FFCP PHASE1:Mm9::chr2:19831396..19831412,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=208618|HGNC=|MCL_coexpression_id=1|UniProt=Q8BHR1|association_with_transcript=0bp_to_ENSMUST00000114610,uc008imk.1_5end|description=CAGE_peak_7_at_Etl4_5end|id=chr2:19831396..19831412,+|ontology_enrichment_celltype=CL:0000540!2.17e-11!33;CL:0000047!2.17e-11!33;CL:0000031!2.17e-11!33;CL:0000404!2.17e-11!33;CL:0000393!2.56e-08!39;CL:0000211!2.56e-08!39;CL:0000117!1.32e-07!23;CL:0000337!1.32e-07!23;CL:0002319!8.29e-07!43|ontology_enrichment_celltype_v019_2=CL:0000540,1.13e-14,33;CL:0000047,1.13e-14,33;CL:0000031,1.13e-14,33;CL:0000404,1.13e-14,33;CL:0000393,8.36e-12,39;CL:0000211,8.36e-12,39;CL:0002319,2.42e-10,43;CL:0000221,5.10e-10,44;CL:0000133,5.10e-10,44;CL:0000107,1.49e-09,9;CL:0000117,5.45e-08,23;CL:0000337,5.45e-08,23;CL:0002610,5.91e-08,3;CL:0002614,2.35e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.69e-19!73;UBERON:0005743!1.69e-19!73;UBERON:0000073!1.75e-18!75;UBERON:0001016!1.75e-18!75;UBERON:0002346!6.93e-17!71;UBERON:0003075!6.93e-17!71;UBERON:0007284!6.93e-17!71;UBERON:0004121!1.09e-16!102;UBERON:0000924!1.09e-16!102;UBERON:0006601!1.09e-16!102;UBERON:0002020!9.43e-15!34;UBERON:0001049!1.47e-14!52;UBERON:0005068!1.47e-14!52;UBERON:0006241!1.47e-14!52;UBERON:0007135!1.47e-14!52;UBERON:0000955!1.38e-13!50;UBERON:0006238!1.38e-13!50;UBERON:0002616!8.61e-13!49;UBERON:0000033!1.09e-12!63;UBERON:0002791!3.69e-11!29;UBERON:0003528!3.69e-11!29;UBERON:0001893!3.69e-11!29;UBERON:0002021!1.14e-10!10;UBERON:0000411!1.14e-10!10;UBERON:0001950!1.14e-10!10;UBERON:0003056!7.58e-10!49;UBERON:0002619!1.44e-09!17;UBERON:0000956!5.44e-09!21;UBERON:0001869!5.44e-09!21;UBERON:0000203!5.44e-09!21;UBERON:0003080!6.23e-09!40;UBERON:0002780!2.56e-08!39;UBERON:0001890!2.56e-08!39;UBERON:0006240!2.56e-08!39;UBERON:0003076!3.58e-07!12;UBERON:0003057!3.58e-07!12;UBERON:0007811!8.20e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.50e-39,73;UBERON:0001016,6.40e-38,75;UBERON:0000073,9.56e-32,54;UBERON:0004121,3.22e-28,95;UBERON:0000924,3.22e-28,95;UBERON:0006601,3.22e-28,95;UBERON:0001049,4.37e-28,52;UBERON:0005068,4.37e-28,52;UBERON:0006241,4.37e-28,52;UBERON:0007135,4.37e-28,52;UBERON:0002346,5.19e-25,64;UBERON:0003075,5.19e-25,64;UBERON:0007284,5.19e-25,64;UBERON:0000955,1.18e-22,47;UBERON:0006238,1.18e-22,47;UBERON:0002020,1.71e-22,34;UBERON:0002021,1.80e-22,10;UBERON:0000411,1.80e-22,10;UBERON:0001950,1.80e-22,10;UBERON:0010371,4.82e-21,73;UBERON:0002616,5.64e-21,46;UBERON:0003528,5.79e-17,29;UBERON:0002791,5.79e-17,29;UBERON:0001893,5.79e-17,29;UBERON:0003080,1.94e-16,40;UBERON:0010314,3.20e-15,92;UBERON:0002780,4.23e-15,39;UBERON:0001890,4.23e-15,39;UBERON:0006240,4.23e-15,39;UBERON:0002619,8.51e-15,17;UBERON:0000956,6.87e-14,21;UBERON:0001869,6.87e-14,21;UBERON:0000203,6.87e-14,21;UBERON:0003076,3.09e-13,12;UBERON:0003057,3.09e-13,12;UBERON:0003056,1.51e-12,49;UBERON:0002410,1.49e-09,9;UBERON:0011216,1.51e-09,194;UBERON:0002950,3.75e-09,4;UBERON:0001891,3.75e-09,4;UBERON:0009616,3.75e-09,4;UBERON:0010286,3.75e-09,4;UBERON:0000025,3.88e-09,114;UBERON:0002240,4.84e-09,6;UBERON:0005174,4.84e-09,6;UBERON:0001137,4.84e-09,6;UBERON:0004111,4.14e-08,122;UBERON:0004684,5.91e-08,3;UBERON:0002275,5.91e-08,3;UBERON:0000010,1.18e-07,11;UBERON:0002038,2.35e-07,3;UBERON:0009663,2.35e-07,3;UBERON:0009661,2.35e-07,3;UBERON:0000125,2.35e-07,3;UBERON:0002308,2.35e-07,3;UBERON:0001948,3.52e-07,5;UBERON:0002315,3.52e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,4.28476476605705,2.65042249141936,0,0.191690942036473,0.919218786610021,4.40463523997555,6.76742891851495,7.68032666281217,0.263772575460388,0.0914876436024097,0,5.862842979029,2.25105044012672,4.43114918552749,5.00868595305235,2.42031857358475,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0.461230994512117,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