FFCP PHASE1:Mm9::chr10:91627519..91627536,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:91627519..91627536,-|id=chr10:91627519..91627536,-|ontology_enrichment_celltype=CL:0000117!1.47e-12!23;CL:0000337!1.47e-12!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.00e-13,23;CL:0000337,1.00e-13,23;CL:0000540,1.14e-08,33;CL:0000047,1.14e-08,33;CL:0000031,1.14e-08,33;CL:0000404,1.14e-08,33;CL:0002612,5.05e-08,3;CL:0002614,2.02e-07,3;CL:0002613,3.86e-07,3;CL:0002319,4.54e-07,43;CL:0000393,6.69e-07,39;CL:0000211,6.69e-07,39;CL:0000221,7.70e-07,44;CL:0000133,7.70e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.11e-20!63;UBERON:0003056!1.38e-20!49;UBERON:0002346!1.54e-19!71;UBERON:0003075!1.54e-19!71;UBERON:0007284!1.54e-19!71;UBERON:0001049!1.65e-17!52;UBERON:0005068!1.65e-17!52;UBERON:0006241!1.65e-17!52;UBERON:0007135!1.65e-17!52;UBERON:0001017!4.09e-16!73;UBERON:0005743!4.09e-16!73;UBERON:0000955!4.62e-16!50;UBERON:0006238!4.62e-16!50;UBERON:0002616!2.70e-15!49;UBERON:0000073!3.12e-15!75;UBERON:0001016!3.12e-15!75;UBERON:0004121!5.20e-15!102;UBERON:0000924!5.20e-15!102;UBERON:0006601!5.20e-15!102;UBERON:0003080!1.74e-13!40;UBERON:0002780!9.94e-13!39;UBERON:0001890!9.94e-13!39;UBERON:0006240!9.94e-13!39;UBERON:0000153!1.28e-11!94;UBERON:0007811!2.98e-11!86;UBERON:0002020!1.08e-09!34;UBERON:0000970!7.21e-09!9;UBERON:0000019!7.21e-09!9;UBERON:0000047!7.21e-09!9;UBERON:0004088!7.21e-09!9;UBERON:0002104!7.21e-09!9;UBERON:0001456!7.21e-09!9;UBERON:0003072!7.21e-09!9;UBERON:0003071!7.21e-09!9;UBERON:0004128!7.21e-09!9;UBERON:0001894!2.46e-08!10;UBERON:0006222!2.46e-08!10;UBERON:0000007!5.73e-07!8;UBERON:0003296!5.73e-07!8;UBERON:0010133!5.73e-07!8;UBERON:0002420!7.81e-07!8;UBERON:0007245!7.81e-07!8;UBERON:0010009!7.81e-07!8;UBERON:0010011!7.81e-07!8;UBERON:0000454!7.81e-07!8;UBERON:0002791!9.81e-07!29;UBERON:0003528!9.81e-07!29;UBERON:0001893!9.81e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.06e-18,64;UBERON:0003075,3.06e-18,64;UBERON:0007284,3.06e-18,64;UBERON:0004121,2.01e-17,95;UBERON:0000924,2.01e-17,95;UBERON:0006601,2.01e-17,95;UBERON:0000970,4.38e-16,9;UBERON:0000019,4.38e-16,9;UBERON:0000047,4.38e-16,9;UBERON:0010312,4.38e-16,9;UBERON:0004088,4.38e-16,9;UBERON:0002104,4.38e-16,9;UBERON:0001456,4.38e-16,9;UBERON:0003072,4.38e-16,9;UBERON:0004128,4.38e-16,9;UBERON:0003071,4.38e-16,9;UBERON:0003056,1.29e-15,49;UBERON:0010371,3.35e-15,73;UBERON:0001444,7.09e-13,11;UBERON:0001017,7.72e-12,73;UBERON:0000020,1.13e-11,12;UBERON:0001032,1.13e-11,12;UBERON:0004456,1.13e-11,12;UBERON:0001016,2.27e-11,75;UBERON:0010314,9.35e-11,92;UBERON:0000033,1.18e-10,13;UBERON:0005085,1.18e-10,13;UBERON:0000073,2.25e-10,54;UBERON:0001049,9.68e-10,52;UBERON:0005068,9.68e-10,52;UBERON:0006241,9.68e-10,52;UBERON:0007135,9.68e-10,52;UBERON:0002420,1.57e-09,8;UBERON:0007245,1.57e-09,8;UBERON:0010009,1.57e-09,8;UBERON:0010011,1.57e-09,8;UBERON:0000454,1.57e-09,8;UBERON:0002950,2.40e-09,4;UBERON:0001891,2.40e-09,4;UBERON:0009616,2.40e-