FFCP PHASE1:Mm9::chr12:120089712..120089714,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2032|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:120089712..120089714,+|id=chr12:120089712..120089714,+|ontology_enrichment_celltype=CL:0000117!1.67e-13!23;CL:0000337!1.67e-13!23;CL:0002319!1.62e-08!43;CL:0000221!3.75e-08!44;CL:0000133!3.75e-08!44;CL:0000540!1.74e-07!33;CL:0000047!1.74e-07!33;CL:0000031!1.74e-07!33;CL:0000404!1.74e-07!33;CL:0002609!2.00e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,4.73e-18,23;CL:0000337,4.73e-18,23;CL:0002609,9.48e-17,6;CL:0002319,2.16e-13,43;CL:0000221,5.22e-13,44;CL:0000133,5.22e-13,44;CL:0000540,9.10e-12,33;CL:0000047,9.10e-12,33;CL:0000031,9.10e-12,33;CL:0000404,9.10e-12,33;CL:0002608,5.08e-10,3;CL:0000393,1.50e-09,39;CL:0000211,1.50e-09,39;CL:0002613,1.69e-09,3;CL:0002321,4.65e-08,70;CL:0002605,8.07e-07,2;CL:0002604,8.07e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.06e-14!34;UBERON:0001049!1.15e-12!52;UBERON:0005068!1.15e-12!52;UBERON:0006241!1.15e-12!52;UBERON:0007135!1.15e-12!52;UBERON:0002780!8.26e-12!39;UBERON:0001890!8.26e-12!39;UBERON:0006240!8.26e-12!39;UBERON:0003080!2.68e-11!40;UBERON:0003056!7.04e-11!49;UBERON:0002791!1.28e-10!29;UBERON:0003528!1.28e-10!29;UBERON:0001893!1.28e-10!29;UBERON:0001017!1.30e-10!73;UBERON:0005743!1.30e-10!73;UBERON:0000955!2.86e-10!50;UBERON:0006238!2.86e-10!50;UBERON:0000073!5.14e-10!75;UBERON:0001016!5.14e-10!75;UBERON:0002616!1.70e-09!49;UBERON:0002346!4.14e-09!71;UBERON:0003075!4.14e-09!71;UBERON:0007284!4.14e-09!71;UBERON:0000033!6.88e-09!63;UBERON:0001954!2.19e-08!7;UBERON:0003022!2.19e-08!7;UBERON:0002421!2.19e-08!7;UBERON:0000349!2.19e-08!7;UBERON:0002600!2.19e-08!7;UBERON:0004121!6.34e-08!102;UBERON:0000924!6.34e-08!102;UBERON:0006601!6.34e-08!102;UBERON:0000153!8.55e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.23e-18,34;UBERON:0003528,1.85e-16,29;UBERON:0002791,1.85e-16,29;UBERON:0001893,1.85e-16,29;UBERON:0001954,4.89e-15,7;UBERON:0003022,4.89e-15,7;UBERON:0002421,4.89e-15,7;UBERON:0000349,4.89e-15,7;UBERON:0002600,4.89e-15,7;UBERON:0000955,2.93e-12,47;UBERON:0006238,2.93e-12,47;UBERON:0001049,3.67e-12,52;UBERON:0005068,3.67e-12,52;UBERON:0006241,3.67e-12,52;UBERON:0007135,3.67e-12,52;UBERON:0000073,1.41e-11,54;UBERON:0002780,1.78e-11,39;UBERON:0001890,1.78e-11,39;UBERON:0006240,1.78e-11,39;UBERON:0003080,4.07e-11,40;UBERON:0002616,8.93e-11,46;UBERON:0001017,5.32e-10,73;UBERON:0001016,1.26e-09,75;UBERON:0000369,1.32e-09,5;UBERON:0002435,1.32e-09,5;UBERON:0000204,1.32e-09,5;UBERON:0010082,1.32e-09,5;UBERON:0000956,1.42e-09,21;UBERON:0001869,1.42e-09,21;UBERON:0000203,1.42e-09,21;UBERON:0002346,3.35e-09,64;UBERON:0003075,3.35e-09,64;UBERON:0007284,3.35e-09,64;UBERON:0002420,9.67e-09,8;UBERON:0007245,9.67e-09,8;UBERON:0010009,9.67e-09,8;UBERON:0010011,9.67e-09,8;UBERON:0000454,9.67e-09,8;UBERON:0003056,1.54e-08,49;UBERON:0010371,1.26e-07,73;UBERON:0010147,2.39e-07,2;UBERON:0003937,2.39e-07,2;UBERON:0005399,2.39e-07,2;UBERON:0004121,9.31e-07,95;UBERON:0000924,9.31e-07,95;UBERON:0006601,9.31e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,3.07560655828261,2.3331587888914,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,1.03689612308478,1.35005938331691,1.68259969081106,0.856952953211411,0.441737081903227,3.91970557487853,5.75072826109418,9.19218786610021,0,0,0.307213066512487,2.37395317914349,2.47016637726506,3.12548022334056,0,1.12552522006336,0.15279824777681,0.589257170947335,1.70846016958924,1.86399445825301,0,0,0,0,0,0,0,0,0,5.79463096765396,11.4305842025262,6.36011234118612,0,2