FFCP PHASE1:Mm9::chr2:68699621..68699632,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=241447|HGNC=|UniProt=A2AUS9,Q8C172|association_with_transcript=7bp_to_NM_172856,uc008jxs.1_5end|description=CAGE_peak_2_at_Lass6_5end|id=chr2:68699621..68699632,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,8.87e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!6.06e-10!43;UBERON:0000344!7.74e-08!15;UBERON:0001242!2.14e-07!13;UBERON:0000060!2.14e-07!13;UBERON:0001262!2.14e-07!13;UBERON:0004786!2.14e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.34e-14,31;UBERON:0000344,7.81e-10,15;UBERON:0001242,2.98e-09,13;UBERON:0001262,2.98e-09,13;UBERON:0004786,2.98e-09,13;UBERON:0005409,1.32e-07,47|phase1_expression=1.12104192973356,3.48975407639361,3.18499467572675,7.56160528267075,9.5170188689806,2.01455126294268,3.03696432774183,0.258246646883153,0.281577444303333,0.468129052643987,0,0,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0,0,1.10556277196391,1.48936426801328,4.17919662622297,2.55987876469451,1.14704640533585,1.72269589234506,4.73838195774982,3.01659725760245,6.84084310042946,2.26827116783938,2.21730510655305,0,0,0,2.88851619751275,1.16364251750945,1.22501613757421,1.67412652294763,0.7813353445238,0.523523743973798,0,2.73218193983378,0.485510353031154,3.39921408534059,2.02753862439029,1.28482726513177,0,0.436050312760893,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0.725362142011344,0.336093799142464,6.17422646486273,7.44986943840768,5.15672092277442,0.202316460859598,0.528990979272033,0,0,0,0.899899717281399,0.988866362566974,0,0.299600110518405,0,0.933206510776299,0.405017814995072,0.420649922702764,0,0.441737081903227,0.857435594504678,0.479227355091182,0,0,0.383062014255563,0.153606533256243,0.131886287730194,0,0.52091337055676,0.558365998002762,0.56276261003168,0.61119299110724,0,0.284743361598206,0.186399445825301,1.06016670666458,1.43585964202892,2.02905142091174,0.860423876981386,3.39985666853875,3.77792234146472,8.4470934268197,8.06448396775204,2.10666630197628,3.40860645156115,0.779358013808606,3.18005617059306,0.14084341977668,2.56652954828636,0,0,0.649473123033642,0,0,2.8545969929765,0.517875767294343,0.148442139064825,0.346970653532272,0.304465478312141,1.15307748628029,0.301445281105245,0.940709657085638,0,1.73036477414062,0.722996784599558,0,0.323533699894818,0.220841518460394,0,3.72783522436244,0.878342391034642,1.46612694769419,5.10914110417183,0.11981512450592,0.599902730993408,0.254140454146129,0.748953197024114,1.37250180845588,0.376963056338593,1.04294592115366,0.511430914660661,0.41557608911912,0.486723789203273,1.73126918545538,0.746441823660558,3.53811861807145,0.841767423545896,0.260240885925407,0,0.900310649026746,0.60281927134286,0.680364991513279,0.512454881139399,0.937017245597288,0.776110112217047,0,0,0.351902248327898,0.219195732427575,0.556094498451196,1.39300866608867,0.205782136407943,0.995171334092466,0,1.02939162845886,0,0,1.17263029990548,1.08037236876609,0.473489471170421,0.590292695242212,0.617068451549513,0.930135779001631,1.07309360559848,1.63471479314037,0.16455984991348,0.820837320395476,0.324275238183423,0.438599962275997,0.219550115291051,0.671032093801859,2.73376933133365,1.23485534855141,6.93879444265976,1.85115396664481,0.213288250535234,0.464473343720877,1.03093969057675,0.80673409849337,1.55664630691409,1.52180500890047,2.84717436926707,1.64698954724011,2.26201687920243,1.59165177632921,1.75467678407208,4.49409704327111,1.51296634912286,3.18626037206