FFCP PHASE1:Mm9::chr9:103351483..103351498,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=107993|HGNC=|MCL_coexpression_id=18|UniProt=Q6NVD9|association_with_transcript=-57bp_to_ENSMUST00000136636,uc009rgu.1_5end|description=CAGE_peak_3_at_Bfsp2_5end|id=chr9:103351483..103351498,-|ontology_enrichment_celltype=CL:0000553!1.69e-09!6;CL:0000556!1.69e-09!6|ontology_enrichment_celltype_v019_2=CL:0000553,9.28e-15,6;CL:0000556,9.28e-15,6;CL:0000050,6.67e-10,9;CL:0002031,1.06e-09,25;CL:0000988,2.00e-07,32;CL:0002032,2.00e-07,32;CL:0000037,2.00e-07,32;CL:0000837,2.00e-07,32;CL:0000839,6.80e-07,13;CL:0000945,8.36e-07,1;CL:0000236,8.36e-07,1;CL:0000826,8.36e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!9.15e-09!6;UBERON:0004457!9.15e-09!6;UBERON:0000042!9.15e-09!6;UBERON:0004854!9.15e-09!6;UBERON:0009034!9.15e-09!6;UBERON:0002095!9.15e-09!6;UBERON:0004782!9.15e-09!6;UBERON:0003281!9.15e-09!6;UBERON:0009664!9.15e-09!6;UBERON:0002296!9.15e-09!6;UBERON:0005602!9.15e-09!6;UBERON:0001179!9.15e-09!6;UBERON:0006293!9.15e-09!6;UBERON:0002405!2.11e-08!70;UBERON:0002529!4.45e-08!6;UBERON:0007823!2.98e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002465,3.63e-08,3;UBERON:0002106,3.89e-08,6;UBERON:0004457,3.89e-08,6;UBERON:0000042,3.89e-08,6;UBERON:0004854,3.89e-08,6;UBERON:0009034,3.89e-08,6;UBERON:0002095,3.89e-08,6;UBERON:0004782,3.89e-08,6;UBERON:0003281,3.89e-08,6;UBERON:0009664,3.89e-08,6;UBERON:0002296,3.89e-08,6;UBERON:0005602,3.89e-08,6;UBERON:0001179,3.89e-08,6;UBERON:0006293,3.89e-08,6;UBERON:0002193,8.32e-08,48;UBERON:0002405,8.32e-08,48;UBERON:0000029,6.50e-07,1;UBERON:0001097,6.50e-07,1;UBERON:0003968,6.50e-07,1;UBERON:0001467,6.50e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,0.809901069559304,0.699561878128147,8.3597473819933,10.8320402548534,4.66828616977833,0,1.19149141441062,1.04479915655574,1.91990907352088,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0,0,8.05356509077134,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,9.06282592765101,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0.161766849947409,2.20841518460394,0.484875253135222,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.995255764880744,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0.482354319504834,1.52775511068852,2.5892652370573,0.648540907100142,0.823684239564244,0,0.744281895337007,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36696704638282,0.619160603889667,1.48155621895769,0.565105371014073,0.820165366326151,1.83022538565218,0.849892149969277,1.6794174278839,3.17859939750175,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0.165458490457098,0,0,0,0,0,0,0,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.0640251524048693,0,0,0.115884325944855,0,0,0.441596760403192,0,0.177475806159338,0,0,0.282328141245992,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.695603506861264|short_description=p3@Bfsp2}} | ||
|EntrezGene=107993 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=Q6NVD9 | |||
|association_with_transcript=-57bp_to_ENSMUST00000136636,uc009rgu.1_5end | |||
|description=CAGE_peak_3_at_Bfsp2_5end | |||
|id=chr9:103351483..103351498,- | |||
