FFCP PHASE1:Mm9::chr12:114720460..114720475,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114720460..114720475,-|id=chr12:114720460..114720475,-|ontology_enrichment_celltype=CL:0000553!1.13e-08!6;CL:0000556!1.13e-08!6|ontology_enrichment_celltype_v019_2=CL:0000553,4.26e-24,6;CL:0000556,4.26e-24,6;CL:0002031,4.38e-17,25;CL:0000050,3.24e-16,9;CL:0000988,2.66e-13,32;CL:0002032,2.66e-13,32;CL:0000037,2.66e-13,32;CL:0000837,2.66e-13,32;CL:0000839,2.42e-11,13;CL:0000945,3.74e-10,1;CL:0000236,3.74e-10,1;CL:0000826,3.74e-10,1;CL:0000763,2.83e-09,16;CL:0002320,3.64e-09,46;CL:0000134,3.64e-09,46;CL:0000049,7.43e-08,19;CL:0000219,9.36e-08,54;CL:0000838,3.51e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!5.36e-08!6;UBERON:0004457!5.36e-08!6;UBERON:0000042!5.36e-08!6;UBERON:0004854!5.36e-08!6;UBERON:0009034!5.36e-08!6;UBERON:0002095!5.36e-08!6;UBERON:0004782!5.36e-08!6;UBERON:0003281!5.36e-08!6;UBERON:0009664!5.36e-08!6;UBERON:0002296!5.36e-08!6;UBERON:0005602!5.36e-08!6;UBERON:0001179!5.36e-08!6;UBERON:0006293!5.36e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.48e-10,1;UBERON:0001097,2.48e-10,1;UBERON:0003968,2.48e-10,1;UBERON:0001467,2.48e-10,1;UBERON:0002371,2.83e-09,16;UBERON:0002384,3.64e-09,46;UBERON:0002193,9.89e-09,48;UBERON:0002405,9.89e-09,48;UBERON:0002390,6.60e-07,45;UBERON:0003061,6.60e-07,45;UBERON:0001474,8.10e-07,22;UBERON:0004765,8.10e-07,22;UBERON:0001434,8.10e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.21485160433896,0,4.57420139769445,4.52477630898938,3.81950686618227,0.0850432901510698,1.58865521921416,1.82839852397255,0.47997726838022,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01339127269284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40194402200192,0.148442139064825,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.863088412352432,0.486405680325106,0,0,0,0,0.252578877947112,0,0,0.923765950833023,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0.185194527369712,1.31857919903284,0.820165366326151,1.14389086603261,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0.231867835620421|short_description=p@chr12:114720460..114720475,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:114720460..114720475,- | |||
|id=chr12:114720460..114720475,- | |||
|ontology_enrichment_celltype=CL:0000553!1.13e-08!6;CL:0000556!1.13e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.26e-24,6;CL:0000556,4.26e-24,6;CL:0002031,4.38e-17,25;CL:0000050,3.24e-16,9;CL:0000988,2.66e-13,32;CL:0002032,2.66e-13,32;CL:0000037,2.66e-13,32;CL:0000837,2.66e-13,32;CL:0000839,2.42e-11,13;CL:0000945,3.74e-10,1;CL:0000236,3.74e-10,1;CL:0000826,3.74e-10,1;CL:0000763,2.83e-09,16;CL:0002320,3.64e-09,46;CL:0000134,3.64e-09,46;CL:0000049,7.43e-08,19;CL:0000219,9.36e-08,54;CL:0000838,3.51e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!5.36e-08!6;UBERON:0004457!5.36e-08!6;UBERON:0000042!5.36e-08!6;UBERON:0004854!5.36e-08!6;UBERON:0009034!5.36e-08!6;UBERON:0002095!5.36e-08!6;UBERON:0004782!5.36e-08!6;UBERON:0003281!5.36e-08!6;UBERON:0009664!5.36e-08!6;UBERON:0002296!5.36e-08!6;UBERON:0005602!5.36e-08!6;UBERON:0001179!5.36e-08!6;UBERON:0006293!5.36e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.48e-10,1;UBERON:0001097,2.48e-10,1;UBERON:0003968,2.48e-10,1;UBERON:0001467,2.48e-10,1;UBERON:0002371,2.83e-09,16;UBERON:0002384,3.64e-09,46;UBERON:0002193,9.89e-09,48;UBERON:0002405,9.89e-09,48;UBERON:0002390,6.60e-07,45;UBERON:0003061,6.60e-07,45;UBERON:0001474,8.10e-07,22;UBERON:0004765,8.10e-07,22;UBERON:0001434,8.10e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.21485160433896,0,4.57420139769445,4.52477630898938,3.81950686618227,0.0850432901510698,1.58865521921416,1.82839852397255,0.47997726838022,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01339127269284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40194402200192,0.148442139064825,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.863088412352432,0.486405680325106,0,0,0,0,0.252578877947112,0,0,0.923765950833023,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0.185194527369712,1.31857919903284,0.820165366326151,1.14389086603261,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr12:114720460..114720475,- | |||
}} |
Revision as of 22:27, 12 September 2013
Short description: | p@chr12:114720460..114720475, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114720460..114720475, - |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.26e-24 | 6 |
megakaryocyte | 4.26e-24 | 6 |
hematopoietic lineage restricted progenitor cell | 4.38e-17 | 25 |
megakaryocyte-erythroid progenitor cell | 3.24e-16 | 9 |
hematopoietic cell | 2.66e-13 | 32 |
hematopoietic oligopotent progenitor cell | 2.66e-13 | 32 |
hematopoietic stem cell | 2.66e-13 | 32 |
hematopoietic multipotent progenitor cell | 2.66e-13 | 32 |
myeloid lineage restricted progenitor cell | 2.42e-11 | 13 |
lymphocyte of B lineage | 3.74e-10 | 1 |
B cell | 3.74e-10 | 1 |
pro-B cell | 3.74e-10 | 1 |
myeloid cell | 2.83e-09 | 16 |
connective tissue cell | 3.64e-09 | 46 |
mesenchymal cell | 3.64e-09 | 46 |
common myeloid progenitor | 7.43e-08 | 19 |
motile cell | 9.36e-08 | 54 |
lymphoid lineage restricted progenitor cell | 3.51e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.48e-10 | 1 |
axillary lymph node | 2.48e-10 | 1 |
peripheral lymph node | 2.48e-10 | 1 |
shoulder | 2.48e-10 | 1 |
bone marrow | 2.83e-09 | 16 |
connective tissue | 3.64e-09 | 46 |
hemolymphoid system | 9.89e-09 | 48 |
immune system | 9.89e-09 | 48 |
hematopoietic system | 6.60e-07 | 45 |
blood island | 6.60e-07 | 45 |
bone element | 8.10e-07 | 22 |
skeletal element | 8.10e-07 | 22 |
skeletal system | 8.10e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.