988,0.758671603812327,1.14248512609729,0,1.62921062276251,0.581857461502877,0.911765658574141,1.07502113111237,2.65698266363284,2.04098346193787,2.22114895059241,5.92905254174298,0.500535317148282,0.196558995113203,0,0,0.72353147925725,1.01850340712568,0.287696137450811,0.810676133875177,0.549122826376163,2.87536413054709,1.48856379067401,2.18426371180192,5.55673531483646,2.87035861635059,2.8946611281802,1.84753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0.704070744865506,1.50755631697634,0.952174563544055,2.34160377429359,1.41871629695572,3.32197034473162,1.75400245523236,1.14704320301017,1.03610989119537,1.59113964439663,0,4.35124547054968,0,0.275936746304732,0.80275294993896,0.586058432961016,1.80328439914343,0.252470927204373,0,0.780877488593277,1.07711698866399,0.238968797952552,0.445597348164788,0.849229592366497,0.809621403349789,1.75353514746787,0.790575555893047,1.60660658210904,1.84522110770749,0.178065603667255,0.977321756121456,0.824850614862677,2.65490276679926,0.728341908464944,1.209294227859,0.188605079755898,0.295301892880773,1.53717573971964,1.03371317267288,0.363533729477506,1.42598951353889,2.21225730555071,2.10837217149998,0,1.36175842301515,0,0.388076051348264,0.428674070063185,0.709360934569094,0.535106452806212,0.987294123612726,0.913394847343798,3.98941903708308,1.0591603543191,1.32317038832977,2.30840754118072,0.968786560175433,0.603129249281559,0.835606408021955,1.31312719796049,3.20628920292836,0.556275906031529,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0.339956859987711,0.419854356970974,0.138199973804424,0,0.474503990371703,0.609958401380546,0.540026704109006,1.25452977608681,0.87345025498471,0.404593039154462,1.07449492442937,0.26175594198403,3.75883422546199,0.621339313086926,0,0.299033092087958,0.66183396182839,1.16670713006429,0.904118764344118,1.01373675294467,0.938857909166032,0.911430693907651,2.20204623293993,0,1.15212002503146,0.316011120628178,0,0.410843828659309,0.129920822977795,0,0.596044064343795,0.360586348559907,0.295379054349154,0.100966449948148,0.15241361331,0.100826185136841,0.194915761479505,0.192423683280659,0.701261413089414,0.453460767230423,0.221985953374065,0.448569283047378,0.503653849092235,1.15913756419314,1.31377732815827,1.09890974560359,0,2.00628841614145,1.12950368523413,1.38097570952153,0.572895513439397,0.68741272937475,2.05524755931193,2.2661816921691,2.70009000092722,1.35096360967266,0.906284817968409,1.55328093525546,0.31136204275253,0.798049746802062,0.853668028770671,0.972426868273176,0.628839487883947,0,0.888986911206461,1.23621034343337,0.962757628775446,1.01078884705519,0.50695859978048,0.943131706930381,0.749132059759059,1.28050304809739,0.918967503289812,1.42888107384922,1.15884325944855,0.964546102318525,1.64834360321323,1.03039244094078,0.685738504770831,0.887379030796687,0.476872379894642,0.290692833264657,1.03520318456864,0.592302255241736,0.182927972872773,0.263069711437843,0.950628796921032,1.12228454331548,1.06771516311757,1.28055827088233,0.409231043169689,0.929621047115796,0.964533054905707,0.999242311751784,1.16965804222704,2.14871054048298,0.956441660344217,0.661774257358546,0.231867835620421|short_description=p2@Lass6}} | ||
|EntrezGene=241447 | |||
|HGNC= | |||
|UniProt=A2AUS9,Q8C172 | |||
|association_with_transcript=7bp_to_NM_172856,uc008jxs.1_5end | |||
|description=CAGE_peak_2_at_Lass6_5end | |||
