FFCP PHASE1:Mm9::chr14:13655378..13655389,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=27062|HGNC=|MCL_coexpression_id=20|UniProt=E9QNG4,Q80TJ1,E9QN91|association_with_transcript=203bp_to_ENSMUST00000067491,ENSMUST00000112657,ENSMUST00000112658,NM_001042617,NM_012061,uc007sfu.1,uc007sfv.1_5end|description=CAGE_peak_6_at_Cadps_5end|id=chr14:13655378..13655389,-|ontology_enrichment_celltype=CL:0000117!1.35e-10!23;CL:0000337!1.35e-10!23;CL:0000540!2.28e-08!33;CL:0000047!2.28e-08!33;CL:0000031!2.28e-08!33;CL:0000404!2.28e-08!33;CL:0002319!8.31e-07!43|ontology_enrichment_celltype_v019_2=CL:0002614,1.50e-10,3;CL:0002610,3.56e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.00e-30!71;UBERON:0003075!2.00e-30!71;UBERON:0007284!2.00e-30!71;UBERON:0000073!4.51e-26!75;UBERON:0001016!4.51e-26!75;UBERON:0001049!1.05e-25!52;UBERON:0005068!1.05e-25!52;UBERON:0006241!1.05e-25!52;UBERON:0007135!1.05e-25!52;UBERON:0004121!3.11e-25!102;UBERON:0000924!3.11e-25!102;UBERON:0006601!3.11e-25!102;UBERON:0001017!3.41e-25!73;UBERON:0005743!3.41e-25!73;UBERON:0000033!3.43e-25!63;UBERON:0000955!2.01e-24!50;UBERON:0006238!2.01e-24!50;UBERON:0002616!1.77e-23!49;UBERON:0003056!1.78e-21!49;UBERON:0002020!8.79e-20!34;UBERON:0003080!4.31e-18!40;UBERON:0002780!4.31e-17!39;UBERON:0001890!4.31e-17!39;UBERON:0006240!4.31e-17!39;UBERON:0002791!9.79e-16!29;UBERON:0003528!9.79e-16!29;UBERON:0001893!9.79e-16!29;UBERON:0007811!6.70e-15!86;UBERON:0000153!4.81e-13!94;UBERON:0002619!2.27e-11!17;UBERON:0002021!9.44e-11!10;UBERON:0000411!9.44e-11!10;UBERON:0001950!9.44e-11!10;UBERON:0000956!8.44e-10!21;UBERON:0001869!8.44e-10!21;UBERON:0000203!8.44e-10!21;UBERON:0003076!3.20e-08!12;UBERON:0003057!3.20e-08!12;UBERON:0002298!4.69e-08!6;UBERON:0002420!1.65e-07!8;UBERON:0007245!1.65e-07!8;UBERON:0010009!1.65e-07!8;UBERON:0010011!1.65e-07!8;UBERON:0000454!1.65e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.43e-29,54;UBERON:0000955,1.35e-25,47;UBERON:0006238,1.35e-25,47;UBERON:0001049,2.89e-25,52;UBERON:0005068,2.89e-25,52;UBERON:0006241,2.89e-25,52;UBERON:0007135,2.89e-25,52;UBERON:0001017,1.10e-24,73;UBERON:0001016,6.73e-24,75;UBERON:0002616,1.16e-23,46;UBERON:0002021,6.11e-23,10;UBERON:0000411,6.11e-23,10;UBERON:0001950,6.11e-23,10;UBERON:0002346,9.49e-22,64;UBERON:0003075,9.49e-22,64;UBERON:0007284,9.49e-22,64;UBERON:0004121,1.63e-19,95;UBERON:0000924,1.63e-19,95;UBERON:0006601,1.63e-19,95;UBERON:0003080,3.24e-19,40;UBERON:0010371,1.66e-18,73;UBERON:0003528,5.97e-18,29;UBERON:0002791,5.97e-18,29;UBERON:0001893,5.97e-18,29;UBERON:0002780,3.12e-17,39;UBERON:0001890,3.12e-17,39;UBERON:0006240,3.12e-17,39;UBERON:0002020,3.38e-17,34;UBERON:0003056,4.99e-17,49;UBERON:0002619,7.47e-16,17;UBERON:0000956,2.66e-15,21;UBERON:0001869,2.66e-15,21;UBERON:0000203,2.66e-15,21;UBERON:0010314,9.78e-14,92;UBERON:0002950,1.27e-13,4;UBERON:0001891,1.27e-13,4;UBERON:0009616,1.27e-13,4;UBERON:0010286,1.27e-13,4;UBERON:0002038,1.50e-10,3;UBERON:0009663,1.50e-10,3;UBERON:0009661,1.50e-10,3;UBERON:0000125,1.50e-10,3;UBERON:0002308,1.50e-10,3;UBERON:0004684,3.56e-10,3;UBERON:0002275,3.56e-10,3;UBERON:0000025,4.22e-09,114;UBERON:0004111,3.28e-08,122;UBERON:0001896,4.37e-08,2;UBERON:0002298,4.37e-08,2;UBERON:0005290,4.37e-08,2;UBERON:0