FFCP PHASE1:Mm9::chr19:24950169..24950179,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=13063,672195|HGNC=|MCL_coexpression_id=1417|UniProt=P62897|association_with_transcript=-47bp_to_ENSMUST00000073080_5end|description=CAGE_peak_2_at_Cycs_5end,CAGE_peak_2_at_Gm10053_5end|id=chr19:24950169..24950179,+|ontology_enrichment_celltype=CL:0000063!2.04e-27!66;CL:0000144!8.42e-18!121;CL:0000012!8.42e-18!121;CL:0000988!4.97e-16!32;CL:0002032!4.97e-16!32;CL:0000037!4.97e-16!32;CL:0000566!4.97e-16!32;CL:0000837!4.97e-16!32;CL:0002371!5.28e-16!118;CL:0000548!4.04e-15!115;CL:0000004!4.04e-15!115;CL:0000255!4.04e-15!115;CL:0002320!1.61e-13!46;CL:0000134!1.61e-13!46;CL:0000219!1.67e-13!54;CL:0002031!4.68e-13!25;CL:0000066!3.41e-12!25;CL:0002563!9.97e-11!9;CL:0002251!9.97e-11!9;CL:0000838!1.33e-10!12;CL:0002076!2.39e-10!15;CL:0000791!6.23e-10!9;CL:0000789!6.23e-10!9;CL:0002420!6.23e-10!9;CL:0002419!6.23e-10!9;CL:0000790!6.23e-10!9;CL:0000084!1.11e-09!11;CL:0000827!1.11e-09!11;CL:0000738!1.47e-09!17;CL:0002087!1.47e-09!17;CL:0000542!1.50e-09!13;CL:0000051!1.50e-09!13;CL:0000624!4.13e-09!8;CL:0000075!4.16e-09!7;CL:0000034!8.16e-09!97;CL:0000239!1.91e-08!6;CL:0000677!1.91e-08!6;CL:0000212!1.91e-08!6;CL:0000584!1.91e-08!6;CL:0000223!3.89e-08!20;CL:0000049!6.25e-08!19;CL:0000893!1.22e-07!6;CL:0002489!1.22e-07!6;CL:0000898!1.22e-07!6;CL:0000809!1.22e-07!6;CL:0000810!1.22e-07!6;CL:0000895!1.22e-07!6;CL:0000808!1.22e-07!6;CL:0000894!1.22e-07!6;CL:0000806!1.22e-07!6;CL:0000807!1.22e-07!6;CL:0000805!1.22e-07!6;CL:0002425!1.22e-07!6;CL:0002436!1.22e-07!6;CL:0002427!1.22e-07!6;CL:0002428!1.22e-07!6;CL:0002429!1.22e-07!6;CL:0002433!1.22e-07!6;CL:0002431!1.22e-07!6;CL:0002432!1.22e-07!6|ontology_enrichment_celltype_v019_2=CL:0000988,3.99e-22,32;CL:0002032,3.99e-22,32;CL:0000037,3.99e-22,32;CL:0000837,3.99e-22,32;CL:0002320,1.25e-19,46;CL:0000134,1.25e-19,46;CL:0000219,8.46e-19,54;CL:0002031,7.67e-18,25;CL:0000066,4.28e-15,25;CL:0000838,7.18e-14,12;CL:0002563,7.37e-14,9;CL:0002251,7.37e-14,9;CL:0002076,7.93e-14,15;CL:0000738,7.27e-13,17;CL:0002087,7.27e-13,17;CL:0000791,8.60e-13,9;CL:0000789,8.60e-13,9;CL:0002420,8.60e-13,9;CL:0002419,8.60e-13,9;CL:0000790,8.60e-13,9;CL:0000084,1.24e-12,11;CL:0000827,1.24e-12,11;CL:0000542,1.33e-12,13;CL:0000051,1.33e-12,13;CL:0000034,9.56e-12,97;CL:0000624,1.08e-11,8;CL:0000075,1.10e-11,7;CL:0000223,3.08e-11,20;CL:0000049,7.60e-11,19;CL:0000239,8.47e-11,6;CL:0000677,8.47e-11,6;CL:0000584,8.47e-11,6;CL:0000893,1.00e-09,6;CL:0002489,1.00e-09,6;CL:0000898,1.00e-09,6;CL:0000809,1.00e-09,6;CL:0000810,1.00e-09,6;CL:0000895,1.00e-09,6;CL:0000808,1.00e-09,6;CL:0000894,1.00e-09,6;CL:0000806,1.00e-09,6;CL:0000807,1.00e-09,6;CL:0000805,1.00e-09,6;CL:0002425,1.00e-09,6;CL:0002436,1.00e-09,6;CL:0002427,1.00e-09,6;CL:0002428,1.00e-09,6;CL:0002429,1