.56652954828636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0.915001205637253,2.01046963380583,0.173824320192276,0,0.41557608911912,0.324482526135515,0.203678727700633,0.124406970610093,0.252722758433675,0,0.260240885925407,0.229902104433473,0.360124259610698,0,0,0.12811372028485,0,0,1.29340795759705,0.189106080167819,0.527853372491847,0.657587197282725,1.39023624612799,1.74126083261083,1.23469281844766,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0.420579897128254,1.85228302282712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1381379225595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.857348140126369,0.177340233642274,0,0.329098041204242,0,0.23467170806371,0.21183207086382,7.49796553386871,0,0,0.241251699712623,0.238744688006273,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,8.52672576860118,0.564751842617067,0,0,0.343706364687375,0,0,0,0,0,0,2.38710899443606,1.59609949360412,1.02440163452481,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.0936415074698824,0.256100609619477,0.34461281373368,0,0.115884325944855,0,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0.145346416632329,0.470546902076653,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0,0.749431733813838,0.233931608445408,0,0,0,0.231867835620421|short_description=p@chr12:120089712..120089714,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2032 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:120089712..120089714,+ | |||
|id=chr12:120089712..120089714,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.67e-13!23;CL:0000337!1.67e-13!23;CL:0002319!1.62e-08!43;CL:0000221!3.75e-08!44;CL:0000133!3.75e-08!44;CL:0000540!1.74e-07!33;CL:0000047!1.74e-07!33;CL:0000031!1.74e-07!33;CL:0000404!1.74e-07!33;CL:0002609!2.00e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.73e-18,23;CL:0000337,4.73e-18,23;CL:0002609,9.48e-17,6;CL:0002319,2.16e-13,43;CL:0000221,5.22e-13,44;CL:0000133,5.22e-13,44;CL:0000540,9.10e-12,33;CL:0000047,9.10e-12,33;CL:0000031,9.10e-12,33;CL:0000404,9.10e-12,33;CL:0002608,5.08e-10,3;CL:0000393,1.50e-09,39;CL:0000211,1.50e-09,39;CL:0002613,1.69e-09,3;CL:0002321,4.65e-08,70;CL:0002605,8.07e-07,2;CL:0002604,8.07e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.06e-14!34;UBERON:0001049!1.15e-12!52;UBERON:0005068!1.15e-12!52;UBERON:0006241!1.15e-12!52;UBERON:0007135!1.15e-12!52;UBERON:0002780!8.26e-12!39;UBERON:0001890!8.26e-12!39;UBERON:0006240!8.26e-12!39;UBERON:0003080!2.68e-11!40;UBERON:0003056!7.04e-11!49;UBERON:0002791!1.28e-10!29;UBERON:0003528!1.28e-10!29;UBERON:0001893!1.28e-10!29;UBERON:0001017!1.30e-10!73;UBERON:0005743!1.30e-10!73;UBERON:0000955!2.86e-10!50;UBERON:0006238!2.86e-10!50;UBERON:0000073!5.14e-10!75;UBERON:0001016!5.14e-10!75;UBERON:0002616!1.70e-09!49;UBERON:0002346!4.14e-09!71;UBERON:0003075!4.14e-09!71;UBERON:0007284!4.14e-09!71;UBERON:0000033!6.88e-09!63;UBERON:0001954!2.19e-08!7;UBERON:0003022!2.19e-08!7;UBERON:0002421!2.19e-08!7;UBERON:0000349!2.19e-08!7;UBERON:0002600!2.19e-08!7;UBERON:0004121!6.34e-08!102;UBERON:0000924!6.34e-08!102;UBERON:0006601!6.34e-08!102;UBERON:0000153!8.55e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.23e-18,34;UBERON:0003528,1.85e-16,29;UBERON:0002791,1.85e-16,29;UBERON:0001893,1.85e-16,29;UBERON:0001954,4.89e-15,7;UBERON:0003022,4.89e-15,7;UBERON:0002421,4.89e-15,7;UBERON:0000349,4.89e-15,7;UBERON:0002600,4.89e-15,7;UBERON:0000955,2.93e-12,47;UBERON:0006238,2.93e-12,47;UBERON:0001049,3.67e-12,52;UBERON:0005068,3.67e-12,52;UBERON:0006241,3.67e-12,52;UBERON:0007135,3.67e-12,52;UBERON:0000073,1.41e-11,54;UBERON:0002