v019_2=CL:0000682,9.40e-25,3;CL:0000239,7.27e-22,6;CL:0000677,7.27e-22,6;CL:0000584,7.27e-22,6;CL:0000075,8.38e-19,7;CL:0000066,1.73e-15,25;CL:0002563,1.04e-14,9;CL:0002251,1.04e-14,9;CL:0000473,5.38e-11,7;CL:0002076,5.96e-09,15;CL:0000223,8.99e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.96e-13!15;UBERON:0002107!3.18e-12!22;UBERON:0007499!3.18e-12!22;UBERON:0006925!3.18e-12!22;UBERON:0009497!3.18e-12!22;UBERON:0000015!3.18e-12!22;UBERON:0002423!3.18e-12!22;UBERON:0006235!3.18e-12!22;UBERON:0008835!3.18e-12!22;UBERON:0003894!3.18e-12!22;UBERON:0004161!3.18e-12!22;UBERON:0008836!3.18e-12!22;UBERON:0009854!1.36e-11!23;UBERON:0009856!1.36e-11!23;UBERON:0003929!1.59e-11!55;UBERON:0002365!1.75e-10!25;UBERON:0002330!1.75e-10!25;UBERON:0003350!2.22e-10!9;UBERON:0004808!2.22e-10!9;UBERON:0001277!2.22e-10!9;UBERON:0005911!1.93e-09!69;UBERON:0001242!2.59e-09!13;UBERON:0000060!2.59e-09!13;UBERON:0001262!2.59e-09!13;UBERON:0004786!2.59e-09!13;UBERON:0000490!6.40e-09!66;UBERON:0000485!2.35e-08!11;UBERON:0001007!4.99e-08!128;UBERON:0001555!4.99e-08!128;UBERON:0007026!4.99e-08!128;UBERON:0004119!8.13e-08!130;UBERON:0000925!8.13e-08!130;UBERON:0006595!8.13e-08!130;UBERON:0004923!1.47e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.04e-14,9;UBERON:0004808,1.04e-14,9;UBERON:0001277,1.04e-14,9;UBERON:0000344,2.14e-13,15;UBERON:0000485,4.24e-12,11;UBERON:0001242,2.76e-10,13;UBERON:0001262,2.76e-10,13;UBERON:0004786,2.76e-10,13;UBERON:0004923,2.18e-08,24;UBERON:0003929,8.58e-07,55|phase1_expression=0,6.63053274514786,4.54999239389536,0,0,2.68606835059024,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,0.91763712426868,4.01962374880514,3.01533397311352,5.38678081714723,0,0,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0.405720242777006,0,0.50925170356284,0.287696137450811,0,0.549122826376163,5.75072826109418,2.23284568601102,3.12037673114561,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:178804530..178804541,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:178804530..178804541,+ | |||
|id=chr1:178804530..178804541,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.22e-10!9;CL:0002251!2.22e-10!9;CL:0000473!2.79e-09!3;CL:0000627!2.79e-09!3;CL:0000682!2.79e-09!3;CL:0000066!3.71e-09!25;CL:0000239!6.97e-08!6;CL:0000677!6.97e-08!6;CL:0000212!6.97e-08!6;CL:0000584!6.97e-08!6;CL:0000075!9.66e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,9.40e-25,3;CL:0000239,7.27e-22,6;CL:0000677,7.27e-22,6;CL:0000584,7.27e-22,6;CL:0000075,8.38e-19,7;CL:0000066,1.73e-15,25;CL:0002563,1.04e-14,9;CL:0002251,1.04e-14,9;CL:0000473,5.38e-11,7;CL:0002076,5.96e-09,15;CL:0000223,8.99e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.96e-13!15;UBERON:0002107!3.18e-12!22;UBERON:0007499!3.18e-12!22;UBERON:0006925!3.18e-12!22;UBERON:0009497!3.18e-12!22;UBERON:0000015!3.18e-12!22;UBERON:0002423!3.18e-12!22;UBERON:0006235!3.18e-12!22;UBERON:0008835!3.18e-12!22;UBERON:0003894!3.18e-12!22;UBERON:0004161!3.18e-12!22;UBERON:0008836!3.18e-12!22;UBERON:0009854!1.36e-11!23;UBERON:0009856!1.36e-11!23;UBERON:0003929!1.59e-11!55;UBERON:0002365!1.75e-10!25;UBERON:0002330!1.75e-10!25;UBERON:0003350!2.22e-10!9;UBERON:0004808!2.22e-10!9;UBERON:0001277!2.22e-10!9;UBERON:0005911!1.93e-09!69;UBERON:0001242!2.59e-09!13;UBERON:0000060!2.59e-09!13;UBERON:0001262!2.59e-09!13;UBERON:0004786!2.59e-09!13;UBERON:0000490!6.40e-09!66;UBERON:0000485!2.35e-08!11;UBERON:0001007!4.99e-08!128;UBERON:0001555!4.99e-08!128;UBERON:0007026!4.99e-08!128;UBERON:0004119!8.13e-08!130;UBERON:0000925!8.13e-08!130;UBERON:0006595!8.13e-08!130;UBERON:0004923!1.47e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.04e-14,9;UBERON:0004808,1.04e-14,9;UBERON:0001277,1.04e-14,9;UBERON:0000344,2.14e-13,15;UBERON:0000485,4.24e-12,11;UBERON:0001242,2.76e-10,13;UBERON:0001262,2.76e-10,13;UBERON:0004786,2.76e-10,13;UBERON:0004923,2.18e-08,24;UBERON:0003929,8.58e-07,55 | |||
|phase1_expression=0,6.63053274514786,4.54999239389536,0,0,2.68606835059024,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,0.91763712426868,4.01962374880514,3.01533397311352,5.38678081714723,0,0,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0.405720242777006,0,0.50925170356284,0.287696137450811,0,0.549122826376163,5.75072826109418,2.23284568601102,3.12037673114561,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:178804530..178804541,+ | |||
}} |
Revision as of 19:51, 13 September 2013
Short description: | p@chr1:178804530..178804541, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:178804530..178804541, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 9.40e-25 | 3 |
brush border epithelial cell | 7.27e-22 | 6 |
gut absorptive cell | 7.27e-22 | 6 |
enterocyte | 7.27e-22 | 6 |
columnar/cuboidal epithelial cell | 8.38e-19 | 7 |
epithelial cell | 1.73e-15 | 25 |
intestinal epithelial cell | 1.04e-14 | 9 |
epithelial cell of alimentary canal | 1.04e-14 | 9 |
defensive cell | 5.38e-11 | 7 |
endo-epithelial cell | 5.96e-09 | 15 |
endodermal cell | 8.99e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.04e-14 | 9 |
gastrointestinal system epithelium | 1.04e-14 | 9 |
intestinal epithelium | 1.04e-14 | 9 |
mucosa | 2.14e-13 | 15 |
simple columnar epithelium | 4.24e-12 | 11 |
intestinal mucosa | 2.76e-10 | 13 |
wall of intestine | 2.76e-10 | 13 |
gastrointestinal system mucosa | 2.76e-10 | 13 |
organ component layer | 2.18e-08 | 24 |
gut epithelium | 8.58e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.