FFCP PHASE1:Mm9::chr10:43439438..43439440,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=15|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:43439438..43439440,+|id=chr10:43439438..43439440,+|ontology_enrichment_celltype=CL:0000553!6.36e-11!6;CL:0000556!6.36e-11!6;CL:0000050!6.44e-07!9|ontology_enrichment_celltype_v019_2=CL:0002027,4.66e-27,3;CL:0002006,4.66e-27,3;CL:0002024,4.66e-27,3;CL:0000553,6.75e-14,6;CL:0000556,6.75e-14,6;CL:0000050,1.79e-09,9;CL:0000839,9.95e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!3.88e-11!49;UBERON:0005173!3.88e-11!49;UBERON:0002417!3.88e-11!49;UBERON:0000916!3.88e-11!49;UBERON:0002405!7.91e-09!70;UBERON:0003887!2.56e-08!10;UBERON:0002106!1.15e-07!6;UBERON:0004457!1.15e-07!6;UBERON:0000042!1.15e-07!6;UBERON:0004854!1.15e-07!6;UBERON:0009034!1.15e-07!6;UBERON:0002095!1.15e-07!6;UBERON:0004782!1.15e-07!6;UBERON:0003281!1.15e-07!6;UBERON:0009664!1.15e-07!6;UBERON:0002296!1.15e-07!6;UBERON:0005602!1.15e-07!6;UBERON:0001179!1.15e-07!6;UBERON:0006293!1.15e-07!6;UBERON:0009569!1.53e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0003887,9.68e-15,10;UBERON:0002106,4.07e-14,6;UBERON:0004457,4.07e-14,6;UBERON:0000042,4.07e-14,6;UBERON:0004854,4.07e-14,6;UBERON:0009034,4.07e-14,6;UBERON:0002095,4.07e-14,6;UBERON:0004782,4.07e-14,6;UBERON:0003281,4.07e-14,6;UBERON:0009664,4.07e-14,6;UBERON:0002296,4.07e-14,6;UBERON:0005602,4.07e-14,6;UBERON:0001179,4.07e-14,6;UBERON:0006293,4.07e-14,6;UBERON:0000998,2.48e-10,1;UBERON:0007194,2.48e-10,1;UBERON:0006868,2.48e-10,1;UBERON:0005172,1.65e-08,49;UBERON:0005173,1.65e-08,49;UBERON:0002417,1.65e-08,49;UBERON:0000916,1.65e-08,49;UBERON:0002390,5.22e-07,45;UBERON:0003061,5.22e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,1.61980213911861,2.79824751251259,0.946386496074713,0.411343300817216,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.246794327843601,0,0.333690211432188,0.589676985339609,0.224862112384854,0.608580364165509,0.72353147925725,0.763877555344259,1.43848068725405,1.29708181420028,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0,0,0.341741761595705,0,0.370389054739423,2.44878994106098,2.32380187125743,3.43167259809784,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0.375364950902364,0,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0,0,0,0,0|short_description=p@chr10:43439438..43439440,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:43439438..43439440,+ | |||
|id=chr10:43439438..43439440,+ | |||
|ontology_enrichment_celltype=CL:0000553!6.36e-11!6;CL:0000556!6.36e-11!6;CL:0000050!6.44e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,4.66e-27,3;CL:0002006,4.66e-27,3;CL:0002024,4.66e-27,3;CL:0000553,6.75e-14,6;CL:0000556,6.75e-14,6;CL:0000050,1.79e-09,9;CL:0000839,9.95e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.88e-11!49;UBERON:0005173!3.88e-11!49;UBERON:0002417!3.88e-11!49;UBERON:0000916!3.88e-11!49;UBERON:0002405!7.91e-09!70;UBERON:0003887!2.56e-08!10;UBERON:0002106!1.15e-07!6;UBERON:0004457!1.15e-07!6;UBERON:0000042!1.15e-07!6;UBERON:0004854!1.15e-07!6;UBERON:0009034!1.15e-07!6;UBERON:0002095!1.15e-07!6;UBERON:0004782!1.15e-07!6;UBERON:0003281!1.15e-07!6;UBERON:0009664!1.15e-07!6;UBERON:0002296!1.15e-07!6;UBERON:0005602!1.15e-07!6;UBERON:0001179!1.15e-07!6;UBERON:0006293!1.15e-07!6;UBERON:0009569!1.53e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003887,9.68e-15,10;UBERON:0002106,4.07e-14,6;UBERON:0004457,4.07e-14,6;UBERON:0000042,4.07e-14,6;UBERON:0004854,4.07e-14,6;UBERON:0009034,4.07e-14,6;UBERON:0002095,4.07e-14,6;UBERON:0004782,4.07e-14,6;UBERON:0003281,4.07e-14,6;UBERON:0009664,4.07e-14,6;UBERON:0002296,4.07e-14,6;UBERON:0005602,4.07e-14,6;UBERON:0001179,4.07e-14,6;UBERON:0006293,4.07e-14,6;UBERON:0000998,2.48e-10,1;UBERON:0007194,2.48e-10,1;UBERON:0006868,2.48e-10,1;UBERON:0005172,1.65e-08,49;UBERON:0005173,1.65e-08,49;UBERON:0002417,1.65e-08,49;UBERON:0000916,1.65e-08,49;UBERON:0002390,5.22e-07,45;UBERON:0003061,5.22e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,1.61980213911861,2.79824751251259,0.946386496074713,0.411343300817216,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.246794327843601,0,0.333690211432188,0.589676985339609,0.224862112384854,0.608580364165509,0.72353147925725,0.763877555344259,1.43848068725405,1.29708181420028,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0,0,0.341741761595705,0,0.370389054739423,2.44878994106098,2.32380187125743,3.43167259809784,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0.375364950902364,0,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:43439438..43439440,+ | |||
}} |
Revision as of 16:46, 12 September 2013
Short description: | p@chr10:43439438..43439440, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:43439438..43439440, + |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 4.66e-27 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 4.66e-27 | 3 |
Kit-positive megakaryocyte progenitor cell | 4.66e-27 | 3 |
megakaryocyte progenitor cell | 6.75e-14 | 6 |
megakaryocyte | 6.75e-14 | 6 |
megakaryocyte-erythroid progenitor cell | 1.79e-09 | 9 |
myeloid lineage restricted progenitor cell | 9.95e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
intraembryonic coelom | 9.68e-15 | 10 |
spleen | 4.07e-14 | 6 |
cavity lining | 4.07e-14 | 6 |
serous membrane | 4.07e-14 | 6 |
gastrointestinal system mesentery | 4.07e-14 | 6 |
stomach region | 4.07e-14 | 6 |
mesentery | 4.07e-14 | 6 |
gastrointestinal system serosa | 4.07e-14 | 6 |
mesentery of stomach | 4.07e-14 | 6 |
gut mesentery | 4.07e-14 | 6 |
dorsal mesentery | 4.07e-14 | 6 |
dorsal mesogastrium | 4.07e-14 | 6 |
peritoneal cavity | 4.07e-14 | 6 |
spleen primordium | 4.07e-14 | 6 |
seminal vesicle | 2.48e-10 | 1 |
vesicular gland | 2.48e-10 | 1 |
seminal fluid secreting gland | 2.48e-10 | 1 |
abdomen element | 1.65e-08 | 49 |
abdominal segment element | 1.65e-08 | 49 |
abdominal segment of trunk | 1.65e-08 | 49 |
abdomen | 1.65e-08 | 49 |
hematopoietic system | 5.22e-07 | 45 |
blood island | 5.22e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.