FFCP PHASE1:Mm9::chr19:34082790..34082800,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=240633|HGNC=|MCL_coexpression_id=795|UniProt=Q8BM14|association_with_transcript=10bp_to_ENSMUST00000054260,uc008hfx.1,uc012bkq.1,uc012bkr.1_5end|description=CAGE_peak_4_at_Lipk_5end|id=chr19:34082790..34082800,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!3.95e-11!5;UBERON:0001003!3.95e-11!5;UBERON:0002097!3.95e-11!5;UBERON:0002199!3.95e-11!5;UBERON:0007029!3.95e-11!5;UBERON:0007376!3.95e-11!5;UBERON:0002416!3.95e-11!5;UBERON:0007383!3.95e-11!5|ontology_enrichment_uberon_v019_2=UBERON:0000014,3.24e-23,5;UBERON:0001003,3.24e-23,5;UBERON:0002097,3.24e-23,5;UBERON:0002199,3.24e-23,5;UBERON:0007029,3.24e-23,5;UBERON:0007376,3.24e-23,5;UBERON:0002416,3.24e-23,5;UBERON:0007383,3.24e-23,5;UBERON:0003102,2.71e-16,22;UBERON:0000945,1.66e-10,16;UBERON:0010039,1.66e-10,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0.452114453507145,0,0,0,0,0,0,0,0,0,3.1342694986995,5.14455341019859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81374878235628,5.48979050766079,1.93001359770099,2.02932984805332,1.47726809770555,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,3.3454127362315,5.02233896616208,4.5853877770839,3.14083131756277,3.66458318777641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0,0,0,0,0.187682475451182,0,3.85863082342319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0,0,0,0.320919209591815,0,0.25347929989024,0.754505365544305,0.37456602987953,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0.355905054372522,0,0,0,1.35034627686799,0.999242311751784,1.16965804222704,1.07435527024149,0.382576664137687,0.220591419119515,0|short_description=p4@Lipk}} | ||
|EntrezGene=240633 | |||
|HGNC= | |||
|MCL_coexpression_id=795 | |||
|UniProt=Q8BM14 | |||
|association_with_transcript=10bp_to_ENSMUST00000054260,uc008hfx.1,uc012bkq.1,uc012bkr.1_5end | |||
|description=CAGE_peak_4_at_Lipk_5end | |||
|id=chr19:34082790..34082800,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!3.95e-11!5;UBERON:0001003!3.95e-11!5;UBERON:0002097!3.95e-11!5;UBERON:0002199!3.95e-11!5;UBERON:0007029!3.95e-11!5;UBERON:0007376!3.95e-11!5;UBERON:0002416!3.95e-11!5;UBERON:0007383!3.95e-11!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,3.24e-23,5;UBERON:0001003,3.24e-23,5;UBERON:0002097,3.24e-23,5;UBERON:0002199,3.24e-23,5;UBERON:0007029,3.24e-23,5;UBERON:0007376,3.24e-23,5;UBERON:0002416,3.24e-23,5;UBERON:0007383,3.24e-23,5;UBERON:0003102,2.71e-16,22;UBERON:0000945,1.66e-10,16;UBERON:0010039,1.66e-10,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0.452114453507145,0,0,0,0,0,0,0,0,0,3.1342694986995,5.14455341019859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81374878235628,5.48979050766079,1.93001359770099,2.02932984805332,1.47726809770555,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,3.3454127362315,5.02233896616208,4.5853877770839,3.14083131756277,3.66458318777641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0,0,0,0,0.187682475451182,0,3.85863082342319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0,0,0,0.320919209591815,0,0.25347929989024,0.754505365544305,0.37456602987953,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0.355905054372522,0,0,0,1.35034627686799,0.999242311751784,1.16965804222704,1.07435527024149,0.382576664137687,0.220591419119515,0 | |||
|short_description=p4@Lipk | |||
}} |
Revision as of 17:24, 13 September 2013
Short description: | p4@Lipk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Lipk_5end |
Coexpression cluster: | MCL_coexpression_mm9:795 |
Association with transcript: | 10bp_to_ENSMUST00000054260, uc008hfx.1, uc012bkq.1, uc012bkr.1_5end |
EntrezGene: | Lipk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 3.24e-23 | 5 |
skin epidermis | 3.24e-23 | 5 |
skin of body | 3.24e-23 | 5 |
integument | 3.24e-23 | 5 |
surface | 3.24e-23 | 5 |
outer epithelium | 3.24e-23 | 5 |
integumental system | 3.24e-23 | 5 |
enveloping layer of ectoderm | 3.24e-23 | 5 |
surface structure | 2.71e-16 | 22 |
stomach | 1.66e-10 | 16 |
food storage organ | 1.66e-10 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.