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FFCP PHASE1:Mm9::chr9:92145033..92145112,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=22038|HGNC=|MCL_coexpression_id=533|UniProt=Q9JJ00|association_with_transcript=1bp_to_NM_011636,uc009ram.2_5end|description=CAGE_peak_1_at_Plscr1_5end|id=chr9:92145033..92145112,+|ontology_enrichment_celltype=CL:0000066!4.72e-08!25;CL:0000223!8.46e-08!20;CL:0002076!9.13e-07!15|ontology_enrichment_celltype_v019_2=CL:0000066,4.72e-08,25;CL:0000223,8.46e-08,20;CL:0002076,9.13e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!1.44e-11!128;UBERON:0001555!1.44e-11!128;UBERON:0007026!1.44e-11!128;UBERON:0004119!1.50e-11!130;UBERON:0000925!1.50e-11!130;UBERON:0006595!1.50e-11!130;UBERON:0004921!1.01e-10!126;UBERON:0004185!1.01e-10!126;UBERON:0005409!1.07e-09!59;UBERON:0000160!2.96e-09!43;UBERON:0000344!1.90e-08!15;UBERON:0001242!2.08e-07!13;UBERON:0000060!2.08e-07!13;UBERON:0001262!2.08e-07!13;UBERON:0004786!2.08e-07!13;UBERON:0009569!3.21e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.91e-14,31;UBERON:0001007,1.52e-13,116;UBERON:0001555,1.52e-13,116;UBERON:0007026,1.52e-13,116;UBERON:0004119,1.69e-13,118;UBERON:0000925,1.69e-13,118;UBERON:0006595,1.69e-13,118;UBERON:0005409,2.37e-13,47;UBERON:0004921,1.26e-12,114;UBERON:0002100,5.77e-09,90;UBERON:0000344,1.90e-08,15;UBERON:0001242,2.08e-07,13;UBERON:0001262,2.08e-07,13;UBERON:0004786,2.08e-07,13;UBERON:0009569,3.21e-07,66;UBERON:0003104,4.94e-07,61;UBERON:0009142,4.94e-07,61|phase1_expression=4.16387002472464,91.780532209152,107.379820495931,50.8139874995474,58.1039046737763,73.1953625535839,67.5140531321069,8.26389270026088,5.63154888606667,6.55380673701582,9.58820622062828,13.5612670292072,0.513602189793617,0.0874204024189974,11.9919514253639,11.1361397064404,8.39474253753776,3.62781490161973,4.2505474417779,7.63901373236454,19.3898701544439,3.47518329203099,7.05239430675126,56.1573404004857,73.1815606604272,110.826769074199,131.813170824677,89.6360327973298,245.890304776548,88.9666358052555,149.668094692331,0,0,0,25.1300909183609,26.0988393212833,26.1336776015832,204.243435799611,189.08315337476,184.280357878777,113.528677189986,162.56482542011,118.464526139601,68.6137657966896,60.9275356629282,46.2537815447438,57.1145681374069,10.9012578190223,10.9843091367236,8.36048566019419,27.7173114818218,15.8127820801469,7.55021727259814,2.17608642603403,0.672187598284928,33.4437266846731,30.0860111935695,35.5813743671435,4.24864567805155,2.64495489636016,6.33831403506179,30.4960078862219,32.014612660001,35.0960889739746,36.5880554149781,33.3925654024667,21.2716078468067,14.6002956022191,1.55534418462716,2.70011876663381,1.26194976810829,4.85606673486466,5.74258206474195,0.979926393719632,1.62937300731002,1.83843757322004,2.20231761998777,2.68143409978894,2.4577045320999,3.03338461779446,3.93396867490361,3.64639359389732,5.02529398202486,5.6276261003168,5.34793867218835,6.48182888042069,6.40672563595963,3.16879057903011,12.7977266733081,12.9227367782603,57.6830332516339,37.858650587181,251.589393471868,8.09554787456726,24.6915038630114,26.8816132258401,13.2017754923847,11.930122580464,15.3273742715693,15.1936017039446,7.18301440861071,37.2146784501522,20.3844191765317,7.11066703153331,111.276395079764,133.267289239902,126.886635698711,29.1168893283603,13.9826457169473,8.60964406575984,6.93941307064543,9.43842982767638,7.84092690670599,8.74191315205211,9.28950786372068,9.29932775839599,45.2366790953904,5.35017620603673,22.9998743506967,5.3383060482645,5.52103796150984,4.84875253135222,149.113408974498,7.61230072230023,3.77004072264219,48.792297544841,27.9169240098794,16.197373736822,28.3366606372934,3.59497534571574,4.57500602818627,0.879580464790051,2.08589184230732,1.27