FFCP PHASE1:Mm9::chr19:7165239..7165242,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2276|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:7165239..7165242,-|id=chr19:7165239..7165242,-|ontology_enrichment_celltype=CL:0000540!3.86e-07!33;CL:0000047!3.86e-07!33;CL:0000031!3.86e-07!33;CL:0000404!3.86e-07!33;CL:0000117!6.06e-07!23;CL:0000337!6.06e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.03e-08,23;CL:0000337,2.03e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.78e-17!102;UBERON:0000924!1.78e-17!102;UBERON:0006601!1.78e-17!102;UBERON:0002346!5.13e-17!71;UBERON:0003075!5.13e-17!71;UBERON:0007284!5.13e-17!71;UBERON:0000033!4.34e-16!63;UBERON:0001017!3.08e-15!73;UBERON:0005743!3.08e-15!73;UBERON:0001049!1.46e-14!52;UBERON:0005068!1.46e-14!52;UBERON:0006241!1.46e-14!52;UBERON:0007135!1.46e-14!52;UBERON:0000073!1.92e-14!75;UBERON:0001016!1.92e-14!75;UBERON:0003056!2.35e-14!49;UBERON:0000955!6.58e-14!50;UBERON:0006238!6.58e-14!50;UBERON:0002616!1.77e-13!49;UBERON:0003080!1.66e-12!40;UBERON:0002780!4.02e-12!39;UBERON:0001890!4.02e-12!39;UBERON:0006240!4.02e-12!39;UBERON:0007811!1.96e-10!86;UBERON:0000153!4.16e-10!94;UBERON:0002020!1.75e-09!34;UBERON:0002791!1.49e-07!29;UBERON:0003528!1.49e-07!29;UBERON:0001893!1.49e-07!29;UBERON:0000991!7.18e-07!18;UBERON:0005564!7.18e-07!18;UBERON:0000468!9.46e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.73e-18,54;UBERON:0001049,2.79e-16,52;UBERON:0005068,2.79e-16,52;UBERON:0006241,2.79e-16,52;UBERON:0007135,2.79e-16,52;UBERON:0002780,4.03e-15,39;UBERON:0001890,4.03e-15,39;UBERON:0006240,4.03e-15,39;UBERON:0002616,1.01e-14,46;UBERON:0003080,1.34e-14,40;UBERON:0000955,2.82e-14,47;UBERON:0006238,2.82e-14,47;UBERON:0002020,4.91e-12,34;UBERON:0002346,6.12e-12,64;UBERON:0003075,6.12e-12,64;UBERON:0007284,6.12e-12,64;UBERON:0001017,9.46e-12,73;UBERON:0010371,1.35e-11,73;UBERON:0001016,3.03e-11,75;UBERON:0003056,6.83e-11,49;UBERON:0003528,3.73e-10,29;UBERON:0002791,3.73e-10,29;UBERON:0001893,3.73e-10,29;UBERON:0004121,6.17e-09,95;UBERON:0000924,6.17e-09,95;UBERON:0006601,6.17e-09,95;UBERON:0000007,5.04e-08,8;UBERON:0003296,5.04e-08,8;UBERON:0010133,5.04e-08,8;UBERON:0002420,3.15e-07,8;UBERON:0007245,3.15e-07,8;UBERON:0010009,3.15e-07,8;UBERON:0010011,3.15e-07,8;UBERON:0000454,3.15e-07,8;UBERON:0010314,5.29e-07,92;UBERON:0004176,5.54e-07,17;UBERON:0009196,5.54e-07,17;UBERON:0009117,5.54e-07,17;UBERON:0000473,7.82e-07,14|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.768436610643109,2.48855069540346,2.70011876663381,3.36519938162211,0.571301968807607,1.32521124570968,0.122490799214954,0.479227355091182,0.919218786610021,3.30347642998166,1.14918604276669,0.768032666281217,1.18697658957174,0.823388792421687,2.08365348222704,0,2.25105044012672,2.29197371665215,1.47314292736834,1.13897344639282,0.931997229126503,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,0,0.742210695324124,1.04091196059682,0,0.230615497256059,0.301445281105245,0.587943535678524,0.125666591329675,0,0,0,0.161766849947409,0,0,0,1.17112318804619,1.8850203613211,0.255457055208591,0,0,0,0.898743836428936,1.37250180845588,1.50785222535437,1.04294592115366,1.02286182932132,0.62336413367868,0.648965052271031,0.81471491080253,0,0,0.420883711772948,0.390361328888111,0.919608417733892,0.720248519221397,0.60281927134286,0.612328492361951,0.896796041993948,0.468508622798644,0.517406741478031,0.431135985865684,0.189106080167819,0.351902248327898,0.657587197282725,0.278047249225598,0.348252166522167,0,0.796137067273973,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0.465067889500816,0.268273401399619,0.233530684734339,0.658239399653922,0.32833492815819,0,0.292399974850665,0.439100230582101,0,0.210289948564127,3.08713837137853,0,0,0.639864