09,4;UBERON:0010286,2.40e-09,4;UBERON:0002257,5.05e-08,3;UBERON:0002038,2.02e-07,3;UBERON:0009663,2.02e-07,3;UBERON:0009661,2.02e-07,3;UBERON:0000125,2.02e-07,3;UBERON:0002308,2.02e-07,3;UBERON:0000955,3.61e-07,47;UBERON:0006238,3.61e-07,47;UBERON:0001301,5.43e-07,3;UBERON:0006555,5.43e-07,3;UBERON:0005103,5.43e-07,3;UBERON:0000083,5.43e-07,3;UBERON:0009201,5.43e-07,3;UBERON:0004819,5.43e-07,3;UBERON:0006553,5.43e-07,3;UBERON:0003074,5.43e-07,3;UBERON:0003060,5.43e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,1.43752564364972,0,0,0,0,0,0,2.42779753031517,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0.285650984403804,0.883474163806454,0.122490799214954,0.191690942036473,0,1.10115880999389,0.766124028511126,1.53606533256243,1.31886287730194,1.64677758484337,2.08365348222704,1.67509799400829,2.8138130501584,1.37518422999129,2.35702868378934,2.98980529678116,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,1.9472783122627,0.457500602818626,0.125654352112864,0.695297280769106,1.02286182932132,1.45451631191692,0.811206315338788,1.32391173005411,1.11966273549084,2.77995034277042,0.210441855886474,2.99277018814219,3.21862946206862,2.16074555766419,2.10986744970001,3.06164246180975,3.45907044769094,2.06143794031403,1.03481348295606,0,1.13463648100692,0.351902248327898,0,0.278047249225598,0.696504333044333,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.3377599609307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456994050438915,0,0.203651327845314,0,0.420814919341911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0.35613120733451,0.325773918707152,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,2.38307724027652,1.98067203434441,0.646793418913773,0.857348140126369,1.95074257006501,0.713475270408282,1.15184314421485,0.608929898229199,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0.330916980914195,0,0.129159823477731,0,0.469428954583016,0.5208175393758,0.104859344425711,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0.453142408984205,0,0.415149390336707,2.39414924040619,1.19513524027894,0.729320151204882,0.419226325255965,0,1.11123363900808,0.824140228955577,0.320919209591815,0.505394423527595,1.2673964994512,0.565879024158229,0.842773567228942,0.576226371643824,0.459483751644906,0.952587382566147,0.347652977834566,0.964546102318525,0,0.441596760403192,0,0.70990322463735,1.1921809497366,0,0.470546902076653,0.169229215783353,0.548783918618318,0.789209134313529,0.679020569229309,0.561142271657738,0.593175090620871,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0|short_description=p@chr10:91627519..91627536,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:91627519..91627536,- | |||
|id=chr10:91627519..91627536,- | |||
