FFCP PHASE1:Mm9::chr5:34338697..34338710,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=269642|HGNC=|MCL_coexpression_id=1|UniProt=Q3UGX3|association_with_transcript=64bp_to_ENSMUST00000056355,NM_001001985,uc008xbs.1_5end|description=CAGE_peak_2_at_Nat8l_5end|id=chr5:34338697..34338710,+|ontology_enrichment_celltype=CL:0000117!1.19e-18!23;CL:0000337!1.19e-18!23;CL:0000540!6.93e-11!33;CL:0000047!6.93e-11!33;CL:0000031!6.93e-11!33;CL:0000404!6.93e-11!33;CL:0000221!5.73e-10!44;CL:0000133!5.73e-10!44;CL:0002319!2.03e-09!43;CL:0000393!3.17e-08!39;CL:0000211!3.17e-08!39;CL:0000055!3.91e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.36e-12,23;CL:0000337,1.36e-12,23;CL:0002610,9.60e-11,3;CL:0002614,1.74e-10,3;CL:0000540,3.11e-08,33;CL:0000047,3.11e-08,33;CL:0000031,3.11e-08,33;CL:0000404,3.11e-08,33;CL:0002611,1.25e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.12e-28!52;UBERON:0005068!2.12e-28!52;UBERON:0006241!2.12e-28!52;UBERON:0007135!2.12e-28!52;UBERON:0002020!1.79e-27!34;UBERON:0001017!1.91e-27!73;UBERON:0005743!1.91e-27!73;UBERON:0000073!2.26e-27!75;UBERON:0001016!2.26e-27!75;UBERON:0000955!2.07e-26!50;UBERON:0006238!2.07e-26!50;UBERON:0002616!2.34e-25!49;UBERON:0000033!1.06e-22!63;UBERON:0002791!4.40e-22!29;UBERON:0003528!4.40e-22!29;UBERON:0001893!4.40e-22!29;UBERON:0004121!2.72e-21!102;UBERON:0000924!2.72e-21!102;UBERON:0006601!2.72e-21!102;UBERON:0002346!3.38e-21!71;UBERON:0003075!3.38e-21!71;UBERON:0007284!3.38e-21!71;UBERON:0003080!3.66e-21!40;UBERON:0002780!4.06e-20!39;UBERON:0001890!4.06e-20!39;UBERON:0006240!4.06e-20!39;UBERON:0003056!1.41e-18!49;UBERON:0000956!1.59e-14!21;UBERON:0001869!1.59e-14!21;UBERON:0000203!1.59e-14!21;UBERON:0007811!8.26e-14!86;UBERON:0002021!8.55e-12!10;UBERON:0000411!8.55e-12!10;UBERON:0001950!8.55e-12!10;UBERON:0002619!1.15e-11!17;UBERON:0000153!1.58e-11!94;UBERON:0002420!7.60e-09!8;UBERON:0007245!7.60e-09!8;UBERON:0010009!7.60e-09!8;UBERON:0010011!7.60e-09!8;UBERON:0000454!7.60e-09!8;UBERON:0002298!2.27e-08!6;UBERON:0002240!7.03e-08!6;UBERON:0005174!7.03e-08!6;UBERON:0001137!7.03e-08!6;UBERON:0003076!1.16e-07!12;UBERON:0003057!1.16e-07!12;UBERON:0000025!3.63e-07!114;UBERON:0004111!5.97e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.72e-28,54;UBERON:0001017,7.28e-26,73;UBERON:0001016,4.73e-25,75;UBERON:0001049,1.12e-23,52;UBERON:0005068,1.12e-23,52;UBERON:0006241,1.12e-23,52;UBERON:0007135,1.12e-23,52;UBERON:0002020,4.76e-21,34;UBERON:0002021,2.97e-19,10;UBERON:0000411,2.97e-19,10;UBERON:0001950,2.97e-19,10;UBERON:0004121,8.46e-19,95;UBERON:0000924,8.46e-19,95;UBERON:0006601,8.46e-19,95;UBERON:0000955,9.62e-19,47;UBERON:0006238,9.62e-19,47;UBERON:0002346,1.85e-18,64;UBERON:0003075,1.85e-18,64;UBERON:0007284,1.85e-18,64;UBERON:0002616,5.16e-17,46;UBERON:0003528,3.08e-16,29;UBERON:0002791,3.08e-16,29;UBERON:0001893,3.08e-16,29;UBERON:0010371,1.14e-15,73;UBERON:0003080,4.09e-15,40;UBERON:0002619,1.05e-13,17;UBERON:0000956,1.68e-13,21;UBERON:0001869,1.68e-13,21;UBERON:0000203,1.68e-13,21;UBERON:0002780,1.99e-13,39;UBERON:0001890,1.99e-13,39;UBERON:0006240,1.99e-13,39;UBERON:0002950,2.65e-13,4;UBERON:0001891,2.65e-13,4;UBERON:0009616,2.65e-13,4;UBERON:0010286,2.65e-13,4;UBERON:0003056,8.74e-12,49;UBERON:0010314,1.45e-11,92;UBERON:0004684,9.60e-11,3;UBERON:0002275,9.60e-11,3;UBERON:0002038,1.74e-10,3;UBERON:0009663,1.74e-10,3;UBERON:0009661,1.74e-10,3;UBERON:0000125,1.74e-10,3;UBERON:0002308,1.74e-10,3;UBERON:0003076,1.24e-09,12;UBERON:0003057,1.24e-09,12;UBERON:0002240,4.38e-09,6;UBERON:0005174,4.38e-09,6;UBERON:0001137,4.38e-09,6;UBERON:0000025,1.61e-08,114;UBERON:0001896,6.33e-08,2;UBERON:0002298,6.33e-08,2;UBERON:0005290,6.33