010096,4.37e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.441737081903227,0.367472397644862,0.0958454710182364,0,1.10115880999389,2.80912143787413,2.61131106535614,0.263772575460388,0.0914876436024097,0.52091337055676,3.07101298901519,1.68828783009504,2.44477196442896,0.589257170947335,1.13897344639282,0.931997229126503,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0,0.452167921657868,0,0.251333182659351,0,0,0,0,0,0,0,1.46390398505774,0.83778682725382,0.255457055208591,0,0,0,2.99581278809645,0.457500602818626,0.628271760564322,1.56441888173049,1.53429274398198,4.57133698031032,3.40706652442291,0.101839363850316,0,0,0.210441855886474,0.390361328888111,0.229902104433473,0,0,0.476255494059295,0.512454881139399,0.374806898238915,1.29351685369508,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.617427674275707,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65596710964597,6.21221938938677,0,0,0,0.390438744296638,0.430846795465598,0,0,0,0,0.292255857911312,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0.661585194164886,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.129159823477731,0,0.11735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| ||
|EntrezGene=27062 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=E9QNG4,Q80TJ1,E9QN91 | |||
|association_with_transcript=203bp_to_ENSMUST00000067491,ENSMUST00000112657,ENSMUST00000112658,NM_001042617,NM_012061,uc007sfu.1,uc007sfv.1_5end | |||
|description=CAGE_peak_6_at_Cadps_5end | |||
|id=chr14:13655378..13655389,- | |||
|ontology_enrichment_celltype=CL:0000117!1.35e-10!23;CL:0000337!1.35e-10!23;CL:0000540!2.28e-08!33;CL:0000047!2.28e-08!33;CL:0000031!2.28e-08!33;CL:0000404!2.28e-08!33;CL:0002319!8.31e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.50e-10,3;CL:0002610,3.56e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.00e-30!71;UBERON:0003075!2.00e-30!71;UBERON:0007284!2.00e-30!71;UBERON:0000073!4.51e-26!75;UBERON:0001016!4.51e-26!75;UBERON:0001049!1.05e-25!52;UBERON:0005068!1.05e-25!52;UBERON:0006241!1.05e-25!52;UBERON:0007135!1.05e-25!52;UBERON:0004121!3.11e-25!102;UBERON:0000924!3.11e-25!102;UBERON:0006601!3.11e-25!102;UBERON:0001017!3.41e-25!73;UBERON:0005743!3.41e-25!73;UBERON:0000033!3.43e-25!63;UBERON:0000955!2.01e-24!50;UBERON:0006238!2.01e-24!50;UBERON:0002616!1.77e-23!49;UBERON:0003056!1.78e-21!49;UBERON:0002020!8.79e-20!34;UBERON:0003080!4.31e-18!40;UBERON:0002780!4.31e-17!39;UBERON:0001890!4.31e-17!39;UBERON:0006240!4.31e-17!39;UBERON:0002791!9.79e-16!29;UBERON:0003528!9.79e-16!29;UBERON:0001893!9.79e-16!29;UBERON:0007811!6.70e-15!86;UBERON:0000153!4.81e-13!94;UBERON:0002619!2.27e-11!17;UBERON:0002021!9.44e-11!10;UBERON:0000411!9.44e-11!10;UBERON:0001950!9.44e-11!10;UBERON:0000956!8.44e-10!21;UBERON:0001869!8.44e-10!21;UBERON:0000203!8.44e-10!21;UBERON:0003076!3.20e-08!12;UBERON:0003057!3.20e-08!12;UBERON:0002298!4.69e-08!6;UBERON:0002420!1.65e-07!8;UBERON:0007245!1.65e-07!8;UBERON:0010009!1.65e-07!8;UBERON:0010011!1.65e-07!8;UBERON:0000454!1.65e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.43e-29,54;UBERON:0000955,1.35e-25,47;UBERON:0006238,1.35e-25,47;UBERON:0001049,2.89e-25,52;UBERON:0005068,2.89e-25,52;UBERON:0006241,2.89e-25,52;UBERON:0007135,2.89e-25,52