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FFCP PHASE1:Mm9::chr5:93354426..93354474,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=27428|HGNC=|UniProt=G3UXH3|association_with_transcript=0bp_to_ENSMUST00000172706_5end|description=CAGE_peak_4_at_Shroom3_5end|id=chr5:93354426..93354474,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,4.48e-07,6;CL:0000677,4.48e-07,6;CL:0000584,4.48e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.18e-10!59;UBERON:0000160!1.97e-10!43;UBERON:0004119!1.34e-08!130;UBERON:0000925!1.34e-08!130;UBERON:0006595!1.34e-08!130;UBERON:0001007!5.30e-08!128;UBERON:0001555!5.30e-08!128;UBERON:0007026!5.30e-08!128;UBERON:0003103!9.03e-08!43;UBERON:0001008!2.38e-07!17;UBERON:0004921!3.25e-07!126;UBERON:0004185!3.25e-07!126;UBERON:0004923!4.68e-07!24;UBERON:0006554!5.62e-07!16;UBERON:0000344!8.56e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.82e-10,51;UBERON:0001008,1.46e-08,19;UBERON:0000344,1.47e-08,15;UBERON:0004923,3.72e-08,24;UBERON:0006554,4.84e-08,18;UBERON:0003103,2.17e-07,43;UBERON:0001242,7.60e-07,13;UBERON:0001262,7.60e-07,13;UBERON:0004786,7.60e-07,13|phase1_expression=0.160148847104794,42.574999732002,35.0349414329943,14.8207463540347,26.0465779572101,21.1527882608981,19.3898491694286,0,0,0,0,0,0,0,0.999329285446988,0.607425802169478,0.699561878128147,0,0.274228867211478,0,1.36069264241712,0,0,27.3587042976725,22.940928106717,35.0281498110162,45.2300095967028,36.1991670912294,3.99049180858385,5.29263272495855,11.9734475753865,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.09012578190223,2.41654801007919,1.94429899074283,0.55994568650145,1.43752564364972,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0.633831403506179,0.677689064138264,0,0,0,0,0,0,0.311068836925433,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.307213066512487,0.131886287730194,0,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0,5.14938114665652,3.40072020480535,1.73918693221007,0.860423876981386,2.03991400112325,0.539703191637817,0.649776417447669,1.34408066129201,2.38755514223978,0,0.259786004602869,0,0.704217098883403,0,0,0,15.8038459938186,16.4683912558814,14.6602089054287,3.9964357901671,4.66088190564909,0.593768556259299,0.520455980298408,0,0.691846491768175,0.301445281105245,0.470354828542819,0.125666591329675,17.5508427091405,2.02439099687876,0,0.161766849947409,0.662524555381181,0,1.86391761218122,0,0.209446706813455,3.83185582812887,0,0,0,0,0,0,0,0,0.20778804455956,0,0.712875546952214,2.23932547098167,12.6361379216837,26.7261156975822,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0.512454881139399,0.843315521037559,11.1242449417777,0.431135985865684,0.189106080167819,0.703804496655795,0,0.278047249225598,1.0447564995665,0,0.796137067273973,0,0,0,1.65700618028402,0.703578179943289,1.44049649168812,1.89395788468168,1.96764231747404,0.462801338662135,0.930135779001631,2.41446061259657,1.86824547787471,0.987359099480883,1.80584210487005,6.64764238276017,13.4503988431306,7.02560368931362,7.78397228810156,0,0,8.26046957459495,7.1401652999157,0.639864751605702,0.232236671860439,0.902072229254653,0.605050573870028,0.667134131534611,0.380451252225118,3.79623249235609,1.15289268306808,0.251335208800269,0.994782360205754,0.779856348476481,1.79763881730844,4.97117514711797,2.78797782556114,0.948339504765408,0.799739588268102,1.1270773567308,1.62921062276251,2.71533482034676,4.62896411276103,3.79419222745544,4.42830443938806,7.37894020854462,5.92306386824642,0.296452627087149,0.166845105716094,0,0,0,0,0.50925170356284,0,0.810676133875177,1.92192989231657,2.87536413054709,1.86070473834252,1.5601883655728,2.02063102357689,2.33216637578486,0.482443521363367,0.369506380333209,0.568474235311454,0.325929952884052,0.339490171550376,0.469380496