857728665165,3.53239675751252,1.62241263067758,11.7115268427864,9.57933673697716,5.05445516867349,5.47148825304832,10.4096354370163,8.96618207290544,6.30217454318722,5.87748789559289,6.5995404176788,6.66191345481219,5.43470002446427,7.24369438069244,7.54487975264948,8.88798576788751,5.27853372491847,7.23345917010997,3.61461423993277,5.92028683087683,5.96768195583036,9.95171334092466,11.937624184325,19.5584409407184,18.4706274607135,12.0132948070591,12.4298811789981,8.64297895012871,8.28606574548236,9.83821158737019,8.63895832169318,8.37122201101468,8.85302224618743,11.4430035519826,8.72167204541446,9.68588038066662,9.72825714550269,12.5731989185786,11.6361561104257,11.4075455946316,2.3131894342054,1.3377599609307,35.6852285622502,57.6502235326527,8.53153002140936,13.7019636397659,24.6136851125198,45.9838436141221,60.2644498819599,58.3992672165557,44.6057317851841,86.9610480942777,50.0157065512536,49.3412050662054,42.3072069048491,54.8279839279075,48.6310612218062,59.7423819763102,26.1741703315253,19.8792411940928,21.4144697778853,20.5687841123767,30.8384454596525,29.1063652544822,34.7168588812172,36.7549268469209,34.8537175807852,26.5303902431871,15.1190839814446,7.17433954579204,10.0245087507734,12.1425540687821,11.7658870405332,12.5412123071257,18.3330613282622,24.1664755458681,17.9970101720289,33.2219309957579,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|EntrezGene=22038
|HGNC=
|MCL_coexpression_id=533
|UniProt=Q9JJ00
|association_with_transcript=1bp_to_NM_011636,uc009ram.2_5end
|description=CAGE_peak_1_at_Plscr1_5end
|id=chr9:92145033..92145112,+
|ontology_enrichment_celltype=CL:0000066!4.72e-08!25;CL:0000223!8.46e-08!20;CL:0002076!9.13e-07!15
|ontology_enrichment_celltype_v019_2=CL:0000066,4.72e-08,25;CL:0000223,8.46e-08,20;CL:0002076,9.13e-07,15
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!1.44e-11!128;UBERON:0001555!1.44e-11!128;UBERON:0007026!1.44e-11!128;UBERON:0004119!1.50e-11!130;UBERON:0000925!1.50e-11!130;UBERON:0006595!1.50e-11!130;UBERON:0004921!1.01e-10!126;UBERON:0004185!1.01e-10!126;UBERON:0005409!1.07e-09!59;UBERON:0000160!2.96e-09!43;UBERON:0000344!1.90e-08!15;UBERON:0001242!2.08e-07!13;UBERON:0000060!2.08e-07!13;UBERON:0001262!2.08e-07!13;UBERON:0004786!2.08e-07!13;UBERON:0009569!3.21e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.91e-14,31;UBERON:0001007,1.52e-13,116;UBERON:0001555,1.52e-13,116;UBERON:0007026,1.52e-13,116;UBERON:0004119,1.69e-13,118;UBERON:0000925,1.69e-13,118;UBERON:0006595,1.69e-13,118;UBERON:0005409,2.37e-13,47;UBERON:0004921,1.26e-12,114;UBERON:0002100,5.77e-09,90;UBERON:0000344,1.90e-08,15;UBERON:0001242,2.08e-07,13;UBERON:0001262,2.08e-07,13;UBERON:0004786,2.08e-07,13;UBERON:0009569,3.21e-07,66;UBERON:0003104,4.94e-07,61;UBERON:0009142,4.94e-07,61
|phase1_expression=4.16387002472464,91.780532209152,107.379820495931,50.8139874995474,58.1039046737763,73.1953625535839,67.5140531321069,8.26389270026088,5.63154888606667,6.55380673701582,9.58820622062828,13.5612670292072,0.513602189793617,0.0874204024189974,11.9919514253639,11.1361397064404,8.39474253753776,3.62781490161973,4.2505474417779,7.63901373236454,19.3898701544439,3.47518329203099,7.05239430675126,56.1573404004857,73.1815606604272,110.826769074199,131.813170824677,89.6360327973298,245.890304776548,88.9666358052555,149.668094692331,0,0,0,25.1300909183609,26.0988393212833,26.1336776015832,204.243435799611,189.08315337476,184.280357878777,113.528677189986,162.56482542011,118.464526139601,68.6137657966896,60.9275356629282,46.2537815447438,57.1145681374069,10.9012578190223,10.9843091367236,8.36048566019419,27.7173114818218,15.8127820801469,7.55021727259814,2.17608642603403,0.672187598284928,33.4437266846731,30.0860111935695,35.5813743671435,4.24