.00e-09,6;CL:0002433,1.00e-09,6;CL:0002431,1.00e-09,6;CL:0002432,1.00e-09,6;CL:0000723,3.03e-09,91;CL:0000048,3.03e-09,91;CL:0000763,8.10e-08,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.13e-15!15;UBERON:0002384!1.61e-13!46;UBERON:0001242!7.29e-13!13;UBERON:0000060!7.29e-13!13;UBERON:0001262!7.29e-13!13;UBERON:0004786!7.29e-13!13;UBERON:0000485!5.04e-12!11;UBERON:0003350!9.97e-11!9;UBERON:0004808!9.97e-11!9;UBERON:0001277!9.97e-11!9;UBERON:0004923!5.94e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.50e-20,15;UBERON:0002384,1.25e-19,46;UBERON:0001242,6.45e-17,13;UBERON:0001262,6.45e-17,13;UBERON:0004786,6.45e-17,13;UBERON:0003350,7.37e-14,9;UBERON:0004808,7.37e-14,9;UBERON:0001277,7.37e-14,9;UBERON:0000485,3.16e-13,11;UBERON:0004923,3.00e-11,24|phase1_expression=0.80074423552397,13.6100408979351,12.2849794635175,57.4682001482977,60.608383323508,2.68606835059024,20.5579123724063,1.93684985162364,17.0354353803517,17.0867104215055,19.6900663459331,10.4501528283891,1.54080656938085,1.83582845079895,0,7.49158489342356,4.89693314689703,3.78554598429885,2.74228867211478,3.81950686618227,0,0,7.57479388502913,33.7584012094088,33.723164316874,14.3557991028755,8.61523992318149,7.54149314400612,59.477330289845,10.0812051903972,12.1951780860418,3.17515336729816,0,0,2.02196133825892,3.15845826181135,2.24586291888606,1.25559489221072,0.7813353445238,0,0.588231488031014,1.36609096991689,0.971020706062307,0,0,0,0,0,0,0,0.139986421625363,0,5.5368259999053,2.17608642603403,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8267744066355,8.84187253249391,2.31891590961342,30.9752595713299,0,0,0,0,0,0,4.1565760736459,4.24007489412408,1.69012103732017,0,0,0,11.6905162146056,9.12095515710355,6.0662933401774,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,1.91704199209472,8.39863823390771,3.43089613097275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61770549850588,13.6394390770799,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.697601834251224,0,0.116765342367169,0,0,0.162137619091711,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,7.61467957346193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18984900995699,0.839708713941948,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.10142408833665,9.77881037043285,14.941730856403,0,0,0,0,0,0,0,0,6.70227411140382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p2@Cycs,p2@Gm10053}} | ||
|EntrezGene=13063,672195 | |||
|HGNC= | |||
|MCL_coexpression_id=1417 | |||
|UniProt=P62897 | |||
|association_with_transcript=-47bp_to_ENSMUST00000073080_5end | |||
|description=CAGE_peak_2_at_Cycs_5end,CAGE_peak_2_at_Gm10053_5end | |||