780,1.78e-11,39;UBERON:0001890,1.78e-11,39;UBERON:0006240,1.78e-11,39;UBERON:0003080,4.07e-11,40;UBERON:0002616,8.93e-11,46;UBERON:0001017,5.32e-10,73;UBERON:0001016,1.26e-09,75;UBERON:0000369,1.32e-09,5;UBERON:0002435,1.32e-09,5;UBERON:0000204,1.32e-09,5;UBERON:0010082,1.32e-09,5;UBERON:0000956,1.42e-09,21;UBERON:0001869,1.42e-09,21;UBERON:0000203,1.42e-09,21;UBERON:0002346,3.35e-09,64;UBERON:0003075,3.35e-09,64;UBERON:0007284,3.35e-09,64;UBERON:0002420,9.67e-09,8;UBERON:0007245,9.67e-09,8;UBERON:0010009,9.67e-09,8;UBERON:0010011,9.67e-09,8;UBERON:0000454,9.67e-09,8;UBERON:0003056,1.54e-08,49;UBERON:0010371,1.26e-07,73;UBERON:0010147,2.39e-07,2;UBERON:0003937,2.39e-07,2;UBERON:0005399,2.39e-07,2;UBERON:0004121,9.31e-07,95;UBERON:0000924,9.31e-07,95;UBERON:0006601,9.31e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,3.07560655828261,2.3331587888914,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,1.03689612308478,1.35005938331691,1.68259969081106,0.856952953211411,0.441737081903227,3.91970557487853,5.75072826109418,9.19218786610021,0,0,0.307213066512487,2.37395317914349,2.47016637726506,3.12548022334056,0,1.12552522006336,0.15279824777681,0.589257170947335,1.70846016958924,1.86399445825301,0,0,0,0,0,0,0,0,0,5.79463096765396,11.4305842025262,6.36011234118612,0,2.56652954828636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0.915001205637253,2.01046963380583,0.173824320192276,0,0.41557608911912,0.324482526135515,0.203678727700633,0.124406970610093,0.252722758433675,0,0.260240885925407,0.229902104433473,0.360124259610698,0,0,0.12811372028485,0,0,1.29340795759705,0.189106080167819,0.527853372491847,0.657587197282725,1.39023624612799,1.74126083261083,1.23469281844766,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0.420579897128254,1.85228302282712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1381379225595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.857348140126369,0.177340233642274,0,0.329098041204242,0,0.23467170806371,0.21183207086382,7.49796553386871,0,0,0.241251699712623,0.238744688006273,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,8.52672576860118,0.564751842617067,0,0,0.343706364687375,0,0,0,0,0,0,2.38710899443606,1.59609949360412,1.02440163452481,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.0936415074698824,0.256100609619477,0.34461281373368,0,0.115884325944855,0,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0.145346416632329,0.470546902076653,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0,0.749431733813838,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p@chr12:120089712..120089714,+ | |||
}} |
Revision as of 22:31, 12 September 2013
Short description: | p@chr12:120089712..120089714, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:120089712..120089714, + |
Coexpression cluster: | MCL_coexpression_mm9:2032 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.73e-18 | 23 |
neuroblast (sensu Vertebrata) | 4.73e-18 | 23 |
neuron of cerebral cortex | 9.48e-17 | 6 |
neural cell | 2.16e-13 | 43 |
ectodermal cell | 5.22e-13 | 44 |
neurectodermal cell | 5.22e-13 | 44 |
neuron | 9.10e-12 | 33 |
neuronal stem cell | 9.10e-12 | 33 |
neuroblast | 9.10e-12 | 33 |
electrically signaling cell | 9.10e-12 | 33 |
hippocampal neuron | 5.08e-10 | 3 |
electrically responsive cell | 1.50e-09 | 39 |
electrically active cell | 1.50e-09 | 39 |
striatum neuron | 1.69e-09 | 3 |
embryonic cell | 4.65e-08 | 70 |
astrocyte of the cerebral cortex | 8.07e-07 | 2 |
astrocyte of the hippocampus | 8.07e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.