|id=chr2:68699621..68699632,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.87e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.06e-10!43;UBERON:0000344!7.74e-08!15;UBERON:0001242!2.14e-07!13;UBERON:0000060!2.14e-07!13;UBERON:0001262!2.14e-07!13;UBERON:0004786!2.14e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.34e-14,31;UBERON:0000344,7.81e-10,15;UBERON:0001242,2.98e-09,13;UBERON:0001262,2.98e-09,13;UBERON:0004786,2.98e-09,13;UBERON:0005409,1.32e-07,47 | |||
|phase1_expression=1.12104192973356,3.48975407639361,3.18499467572675,7.56160528267075,9.5170188689806,2.01455126294268,3.03696432774183,0.258246646883153,0.281577444303333,0.468129052643987,0,0,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0,0,1.10556277196391,1.48936426801328,4.17919662622297,2.55987876469451,1.14704640533585,1.72269589234506,4.73838195774982,3.01659725760245,6.84084310042946,2.26827116783938,2.21730510655305,0,0,0,2.88851619751275,1.16364251750945,1.22501613757421,1.67412652294763,0.7813353445238,0.523523743973798,0,2.73218193983378,0.485510353031154,3.39921408534059,2.02753862439029,1.28482726513177,0,0.436050312760893,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0.725362142011344,0.336093799142464,6.17422646486273,7.44986943840768,5.15672092277442,0.202316460859598,0.528990979272033,0,0,0,0.899899717281399,0.988866362566974,0,0.299600110518405,0,0.933206510776299,0.405017814995072,0.420649922702764,0,0.441737081903227,0.857435594504678,0.479227355091182,0,0,0.383062014255563,0.153606533256243,0.131886287730194,0,0.52091337055676,0.558365998002762,0.56276261003168,0.61119299110724,0,0.284743361598206,0.186399445825301,1.06016670666458,1.43585964202892,2.02905142091174,0.860423876981386,3.39985666853875,3.77792234146472,8.4470934268197,8.06448396775204,2.10666630197628,3.40860645156115,0.779358013808606,3.18005617059306,0.14084341977668,2.56652954828636,0,0,0.649473123033642,0,0,2.8545969929765,0.517875767294343,0.148442139064825,0.346970653532272,0.304465478312141,1.15307748628029,0.301445281105245,0.940709657085638,0,1.73036477414062,0.722996784599558,0,0.323533699894818,0.220841518460394,0,3.72783522436244,0.878342391034642,1.46612694769419,5.10914110417183,0.11981512450592,0.599902730993408,0.254140454146129,0.748953197024114,1.37250180845588,0.376963056338593,1.04294592115366,0.511430914660661,0.41557608911912,0.486723789203273,1.73126918545538,0.746441823660558,3.53811861807145,0.841767423545896,0.260240885925407,0,0.900310649026746,0.60281927134286,0.680364991513279,0.512454881139399,0.937017245597288,0.776110112217047,0,0,0.351902248327898,0.219195732427575,0.556094498451196,1.39300866608867,0.205782136407943,0.995171334092466,0,1.02939162845886,0,0,1.17263029990548,1.08037236876609,0.473489471170421,0.590292695242212,0.617068451549513,0.930135779001631,1.07309360559848,1.63471479314037,0.16455984991348,0.820837320395476,0.324275238183423,0.438599962275997,0.219550115291051,0.671032093801859,2.73376933133365,1.23485534855141,6.93879444265976,1.85115396664481,0.213288250535234,0.464473343720877,1.03093969057675,0.80673409849337,1.55664630691409,1.52180500890047,2.84717436926707,1.64698954724011,2.26201687920243,1.59165177632921,1.75467678407208,4.49409704327111,1.51296634912286,3.18626037206988,0.758671603812327,1.14248512609729,0,1.62921062276251,0.581857461502877,0.911765658574141,1.07502113111237,2.65698266363284,2.04098346193787,2.22114895059241,5.92905254174298,0.500535317148282,0.196558995113203,0,0,0.72353147925725,1.01850340712568,0.287696137450811,0.810676133875177,0.549122826376163,2.87536413054709,1.48856379067401,2.18