FFCP PHASE1:Mm9::chr10:50622895..50622905,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=409|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:50622895..50622905,+|id=chr10:50622895..50622905,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!2.67e-29!14;UBERON:0003918!2.67e-29!14;UBERON:0005095!2.67e-29!14;UBERON:0007687!2.67e-29!14;UBERON:0006554!3.10e-25!16;UBERON:0001008!1.46e-23!17;UBERON:0000489!1.83e-18!21;UBERON:0001301!7.33e-08!3;UBERON:0006555!7.33e-08!3;UBERON:0005103!7.33e-08!3;UBERON:0000083!7.33e-08!3;UBERON:0009201!7.33e-08!3;UBERON:0004819!7.33e-08!3;UBERON:0006553!7.33e-08!3;UBERON:0003074!7.33e-08!3;UBERON:0003060!7.33e-08!3;UBERON:0003103!1.90e-07!43;UBERON:0005172!3.30e-07!49;UBERON:0005173!3.30e-07!49;UBERON:0002417!3.30e-07!49;UBERON:0000916!3.30e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002113,9.89e-56,14;UBERON:0003918,9.89e-56,14;UBERON:0011143,9.89e-56,14;UBERON:0005095,9.89e-56,14;UBERON:0007687,9.89e-56,14;UBERON:0006554,2.31e-43,18;UBERON:0001008,4.40e-41,19;UBERON:0000489,3.58e-37,21;UBERON:0003103,4.15e-18,43;UBERON:0005172,7.21e-16,49;UBERON:0005173,7.21e-16,49;UBERON:0002417,7.21e-16,49;UBERON:0000916,7.21e-16,49;UBERON:0003104,1.06e-12,61;UBERON:0009142,1.06e-12,61;UBERON:0009569,1.02e-11,66;UBERON:0005177,9.73e-10,79;UBERON:0002100,1.67e-08,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569003702859245,1.25673363870702,3.38123207019241,1.62921062276251,1.93952487167626,2.73529697572242,5.05892296994058,1.77132177575523,2.19798218977925,2.09775178667061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0.302323556964751,0,0,0,0.775284879504663,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr10:50622895..50622905,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=409 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:50622895..50622905,+ | |||
|id=chr10:50622895..50622905,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!2.67e-29!14;UBERON:0003918!2.67e-29!14;UBERON:0005095!2.67e-29!14;UBERON:0007687!2.67e-29!14;UBERON:0006554!3.10e-25!16;UBERON:0001008!1.46e-23!17;UBERON:0000489!1.83e-18!21;UBERON:0001301!7.33e-08!3;UBERON:0006555!7.33e-08!3;UBERON:0005103!7.33e-08!3;UBERON:0000083!7.33e-08!3;UBERON:0009201!7.33e-08!3;UBERON:0004819!7.33e-08!3;UBERON:0006553!7.33e-08!3;UBERON:0003074!7.33e-08!3;UBERON:0003060!7.33e-08!3;UBERON:0003103!1.90e-07!43;UBERON:0005172!3.30e-07!49;UBERON:0005173!3.30e-07!49;UBERON:0002417!3.30e-07!49;UBERON:0000916!3.30e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,9.89e-56,14;UBERON:0003918,9.89e-56,14;UBERON:0011143,9.89e-56,14;UBERON:0005095,9.89e-56,14;UBERON:0007687,9.89e-56,14;UBERON:0006554,2.31e-43,18;UBERON:0001008,4.40e-41,19;UBERON:0000489,3.58e-37,21;UBERON:0003103,4.15e-18,43;UBERON:0005172,7.21e-16,49;UBERON:0005173,7.21e-16,49;UBERON:0002417,7.21e-16,49;UBERON:0000916,7.21e-16,49;UBERON:0003104,1.06e-12,61;UBERON:0009142,1.06e-12,61;UBERON:0009569,1.02e-11,66;UBERON:0005177,9.73e-10,79;UBERON:0002100,1.67e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569003702859245,1.25673363870702,3.38123207019241,1.62921062276251,1.93952487167626,2.73529697572242,5.05892296994058,1.77132177575523,2.19798218977925,2.09775178667061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0.302323556964751,0,0,0,0.775284879504663,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:50622895..50622905,+ | |||
}} |
Revision as of 16:51, 12 September 2013
Short description: | p@chr10:50622895..50622905, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:50622895..50622905, + |
Coexpression cluster: | MCL_coexpression_mm9:409 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 9.89e-56 | 14 |
kidney mesenchyme | 9.89e-56 | 14 |
upper urinary tract | 9.89e-56 | 14 |
kidney rudiment | 9.89e-56 | 14 |
kidney field | 9.89e-56 | 14 |
urinary system structure | 2.31e-43 | 18 |
renal system | 4.40e-41 | 19 |
cavitated compound organ | 3.58e-37 | 21 |
compound organ | 4.15e-18 | 43 |
abdomen element | 7.21e-16 | 49 |
abdominal segment element | 7.21e-16 | 49 |
abdominal segment of trunk | 7.21e-16 | 49 |
abdomen | 7.21e-16 | 49 |
mesenchyme | 1.06e-12 | 61 |
entire embryonic mesenchyme | 1.06e-12 | 61 |
subdivision of trunk | 1.02e-11 | 66 |
trunk region element | 9.73e-10 | 79 |
trunk | 1.67e-08 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.