|ontology_enrichment_celltype=CL:0000117!1.47e-12!23;CL:0000337!1.47e-12!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.00e-13,23;CL:0000337,1.00e-13,23;CL:0000540,1.14e-08,33;CL:0000047,1.14e-08,33;CL:0000031,1.14e-08,33;CL:0000404,1.14e-08,33;CL:0002612,5.05e-08,3;CL:0002614,2.02e-07,3;CL:0002613,3.86e-07,3;CL:0002319,4.54e-07,43;CL:0000393,6.69e-07,39;CL:0000211,6.69e-07,39;CL:0000221,7.70e-07,44;CL:0000133,7.70e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.11e-20!63;UBERON:0003056!1.38e-20!49;UBERON:0002346!1.54e-19!71;UBERON:0003075!1.54e-19!71;UBERON:0007284!1.54e-19!71;UBERON:0001049!1.65e-17!52;UBERON:0005068!1.65e-17!52;UBERON:0006241!1.65e-17!52;UBERON:0007135!1.65e-17!52;UBERON:0001017!4.09e-16!73;UBERON:0005743!4.09e-16!73;UBERON:0000955!4.62e-16!50;UBERON:0006238!4.62e-16!50;UBERON:0002616!2.70e-15!49;UBERON:0000073!3.12e-15!75;UBERON:0001016!3.12e-15!75;UBERON:0004121!5.20e-15!102;UBERON:0000924!5.20e-15!102;UBERON:0006601!5.20e-15!102;UBERON:0003080!1.74e-13!40;UBERON:0002780!9.94e-13!39;UBERON:0001890!9.94e-13!39;UBERON:0006240!9.94e-13!39;UBERON:0000153!1.28e-11!94;UBERON:0007811!2.98e-11!86;UBERON:0002020!1.08e-09!34;UBERON:0000970!7.21e-09!9;UBERON:0000019!7.21e-09!9;UBERON:0000047!7.21e-09!9;UBERON:0004088!7.21e-09!9;UBERON:0002104!7.21e-09!9;UBERON:0001456!7.21e-09!9;UBERON:0003072!7.21e-09!9;UBERON:0003071!7.21e-09!9;UBERON:0004128!7.21e-09!9;UBERON:0001894!2.46e-08!10;UBERON:0006222!2.46e-08!10;UBERON:0000007!5.73e-07!8;UBERON:0003296!5.73e-07!8;UBERON:0010133!5.73e-07!8;UBERON:0002420!7.81e-07!8;UBERON:0007245!7.81e-07!8;UBERON:0010009!7.81e-07!8;UBERON:0010011!7.81e-07!8;UBERON:0000454!7.81e-07!8;UBERON:0002791!9.81e-07!29;UBERON:0003528!9.81e-07!29;UBERON:0001893!9.81e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.06e-18,64;UBERON:0003075,3.06e-18,64;UBERON:0007284,3.06e-18,64;UBERON:0004121,2.01e-17,95;UBERON:0000924,2.01e-17,95;UBERON:0006601,2.01e-17,95;UBERON:0000970,4.38e-16,9;UBERON:0000019,4.38e-16,9;UBERON:0000047,4.38e-16,9;UBERON:0010312,4.38e-16,9;UBERON:0004088,4.38e-16,9;UBERON:0002104,4.38e-16,9;UBERON:0001456,4.38e-16,9;UBERON:0003072,4.38e-16,9;UBERON:0004128,4.38e-16,9;UBERON:0003071,4.38e-16,9;UBERON:0003056,1.29e-15,49;UBERON:0010371,3.35e-15,73;UBERON:0001444,7.09e-13,11;UBERON:0001017,7.72e-12,73;UBERON:0000020,1.13e-11,12;UBERON:0001032,1.13e-11,12;UBERON:0004456,1.13e-11,12;UBERON:0001016,2.27e-11,75;UBERON:0010314,9.35e-11,92;UBERON:0000033,1.18e-10,13;UBERON:0005085,1.18e-10,13;UBERON:0000073,2.25e-10,54;UBERON:0001049,9.68e-10,52;UBERON:0005068,9.68e-10,52;UBERON:0006241,9.68e-10,52;UBERON:0007135,9.68e-10,52;UBERON:0002420,1.57e-09,8;UBERON:0007245,1.57e-09,8;UBERON:0010009,1.57e-09,8;UBERON:0010011,1.57e-09,8;UBERON:0000454,1.57e-09,8;UBERON:0002950,2.40e-09,4;UBERON:0001891,2.40e-09,4;UBERON:0009616,2.40e-09,4;UBERON:0010286,2.40e-09,4;UBERON:0002257,5.05e-08,3;UBERON:0002038,2.02e-07,3;UBERON:0009663,2.02e-07,3;UBERON:0009661,2.02e-07,3;UBERON:0000125,2.02e-07,3;UBERON:0002308,2.02e-07,3;UBERON:0000955,3.61e-07,47;UBERON:0006238,3.61e-07,47;UBERON:0001301,5.43e-07,3;UBERON:0006555,5.43e-07,3;UBERON:0005103,5.43e-07,3;UBERON:0000083,5.43e-07,3;UBERON:0009201,5.43e-07,3;UBERON:0004819,5.43e-07,3;UBERON:0