426371180192,5.55673531483646,2.87035861635059,2.8946611281802,1.84753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0.704070744865506,1.50755631697634,0.952174563544055,2.34160377429359,1.41871629695572,3.32197034473162,1.75400245523236,1.14704320301017,1.03610989119537,1.59113964439663,0,4.35124547054968,0,0.275936746304732,0.80275294993896,0.586058432961016,1.80328439914343,0.252470927204373,0,0.780877488593277,1.07711698866399,0.238968797952552,0.445597348164788,0.849229592366497,0.809621403349789,1.75353514746787,0.790575555893047,1.60660658210904,1.84522110770749,0.178065603667255,0.977321756121456,0.824850614862677,2.65490276679926,0.728341908464944,1.209294227859,0.188605079755898,0.295301892880773,1.53717573971964,1.03371317267288,0.363533729477506,1.42598951353889,2.21225730555071,2.10837217149998,0,1.36175842301515,0,0.388076051348264,0.428674070063185,0.709360934569094,0.535106452806212,0.987294123612726,0.913394847343798,3.98941903708308,1.0591603543191,1.32317038832977,2.30840754118072,0.968786560175433,0.603129249281559,0.835606408021955,1.31312719796049,3.20628920292836,0.556275906031529,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0.339956859987711,0.419854356970974,0.138199973804424,0,0.474503990371703,0.609958401380546,0.540026704109006,1.25452977608681,0.87345025498471,0.404593039154462,1.07449492442937,0.26175594198403,3.75883422546199,0.621339313086926,0,0.299033092087958,0.66183396182839,1.16670713006429,0.904118764344118,1.01373675294467,0.938857909166032,0.911430693907651,2.20204623293993,0,1.15212002503146,0.316011120628178,0,0.410843828659309,0.129920822977795,0,0.596044064343795,0.360586348559907,0.295379054349154,0.100966449948148,0.15241361331,0.100826185136841,0.194915761479505,0.192423683280659,0.701261413089414,0.453460767230423,0.221985953374065,0.448569283047378,0.503653849092235,1.15913756419314,1.31377732815827,1.09890974560359,0,2.00628841614145,1.12950368523413,1.38097570952153,0.572895513439397,0.68741272937475,2.05524755931193,2.2661816921691,2.70009000092722,1.35096360967266,0.906284817968409,1.55328093525546,0.31136204275253,0.798049746802062,0.853668028770671,0.972426868273176,0.628839487883947,0,0.888986911206461,1.23621034343337,0.962757628775446,1.01078884705519,0.50695859978048,0.943131706930381,0.749132059759059,1.28050304809739,0.918967503289812,1.42888107384922,1.15884325944855,0.964546102318525,1.64834360321323,1.03039244094078,0.685738504770831,0.887379030796687,0.476872379894642,0.290692833264657,1.03520318456864,0.592302255241736,0.182927972872773,0.263069711437843,0.950628796921032,1.12228454331548,1.06771516311757,1.28055827088233,0.409231043169689,0.929621047115796,0.964533054905707,0.999242311751784,1.16965804222704,2.14871054048298,0.956441660344217,0.661774257358546,0.231867835620421 | |||
|short_description=p2@Lass6 | |||
}} | |||
Revision as of 00:22, 14 September 2013
| Short description: | p2@Lass6 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Lass6_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 7bp_to_NM_172856, uc008jxs.1_5end |
| EntrezGene: | Lass6 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 8.87e-08 | 25 |
| Ontology term | p-value | n |
|---|---|---|
| intestine | 8.34e-14 | 31 |
| mucosa | 7.81e-10 | 15 |
| intestinal mucosa | 2.98e-09 | 13 |
| wall of intestine | 2.98e-09 | 13 |
| gastrointestinal system mucosa | 2.98e-09 | 13 |
| gastrointestinal system | 1.32e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
