FFCP PHASE1:Mm9::chr14:71027250..71027273,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13829|HGNC=|MCL_coexpression_id=20|UniProt=|association_with_transcript=-378bp_to_NM_001252662,NM_001252663_5end|description=CAGE_peak_10_at_Epb4.9_5end|id=chr14:71027250..71027273,-|ontology_enrichment_celltype=CL:0000117!2.08e-19!23;CL:0000337!2.08e-19!23;CL:0000540!4.75e-13!33;CL:0000047!4.75e-13!33;CL:0000031!4.75e-13!33;CL:0000404!4.75e-13!33;CL:0000393!3.76e-10!39;CL:0000211!3.76e-10!39;CL:0002319!1.09e-08!43;CL:0000221!2.28e-08!44;CL:0000133!2.28e-08!44;CL:0000055!9.91e-07!50|ontology_enrichment_celltype_v019_2=CL:0002610,1.70e-10,3;CL:0002614,1.13e-09,3;CL:0000117,4.77e-09,23;CL:0000337,4.77e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.03e-45!52;UBERON:0005068!9.03e-45!52;UBERON:0006241!9.03e-45!52;UBERON:0007135!9.03e-45!52;UBERON:0000955!4.91e-43!50;UBERON:0006238!4.91e-43!50;UBERON:0002616!1.42e-41!49;UBERON:0001017!2.50e-39!73;UBERON:0005743!2.50e-39!73;UBERON:0000073!6.73e-38!75;UBERON:0001016!6.73e-38!75;UBERON:0000033!1.18e-36!63;UBERON:0003080!1.33e-33!40;UBERON:0002020!1.59e-33!34;UBERON:0002346!1.96e-32!71;UBERON:0003075!1.96e-32!71;UBERON:0007284!1.96e-32!71;UBERON:0002780!4.91e-32!39;UBERON:0001890!4.91e-32!39;UBERON:0006240!4.91e-32!39;UBERON:0003056!6.32e-29!49;UBERON:0002791!1.29e-27!29;UBERON:0003528!1.29e-27!29;UBERON:0001893!1.29e-27!29;UBERON:0004121!1.36e-26!102;UBERON:0000924!1.36e-26!102;UBERON:0006601!1.36e-26!102;UBERON:0007811!1.16e-24!86;UBERON:0000153!1.93e-21!94;UBERON:0000956!3.85e-18!21;UBERON:0001869!3.85e-18!21;UBERON:0000203!3.85e-18!21;UBERON:0002619!1.96e-16!17;UBERON:0002021!2.39e-14!10;UBERON:0000411!2.39e-14!10;UBERON:0001950!2.39e-14!10;UBERON:0000025!1.71e-13!114;UBERON:0004111!1.43e-12!122;UBERON:0003076!7.28e-11!12;UBERON:0003057!7.28e-11!12;UBERON:0002420!1.19e-10!8;UBERON:0007245!1.19e-10!8;UBERON:0010009!1.19e-10!8;UBERON:0010011!1.19e-10!8;UBERON:0000454!1.19e-10!8;UBERON:0002298!4.70e-10!6;UBERON:0002240!1.92e-08!6;UBERON:0005174!1.92e-08!6;UBERON:0001137!1.92e-08!6;UBERON:0000477!4.32e-08!154;UBERON:0000064!5.54e-08!99;UBERON:0000475!8.68e-08!200;UBERON:0002950!4.69e-07!4;UBERON:0001891!4.69e-07!4;UBERON:0009616!4.69e-07!4;UBERON:0001948!5.84e-07!5;UBERON:0002315!5.84e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.03e-36,54;UBERON:0001049,1.13e-31,52;UBERON:0005068,1.13e-31,52;UBERON:0006241,1.13e-31,52;UBERON:0007135,1.13e-31,52;UBERON:0001017,2.83e-30,73;UBERON:0001016,2.48e-29,75;UBERON:0002021,9.96e-28,10;UBERON:0000411,9.96e-28,10;UBERON:0001950,9.96e-28,10;UBERON:0000955,3.80e-27,47;UBERON:0006238,3.80e-27,47;UBERON:0002020,3.85e-27,34;UBERON:0002616,4.04e-25,46;UBERON:0002346,7.95e-25,64;UBERON:0003075,7.95e-25,64;UBERON:0007284,7.95e-25,64;UBERON:0003080,2.09e-23,40;UBERON:0003528,5.86e-23,29;UBERON:0002791,5.86e-23,29;UBERON:0001893,5.86e-23,29;UBERON:0004121,4.50e-22,95;UBERON:0000924,4.50e-22,95;UBERON:0006601,4.50e-22,95;UBERON:0002780,3.25e-21,39;UBERON:0001890,3.25e-21,39;UBERON:0006240,3.25e-21,39;UBERON:0010371,3.66e-21,73;UBERON:0002619,6.27e-19,17;UBERON:0003056,2.25e-18,49;UBERON:0000956,7.88e-18,21;UBERON:0001869,7.88e-18,21;UBERON:0000203,7.88e-18,21;UBERON:0010314,8.99e-16,92;UBERON:0002950,8.40e-13,4;UBERON:0001891,8.40e-13,4;UBERON:0009616,8.40e-13,4;UBERON:0010286,8.40e-13,4;UBERON:0000025,9.12e-12,114;UBERON:0004111,1.15e-10,122;UBERON:0004684,1.70e-10,3;UBERON:0002275,1.70e-10,3;UBERON:0002038,1.13e-09,3;UBERON:0009663,1.13e-09,3;UBERON:0009661,1.13e-09,3;UBERON:0000125,1.13e-09,3;UBERON