FFCP PHASE1:Mm9::chr14:118635860..118635885,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=223227|HGNC=|MCL_coexpression_id=2092|UniProt=Q811W0|association_with_transcript=-207bp_to_ENSMUST00000082178_5end|description=CAGE_peak_3_at_Sox21_5end|id=chr14:118635860..118635885,-|ontology_enrichment_celltype=CL:0000117!6.21e-11!23;CL:0000337!6.21e-11!23;CL:0000221!1.44e-10!44;CL:0000133!1.44e-10!44;CL:0002319!6.12e-10!43;CL:0000055!1.63e-08!50;CL:0000540!4.89e-07!33;CL:0000047!4.89e-07!33;CL:0000031!4.89e-07!33;CL:0000404!4.89e-07!33|ontology_enrichment_celltype_v019_2=CL:0000221,8.71e-18,44;CL:0000133,8.71e-18,44;CL:0002319,1.44e-16,43;CL:0000117,3.57e-15,23;CL:0000337,3.57e-15,23;CL:0002321,6.89e-12,70;CL:0000540,1.87e-10,33;CL:0000047,1.87e-10,33;CL:0000031,1.87e-10,33;CL:0000404,1.87e-10,33;CL:0002453,6.16e-10,8;CL:0002609,6.86e-09,6;CL:0000393,3.86e-08,39;CL:0000211,3.86e-08,39;CL:0000333,1.16e-07,10;CL:0000095,1.16e-07,10;CL:0000243,1.16e-07,10;CL:0000123,1.16e-07,10;CL:0000125,1.16e-07,10;CL:0000030,1.16e-07,10;CL:0000339,1.16e-07,10;CL:0000128,5.50e-07,6;CL:0000126,5.50e-07,6;CL:0000127,5.50e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.28e-19!73;UBERON:0005743!6.28e-19!73;UBERON:0000073!2.92e-18!75;UBERON:0001016!2.92e-18!75;UBERON:0001049!1.80e-17!52;UBERON:0005068!1.80e-17!52;UBERON:0006241!1.80e-17!52;UBERON:0007135!1.80e-17!52;UBERON:0004121!2.71e-15!102;UBERON:0000924!2.71e-15!102;UBERON:0006601!2.71e-15!102;UBERON:0002020!9.37e-15!34;UBERON:0000955!2.14e-14!50;UBERON:0006238!2.14e-14!50;UBERON:0002616!2.75e-14!49;UBERON:0000033!1.91e-12!63;UBERON:0003080!2.36e-12!40;UBERON:0002780!5.76e-12!39;UBERON:0001890!5.76e-12!39;UBERON:0006240!5.76e-12!39;UBERON:0002791!8.21e-12!29;UBERON:0003528!8.21e-12!29;UBERON:0001893!8.21e-12!29;UBERON:0002346!2.93e-10!71;UBERON:0003075!2.93e-10!71;UBERON:0007284!2.93e-10!71;UBERON:0000956!9.77e-10!21;UBERON:0001869!9.77e-10!21;UBERON:0000203!9.77e-10!21;UBERON:0003056!3.49e-09!49;UBERON:0002619!8.01e-08!17;UBERON:0007811!5.84e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.39e-16,95;UBERON:0000924,1.39e-16,95;UBERON:0006601,1.39e-16,95;UBERON:0001017,3.66e-16,73;UBERON:0001016,1.76e-15,75;UBERON:0002020,4.36e-15,34;UBERON:0010371,2.66e-13,73;UBERON:0001049,3.44e-13,52;UBERON:0005068,3.44e-13,52;UBERON:0006241,3.44e-13,52;UBERON:0007135,3.44e-13,52;UBERON:0000073,1.94e-12,54;UBERON:0003528,3.00e-10,29;UBERON:0002791,3.00e-10,29;UBERON:0001893,3.00e-10,29;UBERON:0001954,4.10e-10,7;UBERON:0003022,4.10e-10,7;UBERON:0002421,4.10e-10,7;UBERON:0000349,4.10e-10,7;UBERON:0002600,4.10e-10,7;UBERON:0002616,1.96e-09,46;UBERON:0002346,2.03e-09,64;UBERON:0003075,2.03e-09,64;UBERON:0007284,2.03e-09,64;UBERON:0000955,4.06e-09,47;UBERON:0006238,4.06e-09,47;UBERON:0000956,7.42e-09,21;UBERON:0001869,7.42e-09,21;UBERON:0000203,7.42e-09,21;UBERON:0002780,1.89e-08,39;UBERON:0001890,1.89e-08,39;UBERON:0006240,1.89e-08,39;UBERON:0003080,4.00e-08,40;UBERON:0011216,1.31e-07,194;UBERON:0001948,2.71e-07,5;UBERON:0002315,2.71e-07,5|phase1_expression=1.76163731815273,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0.430942465371778,0,0,0.665191531965914,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0.183546752161682,0,8.28495594245697,3.07560655828261,3.4997381833371,2.93971485413261,4.31257693094915,0,0,0,0,0,0,3.84401275633236,5.28990979272033,3.1691