577004,0.335012514883631,1.42826184531608,0.780534591431195,0.472905432318573,0.221464689648775,0,0.81931657357869,0.345369963731791,1.3018415272336,0,0,7.86822836830458,19.0396354950265,0.160550589987792,0.117211686592203,0,0.757412781613119,0,0,0,0.238968797952552,0,0,0,0,0.395287777946524,0,1.13552068166615,0.35613120733451,1.14020871547503,3.62934270539578,2.65490276679926,1.69946445308487,2.41858845571801,2.64047111658257,2.36241514304618,2.15204603560749,0.775284879504663,1.81766864738753,2.49548164869305,0.948110273807448,1.05418608574999,1.03135543248187,2.04263763452273,0,0.258717367565509,0.428674070063185,0.886701168211368,0.356737635204141,0.493647061806363,1.2178597964584,3.52007562095566,2.33015277950202,7.49796553386871,0.98931751764888,0.161464426695906,0.542816324353403,1.43246812803764,1.96969079694074,2.33184669303881,0,2.22132145037209,0.412773735926445,0.185194527369712,0.188368457004691,1.0935538217682,0.686334519619568,0,0,0,2.86401185404534,0.158167996790568,0.609958401380546,0.432021363287205,0.418176592028937,0.87345025498471,0.674321731924103,1.1571483801547,2.87931536182433,2.72191443912765,63.9979492479533,0,1.19613236835183,0.496375471371293,4.27792614356905,1.54991788173277,2.02747350588934,0.821500670520278,1.5624526181274,0.838874755405687,0,0.288030006257865,0.948033361884535,0.202725215290164,0.308132871494482,0.25984164595559,0.358053391334963,0.39736270956253,0.240390899039938,0.147689527174577,0.403865799792591,0.0762068066549998,0.100826185136841,0.292373642219257,0.192423683280659,0.584384510907845,1.81384306892169,1.55390167361845,1.25599399253266,2.18250001273302,37.4787812422449,2.064507229963,4.2124873581471,2.57242054894879,22.069172577556,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0,0.666740183404846,0.206035057238894,1.28367683836726,0,0.25347929989024,0.377252682772152,0.187283014939765,0.320125762024346,0.631790158511746,1.90517476513229,0.579421629724277,0.192909220463705,0,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0.941093804153306,0.507687647350059,0,1.05227884575137,0.271608227691724,1.12228454331548,0.593175090620871,0.591026894253381,1.22769312950907,0.619747364743864,0.385813221962283,0,0.467863216890817,0.859484216193193,0.57386499620653,0.441182838239031,0|short_description=p4@Shroom3}}
|EntrezGene=27428
|HGNC=
|UniProt=G3UXH3
|association_with_transcript=0bp_to_ENSMUST00000172706_5end
|description=CAGE_peak_4_at_Shroom3_5end
|id=chr5:93354426..93354474,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000239,4.48e-07,6;CL:0000677,4.48e-07,6;CL:0000584,4.48e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!1.18e-10!59;UBERON:0000160!1.97e-10!43;UBERON:0004119!1.34e-08!130;UBERON:0000925!1.34e-08!130;UBERON:0006595!1.34e-08!130;UBERON:0001007!5.30e-08!128;UBERON:0001555!5.30e-08!128;UBERON:0007026!5.30e-08!128;UBERON:0003103!9.03e-08!43;UBERON:0001008!2.38e-07!17;UBERON:0004921!3.25e-07!126;UBERON:0004185!3.25e-07!126;UBERON:0004923!4.68e-07!24;UBERON:0006554!5.62e-07!16;UBERON:0000344!8.56e-07!15
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.82e-10,51;UBERON:0001008,1.46e-08,19;UBERON:0000344,1.47e-08,15;UBERON:0004923,3.72e-08,24;UBERON:0006554,4.84e-08,18;UBERON:0003103,2.17e-07,43;UBERON:0001242,7.60e-07,13;UBERON:0001262,7.60e-07,13;UBERON:0004786,7.60e-07,13