|ontology_enrichment_celltype=CL:0000553!1.69e-09!6;CL:0000556!1.69e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.28e-15,6;CL:0000556,9.28e-15,6;CL:0000050,6.67e-10,9;CL:0002031,1.06e-09,25;CL:0000988,2.00e-07,32;CL:0002032,2.00e-07,32;CL:0000037,2.00e-07,32;CL:0000837,2.00e-07,32;CL:0000839,6.80e-07,13;CL:0000945,8.36e-07,1;CL:0000236,8.36e-07,1;CL:0000826,8.36e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!9.15e-09!6;UBERON:0004457!9.15e-09!6;UBERON:0000042!9.15e-09!6;UBERON:0004854!9.15e-09!6;UBERON:0009034!9.15e-09!6;UBERON:0002095!9.15e-09!6;UBERON:0004782!9.15e-09!6;UBERON:0003281!9.15e-09!6;UBERON:0009664!9.15e-09!6;UBERON:0002296!9.15e-09!6;UBERON:0005602!9.15e-09!6;UBERON:0001179!9.15e-09!6;UBERON:0006293!9.15e-09!6;UBERON:0002405!2.11e-08!70;UBERON:0002529!4.45e-08!6;UBERON:0007823!2.98e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,3.63e-08,3;UBERON:0002106,3.89e-08,6;UBERON:0004457,3.89e-08,6;UBERON:0000042,3.89e-08,6;UBERON:0004854,3.89e-08,6;UBERON:0009034,3.89e-08,6;UBERON:0002095,3.89e-08,6;UBERON:0004782,3.89e-08,6;UBERON:0003281,3.89e-08,6;UBERON:0009664,3.89e-08,6;UBERON:0002296,3.89e-08,6;UBERON:0005602,3.89e-08,6;UBERON:0001179,3.89e-08,6;UBERON:0006293,3.89e-08,6;UBERON:0002193,8.32e-08,48;UBERON:0002405,8.32e-08,48;UBERON:0000029,6.50e-07,1;UBERON:0001097,6.50e-07,1;UBERON:0003968,6.50e-07,1;UBERON:0001467,6.50e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,0.809901069559304,0.699561878128147,8.3597473819933,10.8320402548534,4.66828616977833,0,1.19149141441062,1.04479915655574,1.91990907352088,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0,0,8.05356509077134,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,9.06282592765101,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0.161766849947409,2.20841518460394,0.484875253135222,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.995255764880744,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0.482354319504834,1.52775511068852,2.5892652370573,0.648540907100142,0.823684239564244,0,0.744281895337007,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36696704638282,0.619160603889667,1.48155621895769,0.565105371014073,0.820165366326151,1.83022538565218,0.849892149969277,1.6794174278839,3.17859939750175,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0.165458490457098,0,0,0,0,0,0,0,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.0640251524048693,0,0,0.115884325944855,0,0,0.441596760403192,0,0.177475806159338,0,0,0.282328141245992,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.695603506861264 | |||
|short_description=p3@Bfsp2 | |||
}} |
Revision as of 16:40, 14 September 2013
Short description: | p3@Bfsp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Bfsp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -57bp_to_ENSMUST00000136636, uc009rgu.1_5end |
EntrezGene: | Bfsp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.28e-15 | 6 |
megakaryocyte | 9.28e-15 | 6 |
megakaryocyte-erythroid progenitor cell | 6.67e-10 | 9 |
hematopoietic lineage restricted progenitor cell | 1.06e-09 | 25 |
hematopoietic cell | 2.00e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.00e-07 | 32 |
hematopoietic stem cell | 2.00e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.00e-07 | 32 |
myeloid lineage restricted progenitor cell | 6.80e-07 | 13 |
lymphocyte of B lineage | 8.36e-07 | 1 |
B cell | 8.36e-07 | 1 |
pro-B cell | 8.36e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 3.63e-08 | 3 |
spleen | 3.89e-08 | 6 |
cavity lining | 3.89e-08 | 6 |
serous membrane | 3.89e-08 | 6 |
gastrointestinal system mesentery | 3.89e-08 | 6 |
stomach region | 3.89e-08 | 6 |
mesentery | 3.89e-08 | 6 |
gastrointestinal system serosa | 3.89e-08 | 6 |
mesentery of stomach | 3.89e-08 | 6 |
gut mesentery | 3.89e-08 | 6 |
dorsal mesentery | 3.89e-08 | 6 |
dorsal mesogastrium | 3.89e-08 | 6 |
peritoneal cavity | 3.89e-08 | 6 |
spleen primordium | 3.89e-08 | 6 |
hemolymphoid system | 8.32e-08 | 48 |
immune system | 8.32e-08 | 48 |
lymph node | 6.50e-07 | 1 |
axillary lymph node | 6.50e-07 | 1 |
peripheral lymph node | 6.50e-07 | 1 |
shoulder | 6.50e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.