FFCP PHASE1:Mm9::chr10:59863501..59863512,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:59863501..59863512,+|id=chr10:59863501..59863512,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000878,9.10e-12,2;CL:0000129,9.10e-12,2;CL:0002453,1.10e-10,8;CL:0000333,1.39e-08,10;CL:0000095,1.39e-08,10;CL:0000243,1.39e-08,10;CL:0000123,1.39e-08,10;CL:0000125,1.39e-08,10;CL:0000030,1.39e-08,10;CL:0000339,1.39e-08,10;CL:0000192,2.05e-08,3;CL:0000359,2.05e-08,3;CL:0002539,2.05e-08,3;CL:0000514,2.05e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!1.81e-09!23|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.05e-08,3;UBERON:0004237,2.05e-08,3;UBERON:0004695,2.05e-08,3;UBERON:0002111,2.05e-08,3;UBERON:0004178,2.05e-08,3;UBERON:0000026,2.82e-07,12;UBERON:0004708,2.82e-07,12;UBERON:0002101,2.82e-07,12;UBERON:0004357,2.82e-07,12;UBERON:0004347,2.82e-07,12;UBERON:0005732,2.82e-07,12;UBERON:0005733,2.82e-07,12|phase1_expression=0,0.348975407639361,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65100772129174,4.56196190487815,0.734187008646726,0,1.52617609466313,0.659058548203415,1.36100929351998,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79760066311043,4.2264013585371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558365998002762,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0.289198713839823,0.884610551949874,2.58826959915855,2.20841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.203678727700633,0.497627882440372,0,0,0,0,0.180062129805349,0.150704817835715,0.272145996605311,0.2562274405697,0.281105173679186,0.517406741478031,0,0,0.175951124163949,0.43839146485515,0,1.39300866608867,3.2925141825271,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,1.09775057645525,0,0,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0,0.327726629431476,0.518054945597687,0,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.161464426695906,0.422190474497091,0.119372344003136,1.14898629821543,0,0.18542530201051,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0,0,0.758091635291392,0.25347929989024,0,0,0.128050304809739,0.574354689556133,0.476293691283074,0,0.192909220463705,1.23625770240992,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.436039249896986,0.376437521661322,0.25384382367503,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0,0.197008964751127,1.63692417267876,0.154936841185966,0.771626443924566,0,0.467863216890817,0.429742108096597,1.91288332068843,2.8676884485537,2.78241402744506|short_description=p@chr10:59863501..59863512,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:59863501..59863512,+ | |||
|id=chr10:59863501..59863512,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,9.10e-12,2;CL:0000129,9.10e-12,2;CL:0002453,1.10e-10,8;CL:0000333,1.39e-08,10;CL:0000095,1.39e-08,10;CL:0000243,1.39e-08,10;CL:0000123,1.39e-08,10;CL:0000125,1.39e-08,10;CL:0000030,1.39e-08,10;CL:0000339,1.39e-08,10;CL:0000192,2.05e-08,3;CL:0000359,2.05e-08,3;CL:0002539,2.05e-08,3;CL:0000514,2.05e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.81e-09!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.05e-08,3;UBERON:0004237,2.05e-08,3;UBERON:0004695,2.05e-08,3;UBERON:0002111,2.05e-08,3;UBERON:0004178,2.05e-08,3;UBERON:0000026,2.82e-07,12;UBERON:0004708,2.82e-07,12;UBERON:0002101,2.82e-07,12;UBERON:0004357,2.82e-07,12;UBERON:0004347,2.82e-07,12;UBERON:0005732,2.82e-07,12;UBERON:0005733,2.82e-07,12 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65100772129174,4.56196190487815,0.734187008646726,0,1.52617609466313,0.659058548203415,1.36100929351998,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79760066311043,4.2264013585371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558365998002762,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0.289198713839823,0.884610551949874,2.58826959915855,2.20841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.203678727700633,0.497627882440372,0,0,0,0,0.180062129805349,0.150704817835715,0.272145996605311,0.2562274405697,0.281105173679186,0.517406741478031,0,0,0.175951124163949,0.43839146485515,0,1.39300866608867,3.2925141825271,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,1.09775057645525,0,0,0.102904612379284,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0,0.327726629431476,0.518054945597687,0,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.161464426695906,0.422190474497091,0.119372344003136,1.14898629821543,0,0.18542530201051,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0,0,0.758091635291392,0.25347929989024,0,0,0.128050304809739,0.574354689556133,0.476293691283074,0,0.192909220463705,1.23625770240992,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.436039249896986,0.376437521661322,0.25384382367503,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0,0.197008964751127,1.63692417267876,0.154936841185966,0.771626443924566,0,0.467863216890817,0.429742108096597,1.91288332068843,2.8676884485537,2.78241402744506 | |||
|short_description=p@chr10:59863501..59863512,+ | |||
}} |
Revision as of 17:01, 12 September 2013
Short description: | p@chr10:59863501..59863512, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:59863501..59863512, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 9.10e-12 | 2 |
microglial cell | 9.10e-12 | 2 |
oligodendrocyte precursor cell | 1.10e-10 | 8 |
migratory neural crest cell | 1.39e-08 | 10 |
neuron associated cell | 1.39e-08 | 10 |
glial cell (sensu Vertebrata) | 1.39e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 1.39e-08 | 10 |
glial cell | 1.39e-08 | 10 |
glioblast | 1.39e-08 | 10 |
glioblast (sensu Vertebrata) | 1.39e-08 | 10 |
smooth muscle cell | 2.05e-08 | 3 |
vascular associated smooth muscle cell | 2.05e-08 | 3 |
aortic smooth muscle cell | 2.05e-08 | 3 |
smooth muscle myoblast | 2.05e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.05e-08 | 3 |
blood vessel smooth muscle | 2.05e-08 | 3 |
arterial system smooth muscle | 2.05e-08 | 3 |
artery smooth muscle tissue | 2.05e-08 | 3 |
aorta smooth muscle tissue | 2.05e-08 | 3 |
appendage | 2.82e-07 | 12 |
paired limb/fin | 2.82e-07 | 12 |
limb | 2.82e-07 | 12 |
paired limb/fin bud | 2.82e-07 | 12 |
limb bud | 2.82e-07 | 12 |
limb/fin field | 2.82e-07 | 12 |
limb field | 2.82e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.