;UBERON:0001017,1.10e-24,73;UBERON:0001016,6.73e-24,75;UBERON:0002616,1.16e-23,46;UBERON:0002021,6.11e-23,10;UBERON:0000411,6.11e-23,10;UBERON:0001950,6.11e-23,10;UBERON:0002346,9.49e-22,64;UBERON:0003075,9.49e-22,64;UBERON:0007284,9.49e-22,64;UBERON:0004121,1.63e-19,95;UBERON:0000924,1.63e-19,95;UBERON:0006601,1.63e-19,95;UBERON:0003080,3.24e-19,40;UBERON:0010371,1.66e-18,73;UBERON:0003528,5.97e-18,29;UBERON:0002791,5.97e-18,29;UBERON:0001893,5.97e-18,29;UBERON:0002780,3.12e-17,39;UBERON:0001890,3.12e-17,39;UBERON:0006240,3.12e-17,39;UBERON:0002020,3.38e-17,34;UBERON:0003056,4.99e-17,49;UBERON:0002619,7.47e-16,17;UBERON:0000956,2.66e-15,21;UBERON:0001869,2.66e-15,21;UBERON:0000203,2.66e-15,21;UBERON:0010314,9.78e-14,92;UBERON:0002950,1.27e-13,4;UBERON:0001891,1.27e-13,4;UBERON:0009616,1.27e-13,4;UBERON:0010286,1.27e-13,4;UBERON:0002038,1.50e-10,3;UBERON:0009663,1.50e-10,3;UBERON:0009661,1.50e-10,3;UBERON:0000125,1.50e-10,3;UBERON:0002308,1.50e-10,3;UBERON:0004684,3.56e-10,3;UBERON:0002275,3.56e-10,3;UBERON:0000025,4.22e-09,114;UBERON:0004111,3.28e-08,122;UBERON:0001896,4.37e-08,2;UBERON:0002298,4.37e-08,2;UBERON:0005290,4.37e-08,2;UBERON:0010096,4.37e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.441737081903227,0.367472397644862,0.0958454710182364,0,1.10115880999389,2.80912143787413,2.61131106535614,0.263772575460388,0.0914876436024097,0.52091337055676,3.07101298901519,1.68828783009504,2.44477196442896,0.589257170947335,1.13897344639282,0.931997229126503,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0,0.452167921657868,0,0.251333182659351,0,0,0,0,0,0,0,1.46390398505774,0.83778682725382,0.255457055208591,0,0,0,2.99581278809645,0.457500602818626,0.628271760564322,1.56441888173049,1.53429274398198,4.57133698031032,3.40706652442291,0.101839363850316,0,0,0.210441855886474,0.390361328888111,0.229902104433473,0,0,0.476255494059295,0.512454881139399,0.374806898238915,1.29351685369508,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.617427674275707,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65596710964597,6.21221938938677,0,0,0,0.390438744296638,0.430846795465598,0,0,0,0,0.292255857911312,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0.661585194164886,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.129159823477731,0,0.117357238645754,0,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,1.14579102687879,1.03111909406213,1.37016503954128,2.2661816921691,2.02506750069542,1.35096360967266,1.35942722695261,1.03552062350364,0,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0.412085900803307,0,1.02860775715625,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0.464810523557898,0,0.499621155875892,0,0,0.191288332068843,0,0 | |||
|short_description=p6@Cadps | |||
}} |
Revision as of 01:40, 13 September 2013
Short description: | p6@Cadps |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Cadps_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 203bp_to_ENSMUST00000067491, ENSMUST00000112657, ENSMUST00000112658, NM_001042617, NM_012061, uc007sfu.1, uc007sfv.1_5end |
EntrezGene: | Cadps |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.50e-10 | 3 |
raphe nuclei neuron | 3.56e-10 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.