e-08,2;UBERON:0010096,6.33e-08,2;UBERON:0004111,1.10e-07,122;UBERON:0002256,1.25e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,1.90149421051854,0,0,0,0.988866362566974,0,0.599200221036809,0.384218305321555,0.414758449233911,0.135005938331691,0.210324961351382,1.99955689082663,1.98781686856452,0.489963196859816,0.766763768145891,0,1.10115880999389,3.06449611404451,3.84016333140609,0.527545150920775,0.640413505216868,0.52091337055676,1.67509799400829,2.25105044012672,1.83357897332172,1.17851434189467,0.854230084794618,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0.628340120440365,0,0,0,0,1.64769703345305,0.457500602818626,0.502617408451458,2.08589184230732,1.27857728665165,1.87009240103604,0.973447578406546,0,0,0,0,0.130120442962704,0,0,0,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,2.46144541843627,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0.608929898229199,0,0,0,0,0,0,0.238744688006273,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0.221985953374065,1.07656627931371,0.167884616364078,0,0,0,0.214368379079066,0,1.12950368523413,0.460325236507177,1.14579102687879,2.57779773515531,1.37016503954128,2.2661816921691,1.35004500046361,2.2516060161211,0.906284817968409,1.03552062350364,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.17230640686684,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.394017929502254,0,0,0.192906610981141,0.249810577937946,0,0.429742108096597,0,0.220591419119515,0|short_description=p2@Nat8l}} | ||
|EntrezGene=269642 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q3UGX3 | |||
|association_with_transcript=64bp_to_ENSMUST00000056355,NM_001001985,uc008xbs.1_5end | |||
|description=CAGE_peak_2_at_Nat8l_5end | |||
|id=chr5:34338697..34338710,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.19e-18!23;CL:0000337!1.19e-18!23;CL:0000540!6.93e-11!33;CL:0000047!6.93e-11!33;CL:0000031!6.93e-11!33;CL:0000404!6.93e-11!33;CL:0000221!5.73e-10!44;CL:0000133!5.73e-10!44;CL:0002319!2.03e-09!43;CL:0000393!3.17e-08!39;CL:0000211!3.17e-08!39;CL:0000055!3.91e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.36e-12,23;CL:0000337,1.36e-12,23;CL:0002610,9.60e-11,3;CL:0002614,1.74e-10,3;CL:0000540,3.11e-08,33;CL:0000047,3.11e-08,33;CL:0000031,3.11e-08,33;CL:0000404,3.11e-08,33;CL:0002611,1.25e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.12e-28!52;UBERON:0005068!2.12e-28!52;UBERON:0006241!2.12e-28!52;UBERON:0007135!2.12e-28!52;UBERON:0002020!1.79e-27!34;UBERON:0001017!1.91e-27!73;UBERON:0005743!1.91e-27!73;UBERON:0000073!2.26e-27!75;UBERON:0001016!2.26e-27!75;UBERON:0000955!2.07e-26!50;UBERON:0006238!2.07e-26!50;UBERON:0002616!2.34e-25!49;UBERON:0000033!1.06e-22!63;UBERON:0002791!4.40e-22!29;UBERON:0003528!4.40e-22!29;UBERON:0001893!4.40e-22!29;UBERON:0004121!2.72e-21!102;UBERON:0000924!2.72e-21!102;UBERON:0006601!2.72e-21!102;UBERON:0002346!3.38e-21!71;UBERON:0003075!3.38e-21!71;UBERON:0007284!3.38e-21!71;UBERON:0003080!3.66e-21!40;UBERON:0002780!4.06e-20!39;UBERON:0001890!4.06e-20!39;UBERON:0006240!4.06e-20!39;UBERON:0003056!1.41e-18!49;UBERON:0000956!1.59e-14!21;UBERON:0001869!1.59e-14!21;UBERON:0000203!1.59e-14!21;UBERON:0007811!8.26e-14!86;UBERON:0002021!8.55e-12!10;UBERON:0000411!8.55e-12!10;UBERON:0001950!8.55e-12!10;UBERON:0002619!1.15e-11!17;UBERON:0000153!1.58e-11!94;UBERON:0002420!7.60e-09!8;UBERON:0007245!7.60e-09!8;UBERON:0010009!7.60e-09!8;UBERON:0010011!7.60e-09!8;UBERON:0000454!7.60e-09!8;UBERON:0002298!2.27e-08!6;UBERON:0002240!7.03e-08!6;UBERON:0005174!7.03e-08!6;UBERON:0001137!7.03e-08!6;UBERON:0003076!1.16e-07!12;UBERON:0003057!1.16e-07!12;UBERON:0000025!3.63e-07!114;UBERON:0004111!5.97e