FFCP PHASE1:Mm9::chr6:48854978..48854990,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76507|HGNC=|MCL_coexpression_id=56|UniProt=E9PYN9,Q3UKB9,Q8JZQ5|association_with_transcript=0bp_to_ENSMUST00000162948,ENSMUST00000167529,NM_001161621,NM_001161622,uc009bwb.2,uc012ell.1_5end|description=CAGE_peak_2_at_Abp1_5end|id=chr6:48854978..48854990,+|ontology_enrichment_celltype=CL:0000349!3.72e-07!3;CL:0000351!3.72e-07!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.62e-16!3;UBERON:0000478!1.62e-16!3;UBERON:0000158!1.62e-16!3;UBERON:0004871!4.47e-15!3;UBERON:0004175!6.21e-14!9;UBERON:0005795!1.34e-12!4;UBERON:0000995!1.34e-12!4;UBERON:0003100!8.07e-12!11;UBERON:0001987!1.22e-11!2;UBERON:0003124!1.22e-11!2;UBERON:0004340!1.22e-11!2;UBERON:0003134!9.07e-11!8;UBERON:0001343!3.30e-10!2;UBERON:0004910!3.30e-10!2;UBERON:0004909!3.30e-10!2;UBERON:0005154!3.30e-10!2;UBERON:0005295!3.30e-10!2;UBERON:0005297!3.30e-10!2;UBERON:0005294!3.30e-10!2;UBERON:0010141!3.30e-10!2;UBERON:0005891!3.30e-10!2;UBERON:0003975!3.54e-10!5;UBERON:0003133!1.30e-09!24;UBERON:0000474!1.38e-09!9;UBERON:0005156!8.14e-09!26;UBERON:0000990!8.14e-09!26;UBERON:0000358!3.72e-07!3;UBERON:0000307!3.72e-07!3;UBERON:0001301!4.30e-07!3;UBERON:0006555!4.30e-07!3;UBERON:0005103!4.30e-07!3;UBERON:0000083!4.30e-07!3;UBERON:0009201!4.30e-07!3;UBERON:0004819!4.30e-07!3;UBERON:0006553!4.30e-07!3;UBERON:0003074!4.30e-07!3;UBERON:0003060!4.30e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.65e-65,3;UBERON:0000478,3.65e-65,3;UBERON:0000158,3.65e-65,3;UBERON:0005795,1.60e-49,4;UBERON:0000995,1.60e-49,4;UBERON:0001987,2.75e-44,2;UBERON:0003124,2.75e-44,2;UBERON:0004340,2.75e-44,2;UBERON:0003975,7.27e-40,5;UBERON:0003134,2.39e-25,8;UBERON:0006834,5.07e-23,1;UBERON:0004175,1.19e-22,9;UBERON:0000474,1.19e-22,9;UBERON:0000305,1.39e-22,1;UBERON:0003100,1.00e-18,11;UBERON:0003133,4.35e-09,24;UBERON:0004923,4.94e-09,24;UBERON:0005156,1.87e-08,26;UBERON:0000990,1.87e-08,26;UBERON:0004871,1.88e-08,3;UBERON:0007023,1.20e-07,51|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.65182387070309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,613.197173170475,58.4656515584144,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,76.1990850331799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Abp1}} | ||
|EntrezGene=76507 | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|UniProt=E9PYN9,Q3UKB9,Q8JZQ5 | |||
|association_with_transcript=0bp_to_ENSMUST00000162948,ENSMUST00000167529,NM_001161621,NM_001161622,uc009bwb.2,uc012ell.1_5end | |||
|description=CAGE_peak_2_at_Abp1_5end | |||
|id=chr6:48854978..48854990,+ | |||