006553,5.43e-07,3;UBERON:0003074,5.43e-07,3;UBERON:0003060,5.43e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,1.43752564364972,0,0,0,0,0,0,2.42779753031517,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0.285650984403804,0.883474163806454,0.122490799214954,0.191690942036473,0,1.10115880999389,0.766124028511126,1.53606533256243,1.31886287730194,1.64677758484337,2.08365348222704,1.67509799400829,2.8138130501584,1.37518422999129,2.35702868378934,2.98980529678116,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,1.9472783122627,0.457500602818626,0.125654352112864,0.695297280769106,1.02286182932132,1.45451631191692,0.811206315338788,1.32391173005411,1.11966273549084,2.77995034277042,0.210441855886474,2.99277018814219,3.21862946206862,2.16074555766419,2.10986744970001,3.06164246180975,3.45907044769094,2.06143794031403,1.03481348295606,0,1.13463648100692,0.351902248327898,0,0.278047249225598,0.696504333044333,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.3377599609307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456994050438915,0,0.203651327845314,0,0.420814919341911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0.35613120733451,0.325773918707152,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,2.38307724027652,1.98067203434441,0.646793418913773,0.857348140126369,1.95074257006501,0.713475270408282,1.15184314421485,0.608929898229199,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0.330916980914195,0,0.129159823477731,0,0.469428954583016,0.5208175393758,0.104859344425711,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0.453142408984205,0,0.415149390336707,2.39414924040619,1.19513524027894,0.729320151204882,0.419226325255965,0,1.11123363900808,0.824140228955577,0.320919209591815,0.505394423527595,1.2673964994512,0.565879024158229,0.842773567228942,0.576226371643824,0.459483751644906,0.952587382566147,0.347652977834566,0.964546102318525,0,0.441596760403192,0,0.70990322463735,1.1921809497366,0,0.470546902076653,0.169229215783353,0.548783918618318,0.789209134313529,0.679020569229309,0.561142271657738,0.593175090620871,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p@chr10:91627519..91627536,- | |||
}} |
Revision as of 17:58, 12 September 2013
Short description: | p@chr10:91627519..91627536, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:91627519..91627536, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.00e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.00e-13 | 23 |
neuron | 1.14e-08 | 33 |
neuronal stem cell | 1.14e-08 | 33 |
neuroblast | 1.14e-08 | 33 |
electrically signaling cell | 1.14e-08 | 33 |
neuron of the ventral spinal cord | 5.05e-08 | 3 |
neuron of the substantia nigra | 2.02e-07 | 3 |
striatum neuron | 3.86e-07 | 3 |
neural cell | 4.54e-07 | 43 |
electrically responsive cell | 6.69e-07 | 39 |
electrically active cell | 6.69e-07 | 39 |
ectodermal cell | 7.70e-07 | 44 |
neurectodermal cell | 7.70e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.