|id=chr19:24950169..24950179,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.04e-27!66;CL:0000144!8.42e-18!121;CL:0000012!8.42e-18!121;CL:0000988!4.97e-16!32;CL:0002032!4.97e-16!32;CL:0000037!4.97e-16!32;CL:0000566!4.97e-16!32;CL:0000837!4.97e-16!32;CL:0002371!5.28e-16!118;CL:0000548!4.04e-15!115;CL:0000004!4.04e-15!115;CL:0000255!4.04e-15!115;CL:0002320!1.61e-13!46;CL:0000134!1.61e-13!46;CL:0000219!1.67e-13!54;CL:0002031!4.68e-13!25;CL:0000066!3.41e-12!25;CL:0002563!9.97e-11!9;CL:0002251!9.97e-11!9;CL:0000838!1.33e-10!12;CL:0002076!2.39e-10!15;CL:0000791!6.23e-10!9;CL:0000789!6.23e-10!9;CL:0002420!6.23e-10!9;CL:0002419!6.23e-10!9;CL:0000790!6.23e-10!9;CL:0000084!1.11e-09!11;CL:0000827!1.11e-09!11;CL:0000738!1.47e-09!17;CL:0002087!1.47e-09!17;CL:0000542!1.50e-09!13;CL:0000051!1.50e-09!13;CL:0000624!4.13e-09!8;CL:0000075!4.16e-09!7;CL:0000034!8.16e-09!97;CL:0000239!1.91e-08!6;CL:0000677!1.91e-08!6;CL:0000212!1.91e-08!6;CL:0000584!1.91e-08!6;CL:0000223!3.89e-08!20;CL:0000049!6.25e-08!19;CL:0000893!1.22e-07!6;CL:0002489!1.22e-07!6;CL:0000898!1.22e-07!6;CL:0000809!1.22e-07!6;CL:0000810!1.22e-07!6;CL:0000895!1.22e-07!6;CL:0000808!1.22e-07!6;CL:0000894!1.22e-07!6;CL:0000806!1.22e-07!6;CL:0000807!1.22e-07!6;CL:0000805!1.22e-07!6;CL:0002425!1.22e-07!6;CL:0002436!1.22e-07!6;CL:0002427!1.22e-07!6;CL:0002428!1.22e-07!6;CL:0002429!1.22e-07!6;CL:0002433!1.22e-07!6;CL:0002431!1.22e-07!6;CL:0002432!1.22e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.99e-22,32;CL:0002032,3.99e-22,32;CL:0000037,3.99e-22,32;CL:0000837,3.99e-22,32;CL:0002320,1.25e-19,46;CL:0000134,1.25e-19,46;CL:0000219,8.46e-19,54;CL:0002031,7.67e-18,25;CL:0000066,4.28e-15,25;CL:0000838,7.18e-14,12;CL:0002563,7.37e-14,9;CL:0002251,7.37e-14,9;CL:0002076,7.93e-14,15;CL:0000738,7.27e-13,17;CL:0002087,7.27e-13,17;CL:0000791,8.60e-13,9;CL:0000789,8.60e-13,9;CL:0002420,8.60e-13,9;CL:0002419,8.60e-13,9;CL:0000790,8.60e-13,9;CL:0000084,1.24e-12,11;CL:0000827,1.24e-12,11;CL:0000542,1.33e-12,13;CL:0000051,1.33e-12,13;CL:0000034,9.56e-12,97;CL:0000624,1.08e-11,8;CL:0000075,1.10e-11,7;CL:0000223,3.08e-11,20;CL:0000049,7.60e-11,19;CL:0000239,8.47e-11,6;CL:0000677,8.47e-11,6;CL:0000584,8.47e-11,6;CL:0000893,1.00e-09,6;CL:0002489,1.00e-09,6;CL:0000898,1.00e-09,6;CL:0000809,1.00e-09,6;CL:0000810,1.00e-09,6;CL:0000895,1.00e-09,6;CL:0000808,1.00e-09,6;CL:0000894,1.00e-09,6;CL:0000806,1.00e-09,6;CL:0000807,1.00e-09,6;CL:0000805,1.00e-09,6;CL:0002425,1.00e-09,6;CL:0002436,1.00e-09,6;CL:0002427,1.00e-09,6;CL:0002428,1.00e-09,6;CL:0002429,1.00e-09,6;CL:0002433,1.00e-09,6;CL:0002431,1.00e-09,6;CL:0002432,1.00e-09,6;CL:0000723,3.03e-09,91;CL:0000048,3.03e-09,91;CL:0000763,8.10e-08,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.13e-15!15;UBERON:0002384!1.61e-13!46;UBERON:0001242!7.29e-13!13;UBERON:0000060!7.29e-13!13;UBERON:0001262!7.29e-13!13;UBERON:0004786!7.29e-13!13;UBERON:0000485!5.04e-12!11;UBERON:0003350!9.97e-11!9;UBERON:0004808!9.97e-11!9;UBERON:0001277!9.97e-11!9;UBERON:0004923!5.94e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.50e-20,15;UBERON:0002384,1.25e-19,46;UBERON:0001242,6.45e-17,13;UBERON:0001262,6.45e-17,13;UBERON:0004786,6.45e-17,13;UBERON:0003350,7.37e-14,9;UBERON:0004808,7.37e-14,9;UBERON:0001277,7.37e-14,9;UBERON:0000485,3.16e-13,11;UBERON:0004923,3.00e-11,24 | |||