|ontology_enrichment_celltype=CL:0000349!3.72e-07!3;CL:0000351!3.72e-07!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.62e-16!3;UBERON:0000478!1.62e-16!3;UBERON:0000158!1.62e-16!3;UBERON:0004871!4.47e-15!3;UBERON:0004175!6.21e-14!9;UBERON:0005795!1.34e-12!4;UBERON:0000995!1.34e-12!4;UBERON:0003100!8.07e-12!11;UBERON:0001987!1.22e-11!2;UBERON:0003124!1.22e-11!2;UBERON:0004340!1.22e-11!2;UBERON:0003134!9.07e-11!8;UBERON:0001343!3.30e-10!2;UBERON:0004910!3.30e-10!2;UBERON:0004909!3.30e-10!2;UBERON:0005154!3.30e-10!2;UBERON:0005295!3.30e-10!2;UBERON:0005297!3.30e-10!2;UBERON:0005294!3.30e-10!2;UBERON:0010141!3.30e-10!2;UBERON:0005891!3.30e-10!2;UBERON:0003975!3.54e-10!5;UBERON:0003133!1.30e-09!24;UBERON:0000474!1.38e-09!9;UBERON:0005156!8.14e-09!26;UBERON:0000990!8.14e-09!26;UBERON:0000358!3.72e-07!3;UBERON:0000307!3.72e-07!3;UBERON:0001301!4.30e-07!3;UBERON:0006555!4.30e-07!3;UBERON:0005103!4.30e-07!3;UBERON:0000083!4.30e-07!3;UBERON:0009201!4.30e-07!3;UBERON:0004819!4.30e-07!3;UBERON:0006553!4.30e-07!3;UBERON:0003074!4.30e-07!3;UBERON:0003060!4.30e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.65e-65,3;UBERON:0000478,3.65e-65,3;UBERON:0000158,3.65e-65,3;UBERON:0005795,1.60e-49,4;UBERON:0000995,1.60e-49,4;UBERON:0001987,2.75e-44,2;UBERON:0003124,2.75e-44,2;UBERON:0004340,2.75e-44,2;UBERON:0003975,7.27e-40,5;UBERON:0003134,2.39e-25,8;UBERON:0006834,5.07e-23,1;UBERON:0004175,1.19e-22,9;UBERON:0000474,1.19e-22,9;UBERON:0000305,1.39e-22,1;UBERON:0003100,1.00e-18,11;UBERON:0003133,4.35e-09,24;UBERON:0004923,4.94e-09,24;UBERON:0005156,1.87e-08,26;UBERON:0000990,1.87e-08,26;UBERON:0004871,1.88e-08,3;UBERON:0007023,1.20e-07,51 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.65182387070309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,613.197173170475,58.4656515584144,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,76.1990850331799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Abp1 | |||
}} |
Revision as of 10:11, 14 September 2013
Short description: | p2@Abp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Abp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | 0bp_to_ENSMUST00000162948, ENSMUST00000167529, NM_001161621, NM_001161622, uc009bwb.2, uc012ell.1_5end |
EntrezGene: | Abp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.65e-65 | 3 |
extraembryonic structure | 3.65e-65 | 3 |
membranous layer | 3.65e-65 | 3 |
embryonic uterus | 1.60e-49 | 4 |
uterus | 1.60e-49 | 4 |
placenta | 2.75e-44 | 2 |
chorion | 2.75e-44 | 2 |
allantois | 2.75e-44 | 2 |
internal female genitalia | 7.27e-40 | 5 |
female reproductive organ | 2.39e-25 | 8 |
uterus or analog | 5.07e-23 | 1 |
internal genitalia | 1.19e-22 | 9 |
female reproductive system | 1.19e-22 | 9 |
amnion | 1.39e-22 | 1 |
female organism | 1.00e-18 | 11 |
reproductive organ | 4.35e-09 | 24 |
organ component layer | 4.94e-09 | 24 |
reproductive structure | 1.87e-08 | 26 |
reproductive system | 1.87e-08 | 26 |
somatic layer of lateral plate mesoderm | 1.88e-08 | 3 |
adult organism | 1.20e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.