570175309,0,0,0,0,0,4.19440154725767,7.30014780110954,2.38486108309499,1.21505344498522,3.15487442027073,2.85650984403804,1.98781686856452,2.9397791811589,3.25874601462004,4.5960939330501,0,0.766124028511126,0.921639199537461,1.31886287730194,1.64677758484337,3.12548022334056,0.558365998002762,0,0.916789486660861,2.35702868378934,2.13557521198654,2.79599168737951,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,5.35204995151386,0,0,0,6.49473123033642,6.84071636782766,11.1215377903252,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0.878342391034642,1.46612694769419,0.255457055208591,0.11981512450592,0,0.127070227073065,0.898743836428936,0.457500602818626,1.88481528169297,0.695297280769106,2.30143911597297,1.24672826735736,0.324482526135515,0.101839363850316,0,0,0.631325567659422,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0.348252166522167,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,1.74937841044784,0,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.509235257325564,0.234690248288502,0,0.238043640886014,0.585400943573396,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,0.963303539926752,1.28932855251423,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0.425820255624806,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.900305470156551,1.55230420539305,0.214337035031592,0.532020700926821,0.178368817602071,0,0.304464949114599,0,0,0,5.11147384118588,3.71368181400583,1.68876189798836,1.55184047204077,0.820704498725306,0,0.741701208042039,0,0,0,0,0,0,0,0,0,6.68269432610579,0.790839983952838,2.64315307264903,3.02414954301044,5.43629569637619,6.33251434863915,3.10187996685088,4.46328660916814,6.02038666563268,0,0,0,0,0,0,0,0,0.352071715937262,0,0,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,3.17422537061296,1.99787358036658,4.66512054369274,2.18250001273302,0,0,0,1.50057865355346,0,0,0.920650473014354,0.572895513439397,0.859265911718438,2.05524755931193,1.5107877947794,0.675022500231806,0.900642406448441,0.453142408984205,1.03552062350364,0.830298780673413,0.798049746802062,0.853668028770671,0.729320151204882,0.419226325255965,0.735374033800057,0.666740183404846,0.618105171716683,0.320919209591815,1.51618327058278,0.50695859978048,0,0.0936415074698824,0.320125762024346,0.574354689556133,0.476293691283074,0.463537303779422,0.38581844092741,0.824171801606613,0.441596760403192,0.685738504770831,0.887379030796687,1.1921809497366,0.436039249896986,0.282328141245992,0.338458431566706,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.394017929502254,0.409231043169689,0.309873682371932,0.771626443924566,1.24905288968973,0.935726433781634,0.429742108096597,0.765153328275374,1.32354851471709,0.231867835620421|short_description=p3@Sox21}} | ||
|EntrezGene=223227 | |||
|HGNC= | |||
|MCL_coexpression_id=2092 | |||
|UniProt=Q811W0 | |||
|association_with_transcript=-207bp_to_ENSMUST00000082178_5end | |||
|description=CAGE_peak_3_at_Sox21_5end | |||
|id=chr14:118635860..118635885,- | |||
