FFCP PHASE1:Mm9::chr6:70621753..70621781,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=929|UniProt=|association_with_transcript=-1bp_to_ENSMUST00000103401_5end|description=CAGE_peak_1_at_ENSMUST00000103401_5end|id=chr6:70621753..70621781,+|ontology_enrichment_celltype=CL:0000553!3.29e-18!6;CL:0000556!3.29e-18!6;CL:0000050!6.42e-12!9;CL:0002027!1.22e-09!3;CL:0002006!1.22e-09!3;CL:0002024!1.22e-09!3;CL:0000414!1.26e-09!11;CL:0000839!4.86e-08!13|ontology_enrichment_celltype_v019_2=CL:0000553,5.07e-23,6;CL:0000556,5.07e-23,6;CL:0000050,2.39e-15,9;CL:0000839,1.32e-10,13;CL:0000763,1.35e-08,16;CL:0002027,3.61e-08,3;CL:0002006,3.61e-08,3;CL:0002024,3.61e-08,3;CL:0002031,1.17e-07,25;CL:0000049,3.23e-07,19;CL:0000945,5.34e-07,1;CL:0000236,5.34e-07,1;CL:0000826,5.34e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!1.90e-10!3;UBERON:0002193!2.59e-08!48;UBERON:0007023!1.98e-07!51;UBERON:0001962!2.01e-07!2;UBERON:0001961!2.01e-07!2;UBERON:0001744!2.01e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0002465,6.33e-18,3;UBERON:0001962,2.30e-12,2;UBERON:0001961,2.30e-12,2;UBERON:0001744,2.30e-12,2;UBERON:0002193,1.71e-10,48;UBERON:0002405,1.71e-10,48;UBERON:0002371,1.35e-08,16;UBERON:0007023,8.20e-08,51;UBERON:0000029,3.14e-07,1;UBERON:0001097,3.14e-07,1;UBERON:0003968,3.14e-07,1;UBERON:0001467,3.14e-07,1;UBERON:0003199,3.59e-07,1;UBERON:0001044,4.10e-07,1;UBERON:0001736,4.10e-07,1;UBERON:0003293,4.10e-07,1;UBERON:0003294,4.10e-07,1;UBERON:0001829,4.10e-07,1;UBERON:0010047,4.10e-07,1;UBERON:0000167,4.10e-07,1;UBERON:0006298,4.10e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,2.83465374345756,0.699561878128147,2.36596624018678,4.9361196098066,2.97072756258621,0.17008658030214,0,0,2.3998863419011,5.27641346454491,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35565212115473,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,12.9468941823586,0,0,0,0,0,0,0,0,0.289198713839823,0.884610551949874,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85115396664481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,26.655857404465,0,0,0,0.683471138605126,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97071450469541,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000103401}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=929 | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_ENSMUST00000103401_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000103401_5end | |||
|id=chr6:70621753..70621781,+ | |||
|ontology_enrichment_celltype=CL:0000553!3.29e-18!6;CL:0000556!3.29e-18!6;CL:0000050!6.42e-12!9;CL:0002027!1.22e-09!3;CL:0002006!1.22e-09!3;CL:0002024!1.22e-09!3;CL:0000414!1.26e-09!11;CL:0000839!4.86e-08!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,5.07e-23,6;CL:0000556,5.07e-23,6;CL:0000050,2.39e-15,9;CL:0000839,1.32e-10,13;CL:0000763,1.35e-08,16;CL:0002027,3.61e-08,3;CL:0002006,3.61e-08,3;CL:0002024,3.61e-08,3;CL:0002031,1.17e-07,25;CL:0000049,3.23e-07,19;CL:0000945,5.34e-07,1;CL:0000236,5.34e-07,1;CL:0000826,5.34e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!1.90e-10!3;UBERON:0002193!2.59e-08!48;UBERON:0007023!1.98e-07!51;UBERON:0001962!2.01e-07!2;UBERON:0001961!2.01e-07!2;UBERON:0001744!2.01e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,6.33e-18,3;UBERON:0001962,2.30e-12,2;UBERON:0001961,2.30e-12,2;UBERON:0001744,2.30e-12,2;UBERON:0002193,1.71e-10,48;UBERON:0002405,1.71e-10,48;UBERON:0002371,1.35e-08,16;UBERON:0007023,8.20e-08,51;UBERON:0000029,3.14e-07,1;UBERON:0001097,3.14e-07,1;UBERON:0003968,3.14e-07,1;UBERON:0001467,3.14e-07,1;UBERON:0003199,3.59e-07,1;UBERON:0001044,4.10e-07,1;UBERON:0001736,4.10e-07,1;UBERON:0003293,4.10e-07,1;UBERON:0003294,4.10e-07,1;UBERON:0001829,4.10e-07,1;UBERON:0010047,4.10e-07,1;UBERON:0000167,4.10e-07,1;UBERON:0006298,4.10e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,2.83465374345756,0.699561878128147,2.36596624018678,4.9361196098066,2.97072756258621,0.17008658030214,0,0,2.3998863419011,5.27641346454491,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35565212115473,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,12.9468941823586,0,0,0,0,0,0,0,0,0.289198713839823,0.884610551949874,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85115396664481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,26.655857404465,0,0,0,0.683471138605126,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97071450469541,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000103401 | |||
}} |
Revision as of 10:30, 14 September 2013
Short description: | p1@ENSMUST00000103401 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103401_5end |
Coexpression cluster: | MCL_coexpression_mm9:929 |
Association with transcript: | -1bp_to_ENSMUST00000103401_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 5.07e-23 | 6 |
megakaryocyte | 5.07e-23 | 6 |
megakaryocyte-erythroid progenitor cell | 2.39e-15 | 9 |
myeloid lineage restricted progenitor cell | 1.32e-10 | 13 |
myeloid cell | 1.35e-08 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 3.61e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.61e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.61e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 1.17e-07 | 25 |
common myeloid progenitor | 3.23e-07 | 19 |
lymphocyte of B lineage | 5.34e-07 | 1 |
B cell | 5.34e-07 | 1 |
pro-B cell | 5.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 6.33e-18 | 3 |
gut-associated lymphoid tissue | 2.30e-12 | 2 |
mucosa-associated lymphoid tissue | 2.30e-12 | 2 |
lymphoid tissue | 2.30e-12 | 2 |
hemolymphoid system | 1.71e-10 | 48 |
immune system | 1.71e-10 | 48 |
bone marrow | 1.35e-08 | 16 |
adult organism | 8.20e-08 | 51 |
lymph node | 3.14e-07 | 1 |
axillary lymph node | 3.14e-07 | 1 |
peripheral lymph node | 3.14e-07 | 1 |
shoulder | 3.14e-07 | 1 |
egg chamber | 3.59e-07 | 1 |
saliva-secreting gland | 4.10e-07 | 1 |
submandibular gland | 4.10e-07 | 1 |
gland of oral region | 4.10e-07 | 1 |
gland of foregut | 4.10e-07 | 1 |
major salivary gland | 4.10e-07 | 1 |
oral gland | 4.10e-07 | 1 |
oral cavity | 4.10e-07 | 1 |
submandibular gland primordium | 4.10e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.