,2.92780797011547,3.35114730901528,0,0,0,0,3.2953940669061,1.83000241127451,0,7.12679712788333,4.85859368927628,3.1168206683934,5.51620294430376,0.203678727700633,0,0,0,0,0.459804208866946,0.360124259610698,0.150704817835715,0.204109497453984,0.12811372028485,0.374806898238915,0,0,0,0.351902248327898,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,3.15434922846191,0.514523061896422,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,1.02823661348756,0,0.407302655690628,0.193952487167626,0.631222379012867,0.758838445491087,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0.478364305972461,0,0,0,0,0,0,0,3.37156238974363,3.7507739709505,0,0,0,1.56175497718655,1.72338718186239,0.716906393857656,1.11399337041197,2.26461224631066,1.61924280669958,1.75353514746787,1.97643888973262,8.03303291054518,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,4.26478194624172,0,0.206386867963223,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.598066184175915,0.165458490457098,0.388902376688095,0.258319646955462,0.675824501963113,0.234714477291508,0.13020438484395,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,2.82375921308533,4.14292712856459,5.15605962095457,3.43706364687375,8.90607275701835,3.7769694869485,8.10027000278167,7.20513925158753,8.15656336171568,10.3552062350364,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.320125762024346,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.25384382367503,0,0,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p7@Etl4}} | ||
|EntrezGene=208618 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8BHR1 | |||
|association_with_transcript=0bp_to_ENSMUST00000114610,uc008imk.1_5end | |||
|description=CAGE_peak_7_at_Etl4_5end | |||
|id=chr2:19831396..19831412,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.17e-11!33;CL:0000047!2.17e-11!33;CL:0000031!2.17e-11!33;CL:0000404!2.17e-11!33;CL:0000393!2.56e-08!39;CL:0000211!2.56e-08!39;CL:0000117!1.32e-07!23;CL:0000337!1.32e-07!23;CL:0002319!8.29e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.13e-14,33;CL:0000047,1.13e-14,33;CL:0000031,1.13e-14,33;CL:0000404,1.13e-14,33;CL:0000393,8.36e-12,39;CL:0000211,8.36e-12,39;CL:0002319,2.42e-10,43;CL:0000221,5.10e-10,44;CL:0000133,5.10e-10,44;CL:0000107,1.49e-09,9;CL:0000117,5.45e-08,23;CL:0000337,5.45e-08,23;CL:0002610,5.91e-08,3;CL:0002614,2.35e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.69e-19!73;UBERON:0005743!1.69e-19!73;UBERON:0000073!1.75e-18!75;UBERON:0001016!1.75e-18!75;UBERON:0002346!6.93e-17!71;UBERON:0003075!6.93e-17!71;UBERON:0007284!6.93e-17!71;UBERON:0004121!1.09e-16!102;UBERON:0000924!1.09e-16!102;UBERON:0006601!1.09e-16!102;UBERON:0002020!9.43e-15!34;UBERON:0001049!1.47e-14!52;UBERON:0005068!1.47e-14!52;UBERON:0006241!1.47e-14!52;UBERON:0007135!1.47e-14!52;UBERON:0000955!1.38e-13!50;UBERON:0006238!1.38e-13!50;UBERON:0002616!8.61e-13!49;UBERON:0000033!1.09e-12!63;UBERON:0002791!3.69e-11!29;UBERON:0003528!3.69e-11!29;UBERON:0001893!3.69e-11!29;UBERON:0002021!1.14e-10!10;UBERON:0000411!1.14e-10!10;UBERON:0001950!1.14e-10!10;UBERON:0003056!7.58e-10!49;UBERON:0002619!1.44e-09!17;UBERON:0000956!5.44e-09!21;UBERON:0001869!5.44e-09!21;UBERON:0000203!5.44e-09!21;UBERON:0003080!6.23e-09!40;UBERON:0002780!2.56e-08!39;UBERON:0001890!2.56e-08!39;UBERON:0006240!2.56e-08!39;UBERON:0003076!3.58e-07!12;UBERON:0003057!3.58e-07!12;UBERON:0007811!8.20e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.50e-39,73;UBERON:0001016,6.40e-38,75;UBERON:0000073,9.56e-32,54;UBERON:0004121,3.22e-28,95;UBERON:0000924,3.22e-28,95;UBERON:0006601,3.22e-28,95;UBERON:0001049,4.37e-28,52;UBERON:0005068,4.37e-28,52;UBERON:0006241,4.37e-28,52;UBERON:0007135,4.37e-28,52;UBERON:0002346,5.19e-25,64;UBERON:0003075,5.19e-25,64;UBERON:0007284,5.19e-25,64;UBERON:0000955,1.18e-22,47;UBERON:0006238,1.18e-22,47;UBERON:0002020,1.71e-22,34;UBERON:0002021,1.80e-22