|ontology_enrichment_celltype=CL:0000117!6.21e-11!23;CL:0000337!6.21e-11!23;CL:0000221!1.44e-10!44;CL:0000133!1.44e-10!44;CL:0002319!6.12e-10!43;CL:0000055!1.63e-08!50;CL:0000540!4.89e-07!33;CL:0000047!4.89e-07!33;CL:0000031!4.89e-07!33;CL:0000404!4.89e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,8.71e-18,44;CL:0000133,8.71e-18,44;CL:0002319,1.44e-16,43;CL:0000117,3.57e-15,23;CL:0000337,3.57e-15,23;CL:0002321,6.89e-12,70;CL:0000540,1.87e-10,33;CL:0000047,1.87e-10,33;CL:0000031,1.87e-10,33;CL:0000404,1.87e-10,33;CL:0002453,6.16e-10,8;CL:0002609,6.86e-09,6;CL:0000393,3.86e-08,39;CL:0000211,3.86e-08,39;CL:0000333,1.16e-07,10;CL:0000095,1.16e-07,10;CL:0000243,1.16e-07,10;CL:0000123,1.16e-07,10;CL:0000125,1.16e-07,10;CL:0000030,1.16e-07,10;CL:0000339,1.16e-07,10;CL:0000128,5.50e-07,6;CL:0000126,5.50e-07,6;CL:0000127,5.50e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.28e-19!73;UBERON:0005743!6.28e-19!73;UBERON:0000073!2.92e-18!75;UBERON:0001016!2.92e-18!75;UBERON:0001049!1.80e-17!52;UBERON:0005068!1.80e-17!52;UBERON:0006241!1.80e-17!52;UBERON:0007135!1.80e-17!52;UBERON:0004121!2.71e-15!102;UBERON:0000924!2.71e-15!102;UBERON:0006601!2.71e-15!102;UBERON:0002020!9.37e-15!34;UBERON:0000955!2.14e-14!50;UBERON:0006238!2.14e-14!50;UBERON:0002616!2.75e-14!49;UBERON:0000033!1.91e-12!63;UBERON:0003080!2.36e-12!40;UBERON:0002780!5.76e-12!39;UBERON:0001890!5.76e-12!39;UBERON:0006240!5.76e-12!39;UBERON:0002791!8.21e-12!29;UBERON:0003528!8.21e-12!29;UBERON:0001893!8.21e-12!29;UBERON:0002346!2.93e-10!71;UBERON:0003075!2.93e-10!71;UBERON:0007284!2.93e-10!71;UBERON:0000956!9.77e-10!21;UBERON:0001869!9.77e-10!21;UBERON:0000203!9.77e-10!21;UBERON:0003056!3.49e-09!49;UBERON:0002619!8.01e-08!17;UBERON:0007811!5.84e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.39e-16,95;UBERON:0000924,1.39e-16,95;UBERON:0006601,1.39e-16,95;UBERON:0001017,3.66e-16,73;UBERON:0001016,1.76e-15,75;UBERON:0002020,4.36e-15,34;UBERON:0010371,2.66e-13,73;UBERON:0001049,3.44e-13,52;UBERON:0005068,3.44e-13,52;UBERON:0006241,3.44e-13,52;UBERON:0007135,3.44e-13,52;UBERON:0000073,1.94e-12,54;UBERON:0003528,3.00e-10,29;UBERON:0002791,3.00e-10,29;UBERON:0001893,3.00e-10,29;UBERON:0001954,4.10e-10,7;UBERON:0003022,4.10e-10,7;UBERON:0002421,4.10e-10,7;UBERON:0000349,4.10e-10,7;UBERON:0002600,4.10e-10,7;UBERON:0002616,1.96e-09,46;UBERON:0002346,2.03e-09,64;UBERON:0003075,2.03e-09,64;UBERON:0007284,2.03e-09,64;UBERON:0000955,4.06e-09,47;UBERON:0006238,4.06e-09,47;UBERON:0000956,7.42e-09,21;UBERON:0001869,7.42e-09,21;UBERON:0000203,7.42e-09,21;UBERON:0002780,1.89e-08,39;UBERON:0001890,1.89e-08,39;UBERON:0006240,1.89e-08,39;UBERON:0003080,4.00e-08,40;UBERON:0011216,1.31e-07,194;UBERON:0001948,2.71e-07,5;UBERON:0002315,2.71e-07,5 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0.430942465371778,0,0,0.665191531965914,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0.183546752161682,0,8.28495594245697,3.07560655828261,3.4997381833371,2.93971485413261,4.31257693094915,0,0,0,0,0,0,3.84401275633236,5.28990979272033,3.1691570175309,0,0,0,0,0,4.19440154725767,7.30014780110954,2.38486108309499,1.21505344498522,3.15487442027073,2.85650984403804,1.98781686856452,2.9397791811589,3.25874601462004,4.5960939330501,0,0.766124028511126,0.921639199537461,1.31886287730194,1.64677758484337,3.12548022334056,0.558365998002762,0,0.916789486660861,2.35702868378934,2.13557521198654,2.79599168737951,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,5.35204995151386,0,0,0,6.49473123033642,6.84071636782766,11.1215377903252,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0.878342391034642,1.46612694769419,0.255457055208591,0.11981512450592,0,0.127070227073065,0.898743836428936,0.457500602818626,1.88481528169297,0