|phase1_expression=0.160148847104794,42.574999732002,35.0349414329943,14.8207463540347,26.0465779572101,21.1527882608981,19.3898491694286,0,0,0,0,0,0,0,0.999329285446988,0.607425802169478,0.699561878128147,0,0.274228867211478,0,1.36069264241712,0,0,27.3587042976725,22.940928106717,35.0281498110162,45.2300095967028,36.1991670912294,3.99049180858385,5.29263272495855,11.9734475753865,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.09012578190223,2.41654801007919,1.94429899074283,0.55994568650145,1.43752564364972,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0.633831403506179,0.677689064138264,0,0,0,0,0,0,0.311068836925433,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.307213066512487,0.131886287730194,0,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0,5.14938114665652,3.40072020480535,1.73918693221007,0.860423876981386,2.03991400112325,0.539703191637817,0.649776417447669,1.34408066129201,2.38755514223978,0,0.259786004602869,0,0.704217098883403,0,0,0,15.8038459938186,16.4683912558814,14.6602089054287,3.9964357901671,4.66088190564909,0.593768556259299,0.520455980298408,0,0.691846491768175,0.301445281105245,0.470354828542819,0.125666591329675,17.5508427091405,2.02439099687876,0,0.161766849947409,0.662524555381181,0,1.86391761218122,0,0.209446706813455,3.83185582812887,0,0,0,0,0,0,0,0,0.20778804455956,0,0.712875546952214,2.23932547098167,12.6361379216837,26.7261156975822,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0.512454881139399,0.843315521037559,11.1242449417777,0.431135985865684,0.189106080167819,0.703804496655795,0,0.278047249225598,1.0447564995665,0,0.796137067273973,0,0,0,1.65700618028402,0.703578179943289,1.44049649168812,1.89395788468168,1.96764231747404,0.462801338662135,0.930135779001631,2.41446061259657,1.86824547787471,0.987359099480883,1.80584210487005,6.64764238276017,13.4503988431306,7.02560368931362,7.78397228810156,0,0,8.26046957459495,7.1401652999157,0.639864751605702,0.232236671860439,0.902072229254653,0.605050573870028,0.667134131534611,0.380451252225118,3.79623249235609,1.15289268306808,0.251335208800269,0.994782360205754,0.779856348476481,1.79763881730844,4.97117514711797,2.78797782556114,0.948339504765408,0.799739588268102,1.1270773567308,1.62921062276251,2.71533482034676,4.62896411276103,3.79419222745544,4.42830443938806,7.37894020854462,5.92306386824642,0.296452627087149,0.166845105716094,0,0,0,0,0.50925170356284,0,0.810676133875177,1.92192989231657,2.87536413054709,1.86070473834252,1.5601883655728,2.02063102357689,2.33216637578486,0.482443521363367,0.369506380333209,0.568474235311454,0.325929952884052,0.339490171550376,0.469380496577004,0.335012514883631,1.42826184531608,0.780534591431195,0.472905432318573,0.221464689648775,0,0.81931657357869,0.345369963731791,1.3018415272336,0,0,7.86822836830458,19.0396354950265,0.160550589987792,0.117211686592203,0,0.757412781613119,0,0,0,0.238968797952552,0,0,0,0,0.395287777946524,0,1.13552068166615,0.35613120733451,1.14020871547503,3.62934270539578,2.65490276679926,1.69946445308487,2.41858845571801,2.64047111658257,2.36241514304618,2.15204603560749,0.775284879504663,1.81766864738753,2.49548164869305,0.948110273807448,1.05418608574999,1.03135543248187,2.04263763452273,0,0.258717367565509,0.428674070063185,0.886701168211368,0.356737635204141,0.493647061806363,1.2178597964584,3.52007562095566,2.33015277950202,7.49796553386871,0.98931751764888,0.161464426695906,0.542816324353403,1.43246812803764,1.96969079694074,2.33184669303881,0,2.22132145037209,0.412773735926445,0.185194527369712,0.188368457004691,1.0935538217682,0.686334519619568,0,0,0,2.86401185404534,0.158167996790568,0.609958401380546,0.432021363287205,0.418176592028937,0.87345025498471,0.674321731924103,1.1571483801547,2.87931536182433,2.72191443912765,63.9979492479533,0,1.19613236835183,0.496375471371293,4.27792614356905,1.54991788173277,2.02747350588934,0.821500670520278,1.5624526181274,0.838874755405687,0,0.288030006257865,0.948033361884535,0.202725215290164,0.308132871494482,0.25984164595559,0.358053391334963,0.39736270956253,0.240390899039938,0.147689527174577,0.403865799792591,0.0762068066549998,0.100826185136841,0.292373642219257,0.192423683280659,0.584384510907845,1.