:0002308,1.13e-09,3;UBERON:0003076,1.52e-08,12;UBERON:0003057,1.52e-08,12;UBERON:0011216,4.57e-08,194;UBERON:0002240,9.10e-08,6;UBERON:0005174,9.10e-08,6;UBERON:0001137,9.10e-08,6;UBERON:0001896,9.26e-08,2;UBERON:0002298,9.26e-08,2;UBERON:0005290,9.26e-08,2;UBERON:0010096,9.26e-08,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0.571301968807607,1.76694832761291,0.244981598429908,0.0958454710182364,0.919218786610021,7.70811166995721,4.59674417106676,5.22262213071228,0.131886287730194,0.823388792421687,0.52091337055676,4.4669279840221,2.25105044012672,4.43114918552749,1.47314292736834,1.13897344639282,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,9.58660092190865,5.03250663100489,0.502617408451458,2.9550134432687,2.04572365864264,5.81806524766768,4.2182728397617,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,0.308713837137853,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.47248480927973,7.3843362553088,0,0,0,0,0,0,0,0,0,0,0,3.85585579706168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,9.08583979851498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295379054349154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,3.68260189205742,4.01026859407578,3.09335728218638,2.74033007908257,3.0215755895588,4.05013500139084,1.80128481289688,3.17199686288943,4.65984280576638,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.282328141245992,0,0.365855945745545,0,0,0,0.118635018124174,0,0,0,0,0.499621155875892,0,0.214871054048298,0,0,0|short_description=p10@Epb4.9}} | ||
|EntrezGene=13829 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt= | |||
|association_with_transcript=-378bp_to_NM_001252662,NM_001252663_5end | |||
|description=CAGE_peak_10_at_Epb4.9_5end | |||
|id=chr14:71027250..71027273,- | |||
|ontology_enrichment_celltype=CL:0000117!2.08e-19!23;CL:0000337!2.08e-19!23;CL:0000540!4.75e-13!33;CL:0000047!4.75e-13!33;CL:0000031!4.75e-13!33;CL:0000404!4.75e-13!33;CL:0000393!3.76e-10!39;CL:0000211!3.76e-10!39;CL:0002319!1.09e-08!43;CL:0000221!2.28e-08!44;CL:0000133!2.28e-08!44;CL:0000055!9.91e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.70e-10,3;CL:0002614,1.13e-09,3;CL:0000117,4.77e-09,23;CL:0000337,4.77e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.03e-45!52;UBERON:0005068!9.03e-45!52;UBERON:0006241!9.03e-45!52;UBERON:0007135!9.03e-45!52;UBERON:0000955!4.91e-43!50;UBERON:0006238!4.91e-43!50;UBERON:0002616!1.42e-41!49;UBERON:0001017!2.50e-39!73;UBERON:0005743!2.50e-39!73;UBERON:0000073!6.73e-38!75;UBERON:0001016!6.73e-38!75;UBERON:0000033!1.18e-36!63;UBERON:0003080!1.33e-33!40;UBERON:0002020!1.59e-33!34;UBERON:0002346!1.96e-32!71;UBERON:0003075!1.96e-32!71;UBERON:0007284!1.96e-32!71;UBERON:0002780!4.91e-32!39;UBERON:0001890!4.91e-32!39;UBERON:0006240!4.91e-32!39;UBERON:0003056!6.32e-29!49;UBERON:0002791!1.29e-27!29;UBERON:0003528!1.29e-27!29;UBERON:0001893!1.29e-27!29;UBERON:0004121!1.36e-26!102;UBERON:0000924!1.36e-26!102;UBERON:0006601!1.36e-26!102;UBERON:0007811!1.16e-24!86;UBERON:0000153!1.93e-21!94;UBERON:0000956!3.85e-18!21;UBERON:0001869!3.85e-18!21;UBERON:0000203!3.85e-18!21;UBERON:0002619!1.96e-16!17;UBERON:0002021!2.39e-14!10;UBERON:0000411!2.39e-14!10;UBERON:0001950!2.39e-14!10;UBERON:0000025!1.71e-13!114;UBERON:0004111!1.43e-12!122;UBERON:0003076!7.28e-11!12;UBERON:0003057!7.28e-11!12;UBERON:0002420!1.19e-10!8;UBERON:0007245!1.19e-10!8;UBERON:0010009!1.19e-10!8;UBERON:0010011!1.19e-10!8;UBERON:0000454!1.19e-10!8;UBERON:0002298!4.70e-10!6;UBERON:0002240!1.92e-08!6;UBERON:0005174!1.92e-08!6;UBERON:0001137!1.92e-