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.72e-28,54;UBERON:0001017,7.28e-26,73;UBERON:0001016,4.73e-25,75;UBERON:0001049,1.12e-23,52;UBERON:0005068,1.12e-23,52;UBERON:0006241,1.12e-23,52;UBERON:0007135,1.12e-23,52;UBERON:0002020,4.76e-21,34;UBERON:0002021,2.97e-19,10;UBERON:0000411,2.97e-19,10;UBERON:0001950,2.97e-19,10;UBERON:0004121,8.46e-19,95;UBERON:0000924,8.46e-19,95;UBERON:0006601,8.46e-19,95;UBERON:0000955,9.62e-19,47;UBERON:0006238,9.62e-19,47;UBERON:0002346,1.85e-18,64;UBERON:0003075,1.85e-18,64;UBERON:0007284,1.85e-18,64;UBERON:0002616,5.16e-17,46;UBERON:0003528,3.08e-16,29;UBERON:0002791,3.08e-16,29;UBERON:0001893,3.08e-16,29;UBERON:0010371,1.14e-15,73;UBERON:0003080,4.09e-15,40;UBERON:0002619,1.05e-13,17;UBERON:0000956,1.68e-13,21;UBERON:0001869,1.68e-13,21;UBERON:0000203,1.68e-13,21;UBERON:0002780,1.99e-13,39;UBERON:0001890,1.99e-13,39;UBERON:0006240,1.99e-13,39;UBERON:0002950,2.65e-13,4;UBERON:0001891,2.65e-13,4;UBERON:0009616,2.65e-13,4;UBERON:0010286,2.65e-13,4;UBERON:0003056,8.74e-12,49;UBERON:0010314,1.45e-11,92;UBERON:0004684,9.60e-11,3;UBERON:0002275,9.60e-11,3;UBERON:0002038,1.74e-10,3;UBERON:0009663,1.74e-10,3;UBERON:0009661,1.74e-10,3;UBERON:0000125,1.74e-10,3;UBERON:0002308,1.74e-10,3;UBERON:0003076,1.24e-09,12;UBERON:0003057,1.24e-09,12;UBERON:0002240,4.38e-09,6;UBERON:0005174,4.38e-09,6;UBERON:0001137,4.38e-09,6;UBERON:0000025,1.61e-08,114;UBERON:0001896,6.33e-08,2;UBERON:0002298,6.33e-08,2;UBERON:0005290,6.33e-08,2;UBERON:0010096,6.33e-08,2;UBERON:0004111,1.10e-07,122;UBERON:0002256,1.25e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,1.90149421051854,0,0,0,0.988866362566974,0,0.599200221036809,0.384218305321555,0.414758449233911,0.135005938331691,0.210324961351382,1.99955689082663,1.98781686856452,0.489963196859816,0.766763768145891,0,1.10115880999389,3.06449611404451,3.84016333140609,0.527545150920775,0.640413505216868,0.52091337055676,1.67509799400829,2.25105044012672,1.83357897332172,1.17851434189467,0.854230084794618,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0.628340120440365,0,0,0,0,1.64769703345305,0.457500602818626,0.502617408451458,2.08589184230732,1.27857728665165,1.87009240103604,0.973447578406546,0,0,0,0,0.130120442962704,0,0,0,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,2.46144541843627,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0.608929898229199,0,0,0,0,0,0,0.238744688006273,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0.221985953374065,1.07656627931371,0.167884616364078,0,0,0,0.214368379079066,0,1.12950368523413,0.460325236507177,1.14579102687879,2.57779773515531,1.37016503954128,2.2661816921691,1.35004500046361,2.2516060161211,0.906284817968409,1.03552062350364,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.17230640686684,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.394017929502254,0,0,0.192906610981141,0.249810577937946,0,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p2@Nat8l | |||
}} |
Revision as of 07:30, 14 September 2013
Short description: | p2@Nat8l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nat8l_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 64bp_to_ENSMUST00000056355, NM_001001985, uc008xbs.1_5end |
EntrezGene: | Nat8l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.36e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.36e-12 | 23 |
raphe nuclei neuron | 9.60e-11 | 3 |
neuron of the substantia nigra | 1.74e-10 | 3 |
neuron | 3.11e-08 | 33 |
neuronal stem cell | 3.11e-08 | 33 |
neuroblast | 3.11e-08 | 33 |
electrically signaling cell | 3.11e-08 | 33 |
neuron of the dorsal spinal cord | 1.25e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.