751605702,0.696710015581316,0.257734922644187,0,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0,0.58489226135736,0,0.216138049874694,0,0.379335801906163,0.342745537829186,0,1.22190796707189,0.387904974335251,0.771494018793504,1.89709611372772,5.75679577120448,6.12295038581362,4.07210640941942,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0.624075346229121,0.505157755894224,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0.491804836130026,0.504941854408746,0.315508219416257,0.390438744296638,0.861693590931196,0.955875191810208,0.668396022247182,0,0.809621403349789,0.584511715822624,0,0.963963949265421,0.851640511249612,3.38324646967785,0.977321756121456,0.329940245945071,0,0,1.51161778482376,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,1.36175842301515,0.720244376125241,2.32845630808958,2.57204442037911,1.77340233642274,4.1024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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2276 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:7165239..7165242,- | |||
|id=chr19:7165239..7165242,- | |||
|ontology_enrichment_celltype=CL:0000540!3.86e-07!33;CL:0000047!3.86e-07!33;CL:0000031!3.86e-07!33;CL:0000404!3.86e-07!33;CL:0000117!6.06e-07!23;CL:0000337!6.06e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.03e-08,23;CL:0000337,2.03e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.78e-17!102;UBERON:0000924!1.78e-17!102;UBERON:0006601!1.78e-17!102;UBERON:0002346!5.13e-17!71;UBERON:0003075!5.13e-17!71;UBERON:0007284!5.13e-17!71;UBERON:0000033!4.34e-16!63;UBERON:0001017!3.08e-15!73;UBERON:0005743!3.08e-15!73;UBERON:0001049!1.46e-14!52;UBERON:0005068!1.46e-14!52;UBERON:0006241!1.46e-14!52;UBERON:0007135!1.46e-14!52;UBERON:0000073!1.92e-14!75;UBERON:0001016!1.92e-14!75;UBERON:0003056!2.35e-14!49;UBERON:0000955!6.58e-14!50;UBERON:0006238!6.58e-14!50;UBERON:0002616!1.77e-13!49;UBERON:0003080!1.66e-12!40;UBERON:0002780!4.02e-12!39;UBERON:0001890!4.02e-12!39;UBERON:0006240!4.02e-12!39;UBERON:0007811!1.96e-10!86;UBERON:0000153!4.16e-10!94;UBERON:0002020!1.75e-09!34;UBERON:0002791!1.49e-07!29;UBERON:0003528!1.49e-07!29;UBERON:0001893!1.49e-07!29;UBERON:0000991!7.18e-07!18;UBERON:0005564!7.18e-07!18;UBERON:0000468!9.46e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.73e-18,54;UBERON:0001049,2.79e-16,52;UBERON:0005068,2.79e-16,52;UBERON:0006241,2.79e-16,52;UBERON:0007135,2.79e-16,52;UBERON:0002780,4.03e-15,39;UBERON:0001890,4.03e-15,39;UBERON:0006240,4.03e-15,39;UBERON:0002616,1.01e-14,46;UBERON:0003080,1.34e-14,40;UBERON:0000955,2.82e-14,47;UBERON:0006238,2.82e-14,47;UBERON:0002020,4.91e-12,34;UBERON:0002346,6.12e-12,64;UBERON:0003075,6.12e-12,64;UBERON:0007284,6.12e-12,64;UBERON:0001017,9.46e-12,73;UBERON:0010371,1.35e-11,73;UBERON:0001016,3.03e-11,75;UBERON:0003056,6.83e-11,49;UBERON:0003528,3.73e-10,29;UBERON:0002791,3.73e-10,29;UBERON:0001893,3.73e-10,29;UBERON:0004121,6.17e-09,95;UBERON:0000924,6.17e-09,95;UBERON:0006601,6.17e-09,95;UBERON:0000007,5.04e-08,8;UBERON:0003296,5.04e-08,8;UBERON:0010133,5.04e-08,8;UBERON:0002420,3.15e-07,8;UBERON:0007245,3.15e-07,8;UBERON:0010009,3.15e-07,8;UBERON:0010011,3.15e-07,8;UBERON:0000454,3.15e-07,8;UBERON:0010314,5.29e-07,92;UBERON:0004176,5.54e-07,17;UBERON:0009196,5.54e-07,17;UBERON:0009117,5.54e-07,17;UBERON:0000473,7.82e-07,14 