08!6;UBERON:0000477!4.32e-08!154;UBERON:0000064!5.54e-08!99;UBERON:0000475!8.68e-08!200;UBERON:0002950!4.69e-07!4;UBERON:0001891!4.69e-07!4;UBERON:0009616!4.69e-07!4;UBERON:0001948!5.84e-07!5;UBERON:0002315!5.84e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.03e-36,54;UBERON:0001049,1.13e-31,52;UBERON:0005068,1.13e-31,52;UBERON:0006241,1.13e-31,52;UBERON:0007135,1.13e-31,52;UBERON:0001017,2.83e-30,73;UBERON:0001016,2.48e-29,75;UBERON:0002021,9.96e-28,10;UBERON:0000411,9.96e-28,10;UBERON:0001950,9.96e-28,10;UBERON:0000955,3.80e-27,47;UBERON:0006238,3.80e-27,47;UBERON:0002020,3.85e-27,34;UBERON:0002616,4.04e-25,46;UBERON:0002346,7.95e-25,64;UBERON:0003075,7.95e-25,64;UBERON:0007284,7.95e-25,64;UBERON:0003080,2.09e-23,40;UBERON:0003528,5.86e-23,29;UBERON:0002791,5.86e-23,29;UBERON:0001893,5.86e-23,29;UBERON:0004121,4.50e-22,95;UBERON:0000924,4.50e-22,95;UBERON:0006601,4.50e-22,95;UBERON:0002780,3.25e-21,39;UBERON:0001890,3.25e-21,39;UBERON:0006240,3.25e-21,39;UBERON:0010371,3.66e-21,73;UBERON:0002619,6.27e-19,17;UBERON:0003056,2.25e-18,49;UBERON:0000956,7.88e-18,21;UBERON:0001869,7.88e-18,21;UBERON:0000203,7.88e-18,21;UBERON:0010314,8.99e-16,92;UBERON:0002950,8.40e-13,4;UBERON:0001891,8.40e-13,4;UBERON:0009616,8.40e-13,4;UBERON:0010286,8.40e-13,4;UBERON:0000025,9.12e-12,114;UBERON:0004111,1.15e-10,122;UBERON:0004684,1.70e-10,3;UBERON:0002275,1.70e-10,3;UBERON:0002038,1.13e-09,3;UBERON:0009663,1.13e-09,3;UBERON:0009661,1.13e-09,3;UBERON:0000125,1.13e-09,3;UBERON:0002308,1.13e-09,3;UBERON:0003076,1.52e-08,12;UBERON:0003057,1.52e-08,12;UBERON:0011216,4.57e-08,194;UBERON:0002240,9.10e-08,6;UBERON:0005174,9.10e-08,6;UBERON:0001137,9.10e-08,6;UBERON:0001896,9.26e-08,2;UBERON:0002298,9.26e-08,2;UBERON:0005290,9.26e-08,2;UBERON:0010096,9.26e-08,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0.571301968807607,1.76694832761291,0.244981598429908,0.0958454710182364,0.919218786610021,7.70811166995721,4.59674417106676,5.22262213071228,0.131886287730194,0.823388792421687,0.52091337055676,4.4669279840221,2.25105044012672,4.43114918552749,1.47314292736834,1.13897344639282,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,9.58660092190865,5.03250663100489,0.502617408451458,2.9550134432687,2.04572365864264,5.81806524766768,4.2182728397617,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,0.308713837137853,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.47248480927973,7.3843362553088,0,0,0,0,0,0,0,0,0,0,0,3.85585579706168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,9.08583979851498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295379054349154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,3.68260189205742,4.01026859407578,3.09335728218638,2.74033007908257,3.0215755895588,4.05013500139084,1.80128481289688,3.17199686288943,4.65984280576638,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.282328141245992,0,0.365855945745545,0,0,0,0.118635018124174,0,0,0,0,0.499621155875892,0,0.214871054048298,0,0,0 | |||
|short_description=p10@Epb4.9 | |||
}} |
Revision as of 03:02, 13 September 2013
Short description: | p10@Epb4.9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Epb4.9_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -378bp_to_NM_001252662, NM_001252663_5end |
EntrezGene: | Epb4.9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.70e-10 | 3 |
neuron of the substantia nigra | 1.13e-09 | 3 |
CNS neuron (sensu Vertebrata) | 4.77e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.77e-09 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.