FFCP PHASE1:Mm9::chr7:16832824..16832828,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=116|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:16832824..16832828,-|id=chr7:16832824..16832828,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002194,1.90e-23,4;CL:0000766,1.90e-23,4;CL:0000234,1.90e-23,4;CL:0000576,1.90e-23,4;CL:0000235,1.90e-23,4;CL:0000864,1.90e-23,4;CL:0002009,1.90e-23,4;CL:0000040,1.90e-23,4;CL:0000559,1.90e-23,4;CL:0002092,1.96e-19,3;CL:0002540,1.96e-19,3;CL:0000473,1.54e-13,7;CL:0000557,1.54e-13,7;CL:0002476,1.25e-12,2;CL:0000878,1.64e-12,2;CL:0000129,1.64e-12,2;CL:0000839,2.16e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.06e-18,3;DOID:4045,3.06e-18,3;DOID:0050686,2.06e-09,6|ontology_enrichment_uberon=UBERON:0004872!6.41e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.28e-21,32;UBERON:0002371,8.31e-18,16;UBERON:0001474,1.67e-16,22;UBERON:0004765,1.67e-16,22;UBERON:0001434,1.67e-16,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5783284909501,5.4693474116666,5.23523743973798,18.8234076169925,15.7100461540443,10.1957174136542,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0,0,37.7957881258188,26.6993917893083,36.2344858622511,8.38880309451533,4.61061966385865,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0.304465478312141,0.461230994512117,0.150722640552623,0,0.125666591329675,0,0.144599356919912,1.76922110389975,0,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0.248813941220186,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0.656669856316381,0.0810688095458557,0.146199987425332,0.219550115291051,0.536825675041487,0,0,0,0,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0.324270453550071,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0.234690248288502,0,0,0.585400943573396,0.157635144106191,0,0,0.327726629431476,0.690739927463582,0.578596234326046,4.52373851817817,16.3171705145613,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0,0.683483523191411,0.619160603889667,0.925972636848558,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0,0,0,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0.685738504770831,0.532427418478012,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0,0,0.237270036248348,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0.220591419119515,0|short_description=p@chr7:16832824..16832828,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=116 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:16832824..16832828,- | |||
|id=chr7:16832824..16832828,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.90e-23,4;CL:0000766,1.90e-23,4;CL:0000234,1.90e-23,4;CL:0000576,1.90e-23,4;CL:0000235,1.90e-23,4;CL:0000864,1.90e-23,4;CL:0002009,1.90e-23,4;CL:0000040,1.90e-23,4;CL:0000559,1.90e-23,4;CL:0002092,1.96e-19,3;CL:0002540,1.96e-19,3;CL:0000473,1.54e-13,7;CL:0000557,1.54e-13,7;CL:0002476,1.25e-12,2;CL:0000878,1.64e-12,2;CL:0000129,1.64e-12,2;CL:0000839,2.16e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.06e-18,3;DOID:4045,3.06e-18,3;DOID:0050686,2.06e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0004872!6.41e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.28e-21,32;UBERON:0002371,8.31e-18,16;UBERON:0001474,1.67e-16,22;UBERON:0004765,1.67e-16,22;UBERON:0001434,1.67e-16,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5783284909501,5.4693474116666,5.23523743973798,18.8234076169925,15.7100461540443,10.1957174136542,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0,0,37.7957881258188,26.6993917893083,36.2344858622511,8.38880309451533,4.61061966385865,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0.304465478312141,0.461230994512117,0.150722640552623,0,0.125666591329675,0,0.144599356919912,1.76922110389975,0,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0.248813941220186,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0.656669856316381,0.0810688095458557,0.146199987425332,0.219550115291051,0.536825675041487,0,0,0,0,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0.324270453550071,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0.234690248288502,0,0,0.585400943573396,0.157635144106191,0,0,0.327726629431476,0.690739927463582,0.578596234326046,4.52373851817817,16.3171705145613,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0,0.683483523191411,0.619160603889667,0.925972636848558,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0,0,0,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0.685738504770831,0.532427418478012,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0,0,0.237270036248348,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p@chr7:16832824..16832828,- | |||
}} |
Revision as of 12:33, 14 September 2013
Short description: | p@chr7:16832824..16832828, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:16832824..16832828, - |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.90e-23 | 4 |
myeloid leukocyte | 1.90e-23 | 4 |
phagocyte | 1.90e-23 | 4 |
monocyte | 1.90e-23 | 4 |
macrophage | 1.90e-23 | 4 |
tissue-resident macrophage | 1.90e-23 | 4 |
macrophage dendritic cell progenitor | 1.90e-23 | 4 |
monoblast | 1.90e-23 | 4 |
promonocyte | 1.90e-23 | 4 |
bone marrow cell | 1.96e-19 | 3 |
mesenchymal stem cell of the bone marrow | 1.96e-19 | 3 |
defensive cell | 1.54e-13 | 7 |
granulocyte monocyte progenitor cell | 1.54e-13 | 7 |
bone marrow macrophage | 1.25e-12 | 2 |
central nervous system macrophage | 1.64e-12 | 2 |
microglial cell | 1.64e-12 | 2 |
myeloid lineage restricted progenitor cell | 2.16e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.28e-21 | 32 |
bone marrow | 8.31e-18 | 16 |
bone element | 1.67e-16 | 22 |
skeletal element | 1.67e-16 | 22 |
skeletal system | 1.67e-16 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.06e-18 | 3 |
muscle cancer | 3.06e-18 | 3 |
organ system cancer | 2.06e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.