|phase1_expression=0.80074423552397,13.6100408979351,12.2849794635175,57.4682001482977,60.608383323508,2.68606835059024,20.5579123724063,1.93684985162364,17.0354353803517,17.0867104215055,19.6900663459331,10.4501528283891,1.54080656938085,1.83582845079895,0,7.49158489342356,4.89693314689703,3.78554598429885,2.74228867211478,3.81950686618227,0,0,7.57479388502913,33.7584012094088,33.723164316874,14.3557991028755,8.61523992318149,7.54149314400612,59.477330289845,10.0812051903972,12.1951780860418,3.17515336729816,0,0,2.02196133825892,3.15845826181135,2.24586291888606,1.25559489221072,0.7813353445238,0,0.588231488031014,1.36609096991689,0.971020706062307,0,0,0,0,0,0,0,0.139986421625363,0,5.5368259999053,2.17608642603403,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8267744066355,8.84187253249391,2.31891590961342,30.9752595713299,0,0,0,0,0,0,4.1565760736459,4.24007489412408,1.69012103732017,0,0,0,11.6905162146056,9.12095515710355,6.0662933401774,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,1.91704199209472,8.39863823390771,3.43089613097275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61770549850588,13.6394390770799,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.697601834251224,0,0.116765342367169,0,0,0.162137619091711,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,7.61467957346193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18984900995699,0.839708713941948,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.10142408833665,9.77881037043285,14.941730856403,0,0,0,0,0,0,0,0,6.70227411140382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Cycs,p2@Gm10053 | |||
}} |
Revision as of 17:15, 13 September 2013
Short description: | p2@Cycs, p2@Gm10053 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cycs_5end, CAGE_peak_2_at_Gm10053_5end |
Coexpression cluster: | MCL_coexpression_mm9:1417 |
Association with transcript: | -47bp_to_ENSMUST00000073080_5end |
EntrezGene: | 13063,672195 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucosa | 2.50e-20 | 15 |
connective tissue | 1.25e-19 | 46 |
intestinal mucosa | 6.45e-17 | 13 |
wall of intestine | 6.45e-17 | 13 |
gastrointestinal system mucosa | 6.45e-17 | 13 |
epithelium of mucosa | 7.37e-14 | 9 |
gastrointestinal system epithelium | 7.37e-14 | 9 |
intestinal epithelium | 7.37e-14 | 9 |
simple columnar epithelium | 3.16e-13 | 11 |
organ component layer | 3.00e-11 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.