.695297280769106,2.30143911597297,1.24672826735736,0.324482526135515,0.101839363850316,0,0,0.631325567659422,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0.348252166522167,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,1.74937841044784,0,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.509235257325564,0.234690248288502,0,0.238043640886014,0.585400943573396,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,0.963303539926752,1.28932855251423,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0.425820255624806,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.900305470156551,1.55230420539305,0.214337035031592,0.532020700926821,0.178368817602071,0,0.304464949114599,0,0,0,5.11147384118588,3.71368181400583,1.68876189798836,1.55184047204077,0.820704498725306,0,0.741701208042039,0,0,0,0,0,0,0,0,0,6.68269432610579,0.790839983952838,2.64315307264903,3.02414954301044,5.43629569637619,6.33251434863915,3.10187996685088,4.46328660916814,6.02038666563268,0,0,0,0,0,0,0,0,0.352071715937262,0,0,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,3.17422537061296,1.99787358036658,4.66512054369274,2.18250001273302,0,0,0,1.50057865355346,0,0,0.920650473014354,0.572895513439397,0.859265911718438,2.05524755931193,1.5107877947794,0.675022500231806,0.900642406448441,0.453142408984205,1.03552062350364,0.830298780673413,0.798049746802062,0.853668028770671,0.729320151204882,0.419226325255965,0.735374033800057,0.666740183404846,0.618105171716683,0.320919209591815,1.51618327058278,0.50695859978048,0,0.0936415074698824,0.320125762024346,0.574354689556133,0.476293691283074,0.463537303779422,0.38581844092741,0.824171801606613,0.441596760403192,0.685738504770831,0.887379030796687,1.1921809497366,0.436039249896986,0.282328141245992,0.338458431566706,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.394017929502254,0.409231043169689,0.309873682371932,0.771626443924566,1.24905288968973,0.935726433781634,0.429742108096597,0.765153328275374,1.32354851471709,0.231867835620421 | |||
|short_description=p3@Sox21 | |||
}} |
Revision as of 01:31, 13 September 2013
Short description: | p3@Sox21 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sox21_5end |
Coexpression cluster: | MCL_coexpression_mm9:2092 |
Association with transcript: | -207bp_to_ENSMUST00000082178_5end |
EntrezGene: | Sox21 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 8.71e-18 | 44 |
neurectodermal cell | 8.71e-18 | 44 |
neural cell | 1.44e-16 | 43 |
CNS neuron (sensu Vertebrata) | 3.57e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.57e-15 | 23 |
embryonic cell | 6.89e-12 | 70 |
neuron | 1.87e-10 | 33 |
neuronal stem cell | 1.87e-10 | 33 |
neuroblast | 1.87e-10 | 33 |
electrically signaling cell | 1.87e-10 | 33 |
oligodendrocyte precursor cell | 6.16e-10 | 8 |
neuron of cerebral cortex | 6.86e-09 | 6 |
electrically responsive cell | 3.86e-08 | 39 |
electrically active cell | 3.86e-08 | 39 |
migratory neural crest cell | 1.16e-07 | 10 |
neuron associated cell | 1.16e-07 | 10 |
glial cell (sensu Vertebrata) | 1.16e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.16e-07 | 10 |
glial cell | 1.16e-07 | 10 |
glioblast | 1.16e-07 | 10 |
glioblast (sensu Vertebrata) | 1.16e-07 | 10 |
oligodendrocyte | 5.50e-07 | 6 |
macroglial cell | 5.50e-07 | 6 |
astrocyte | 5.50e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.