81384306892169,1.55390167361845,1.25599399253266,2.18250001273302,37.4787812422449,2.064507229963,4.2124873581471,2.57242054894879,22.069172577556,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0,0.666740183404846,0.206035057238894,1.28367683836726,0,0.25347929989024,0.377252682772152,0.187283014939765,0.320125762024346,0.631790158511746,1.90517476513229,0.579421629724277,0.192909220463705,0,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0.941093804153306,0.507687647350059,0,1.05227884575137,0.271608227691724,1.12228454331548,0.593175090620871,0.591026894253381,1.22769312950907,0.619747364743864,0.385813221962283,0,0.467863216890817,0.859484216193193,0.57386499620653,0.441182838239031,0
|short_description=p4@Shroom3
}}

Revision as of 08:21, 14 September 2013

Short description:p4@Shroom3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Shroom3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000172706_5end
EntrezGene:Shroom3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Shroom3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I542.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I635.03
CD326+ enterocyte, pool1.CNhs13542.11848-124I314.82
CD326+ enterocyte, pool2.CNhs13197.11849-124I426.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I721.15
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I819.39
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D127.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D222.94
GP2+ M cell, pool1.CNhs13228.11845-124H935.03
GP2+ M cell, pool2.CNhs13231.11846-124I145.23
GP2+ M cell, pool3.CNhs13240.11847-124I236.20
Ileum epithelium, pool1.CNhs13199.10252-104B93.99
Ileum epithelium, pool2.CNhs13232.10253-104C15.29
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D95.15
Mouse Schwann, donor2.CNhs12573.11746-123F93.40
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G216.47
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.66
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H94.66
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A817.55
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B212.64
eyeball, adult.CNhs10484.31-12G426.73
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A211.12
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G16.65
heart, neonate N20.CNhs11127.821-26I613.45
heart, neonate N25.CNhs11196.1351-25D37.03
heart, neonate N30.CNhs11202.1390-42D27.78
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I38.26
intestine, adult.CNhs10496.178-9A37.14
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G74.63
kidney, neonate N10.CNhs11206.758-6D53.79
kidney, neonate N20.CNhs11113.832-19I14.43
kidney, neonate N25.CNhs11122.1353-25F37.38
kidney, neonate N30.CNhs11203.1385-42H15.92
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H219.04
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F87.50
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I12.72
submandibular gland, adult.CNhs10469.59-29C164.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G54.28
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E437.48
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E54.21
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F822.07
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
brush border epithelial cell4.48e-076
gut absorptive cell4.48e-076
enterocyte4.48e-076

Uber anatomy
Ontology termp-valuen
adult organism5.82e-1051
renal system1.46e-0819
mucosa1.47e-0815
organ component layer3.72e-0824
urinary system structure4.84e-0818
compound organ2.17e-0743
intestinal mucosa7.60e-0713
wall of intestine7.60e-0713
gastrointestinal system mucosa7.60e-0713







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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