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.768436610643109,2.48855069540346,2.70011876663381,3.36519938162211,0.571301968807607,1.32521124570968,0.122490799214954,0.479227355091182,0.919218786610021,3.30347642998166,1.14918604276669,0.768032666281217,1.18697658957174,0.823388792421687,2.08365348222704,0,2.25105044012672,2.29197371665215,1.47314292736834,1.13897344639282,0.931997229126503,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,0,0.742210695324124,1.04091196059682,0,0.230615497256059,0.301445281105245,0.587943535678524,0.125666591329675,0,0,0,0.161766849947409,0,0,0,1.17112318804619,1.8850203613211,0.255457055208591,0,0,0,0.898743836428936,1.37250180845588,1.50785222535437,1.04294592115366,1.02286182932132,0.62336413367868,0.648965052271031,0.81471491080253,0,0,0.420883711772948,0.390361328888111,0.919608417733892,0.720248519221397,0.60281927134286,0.612328492361951,0.896796041993948,0.468508622798644,0.517406741478031,0.431135985865684,0.189106080167819,0.351902248327898,0.657587197282725,0.278047249225598,0.348252166522167,0,0.796137067273973,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0.465067889500816,0.268273401399619,0.233530684734339,0.658239399653922,0.32833492815819,0,0.292399974850665,0.439100230582101,0,0.210289948564127,3.08713837137853,0,0,0.639864751605702,0.696710015581316,0.257734922644187,0,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0,0.58489226135736,0,0.216138049874694,0,0.379335801906163,0.342745537829186,0,1.22190796707189,0.387904974335251,0.771494018793504,1.89709611372772,5.75679577120448,6.12295038581362,4.07210640941942,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0.624075346229121,0.505157755894224,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0.491804836130026,0.504941854408746,0.315508219416257,0.390438744296638,0.861693590931196,0.955875191810208,0.668396022247182,0,0.809621403349789,0.584511715822624,0,0.963963949265421,0.851640511249612,3.38324646967785,0.977321756121456,0.329940245945071,0,0,1.51161778482376,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,1.36175842301515,0.720244376125241,2.32845630808958,2.57204442037911,1.77340233642274,4.10248280484762,2.96188237083818,0.913394847343798,0,0,0,0.32977250588296,0.968786560175433,1.26657142349127,1.3130957840345,0.656563598980245,0.291480836629851,0.927126510052548,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.474503990371703,0.813277868507395,0.432021363287205,0,0.218362563746178,0.674321731924103,0.41326727862668,0.785267825952089,0,0.621339313086926,1.69107881605257,0.598066184175915,0.827292452285488,1.36115831840833,1.54991788173277,1.18269287843545,0.58678619322877,3.3853140059427,2.41176492179135,1.93267296660805,2.30424005006292,0,1.82452693761148,1.23253148597793,0.129920822977795,0.358053391334963,0.198681354781265,0.240390899039938,0.147689527174577,0.403865799792591,0.15241361331,0.201652370273681,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.915758121336325,1.50057865355346,0,0.564751842617067,0,0.572895513439397,1.03111909406213,2.05524755931193,0.755393897389701,2.70009000092722,1.35096360967266,0.453142408984205,0.51776031175182,0.207574695168353,0.798049746802062,0.682934423016537,0,0.419226325255965,0.367687016900028,0,0.412070114477788,0,0.758091635291392,0,0.188626341386076,0.280924522409647,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0,0.824171801606613,0.441596760403192,0,0.70990322463735,0.476872379894642,0.290692833264657,0.0941093804153306,0.676916863133412,0.182927972872773,0,0.543216455383447,0.561142271657738,0.237270036248348,0.197008964751127,0,0,0.385813221962283,1.74867404556562,0.233931608445408,0.644613162144895,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr19:7165239..7165242,- | |||
}} |
Revision as of 18:24, 13 September 2013
Short description: | p@chr19:7165239..7165242, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:7165239..7165242, - |
Coexpression cluster: | MCL_coexpression_mm9:2276 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.03e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.03e-08 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.