,10;UBERON:0000411,1.80e-22,10;UBERON:0001950,1.80e-22,10;UBERON:0010371,4.82e-21,73;UBERON:0002616,5.64e-21,46;UBERON:0003528,5.79e-17,29;UBERON:0002791,5.79e-17,29;UBERON:0001893,5.79e-17,29;UBERON:0003080,1.94e-16,40;UBERON:0010314,3.20e-15,92;UBERON:0002780,4.23e-15,39;UBERON:0001890,4.23e-15,39;UBERON:0006240,4.23e-15,39;UBERON:0002619,8.51e-15,17;UBERON:0000956,6.87e-14,21;UBERON:0001869,6.87e-14,21;UBERON:0000203,6.87e-14,21;UBERON:0003076,3.09e-13,12;UBERON:0003057,3.09e-13,12;UBERON:0003056,1.51e-12,49;UBERON:0002410,1.49e-09,9;UBERON:0011216,1.51e-09,194;UBERON:0002950,3.75e-09,4;UBERON:0001891,3.75e-09,4;UBERON:0009616,3.75e-09,4;UBERON:0010286,3.75e-09,4;UBERON:0000025,3.88e-09,114;UBERON:0002240,4.84e-09,6;UBERON:0005174,4.84e-09,6;UBERON:0001137,4.84e-09,6;UBERON:0004111,4.14e-08,122;UBERON:0004684,5.91e-08,3;UBERON:0002275,5.91e-08,3;UBERON:0000010,1.18e-07,11;UBERON:0002038,2.35e-07,3;UBERON:0009663,2.35e-07,3;UBERON:0009661,2.35e-07,3;UBERON:0000125,2.35e-07,3;UBERON:0002308,2.35e-07,3;UBERON:0001948,3.52e-07,5;UBERON:0002315,3.52e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,4.28476476605705,2.65042249141936,0,0.191690942036473,0.919218786610021,4.40463523997555,6.76742891851495,7.68032666281217,0.263772575460388,0.0914876436024097,0,5.862842979029,2.25105044012672,4.43114918552749,5.00868595305235,2.42031857358475,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0.461230994512117,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,2.92780797011547,3.35114730901528,0,0,0,0,3.2953940669061,1.83000241127451,0,7.12679712788333,4.85859368927628,3.1168206683934,5.51620294430376,0.203678727700633,0,0,0,0,0.459804208866946,0.360124259610698,0.150704817835715,0.204109497453984,0.12811372028485,0.374806898238915,0,0,0,0.351902248327898,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,3.15434922846191,0.514523061896422,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,1.02823661348756,0,0.407302655690628,0.193952487167626,0.631222379012867,0.758838445491087,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0.478364305972461,0,0,0,0,0,0,0,3.37156238974363,3.7507739709505,0,0,0,1.56175497718655,1.72338718186239,0.716906393857656,1.11399337041197,2.26461224631066,1.61924280669958,1.75353514746787,1.97643888973262,8.03303291054518,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,4.26478194624172,0,0.206386867963223,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.598066184175915,0.165458490457098,0.388902376688095,0.258319646955462,0.675824501963113,0.234714477291508,0.13020438484395,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,2.82375921308533,4.14292712856459,5.15605962095457,3.43706364687375,8.90607275701835,3.7769694869485,8.10027000278167,7.20513925158753,8.15656336171568,10.3552062350364,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.320125762024346,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.25384382367503,0,0,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p7@Etl4 | |||
}} |
Revision as of 23:19, 13 September 2013
Short description: | p7@Etl4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Etl4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000114610, uc008imk.1_5end |
EntrezGene: | Etl4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.13e-14 | 33 |
neuronal stem cell | 1.13e-14 | 33 |
neuroblast | 1.13e-14 | 33 |
electrically signaling cell | 1.13e-14 | 33 |
electrically responsive cell | 8.36e-12 | 39 |
electrically active cell | 8.36e-12 | 39 |
neural cell | 2.42e-10 | 43 |
ectodermal cell | 5.10e-10 | 44 |
neurectodermal cell | 5.10e-10 | 44 |
autonomic neuron | 1.49e-09 | 9 |
CNS neuron (sensu Vertebrata) | 5.45e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.45e-08 | 23 |
raphe nuclei neuron | 5.91e-08 | 3 |
neuron of the substantia nigra | 2.35e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.