864567805155,2.64495489636016,6.33831403506179,30.4960078862219,32.014612660001,35.0960889739746,36.5880554149781,33.3925654024667,21.2716078468067,14.6002956022191,1.55534418462716,2.70011876663381,1.26194976810829,4.85606673486466,5.74258206474195,0.979926393719632,1.62937300731002,1.83843757322004,2.20231761998777,2.68143409978894,2.4577045320999,3.03338461779446,3.93396867490361,3.64639359389732,5.02529398202486,5.6276261003168,5.34793867218835,6.48182888042069,6.40672563595963,3.16879057903011,12.7977266733081,12.9227367782603,57.6830332516339,37.858650587181,251.589393471868,8.09554787456726,24.6915038630114,26.8816132258401,13.2017754923847,11.930122580464,15.3273742715693,15.1936017039446,7.18301440861071,37.2146784501522,20.3844191765317,7.11066703153331,111.276395079764,133.267289239902,126.886635698711,29.1168893283603,13.9826457169473,8.60964406575984,6.93941307064543,9.43842982767638,7.84092690670599,8.74191315205211,9.28950786372068,9.29932775839599,45.2366790953904,5.35017620603673,22.9998743506967,5.3383060482645,5.52103796150984,4.84875253135222,149.113408974498,7.61230072230023,3.77004072264219,48.792297544841,27.9169240098794,16.197373736822,28.3366606372934,3.59497534571574,4.57500602818627,0.879580464790051,2.08589184230732,1.27857728665165,3.53239675751252,1.62241263067758,11.7115268427864,9.57933673697716,5.05445516867349,5.47148825304832,10.4096354370163,8.96618207290544,6.30217454318722,5.87748789559289,6.5995404176788,6.66191345481219,5.43470002446427,7.24369438069244,7.54487975264948,8.88798576788751,5.27853372491847,7.23345917010997,3.61461423993277,5.92028683087683,5.96768195583036,9.95171334092466,11.937624184325,19.5584409407184,18.4706274607135,12.0132948070591,12.4298811789981,8.64297895012871,8.28606574548236,9.83821158737019,8.63895832169318,8.37122201101468,8.85302224618743,11.4430035519826,8.72167204541446,9.68588038066662,9.72825714550269,12.5731989185786,11.6361561104257,11.4075455946316,2.3131894342054,1.3377599609307,35.6852285622502,57.6502235326527,8.53153002140936,13.7019636397659,24.6136851125198,45.9838436141221,60.2644498819599,58.3992672165557,44.6057317851841,86.9610480942777,50.0157065512536,49.3412050662054,42.3072069048491,54.8279839279075,48.6310612218062,59.7423819763102,26.1741703315253,19.8792411940928,21.4144697778853,20.5687841123767,30.8384454596525,29.1063652544822,34.7168588812172,36.7549268469209,34.8537175807852,26.5303902431871,15.1190839814446,7.17433954579204,10.0245087507734,12.1425540687821,11.7658870405332,12.5412123071257,18.3330613282622,24.1664755458681,17.9970101720289,33.2219309957579,61.8203288067625,32.0041214994913,35.2602570619453,27.025939940341,27.6272016823745,9.64887042726734,49.8833613449833,12.885416000393,7.65935389277522,6.95954851678271,10.5610611729826,9.21284415929987,11.6641384034147,17.3668946593441,18.7585821486367,21.7035395855799,19.6129365448709,48.3396778411427,41.0990256840832,43.250068515872,30.1582567878545,38.6173035511284,35.4070276573706,29.5252318546064,3.85321415970701,2.22702204525186,3.60656879828686,2.27223834483936,11.6738041184015,14.8366722832723,7.75524231838076,16.010909462821,11.5855310522845,11.6061377623421,14.1683745586213,15.1973046113882,10.2774822266096,2.57057053137446,16.0392296285344,9.43747699436453,10.9134262766896,24.9104885688529,3.98235415019888,11.4106898992841,11.1859716076958,10.3732793865744,7.08724542913855,7.07100840271033,19.898978573953,8.72480950746013,9.9819265947722,2.84433082142234,5.27093042874994,7.21948802737308,12.9367050186439,12.2441543941291,10.4780533864031,6.85878512101095,6.7389288784064,9.98865378571595,8.55654907131029,6.69822888052118,16.4270195644597,7.41412248023371,49.1778327662565,3.13283880588812,4.19807509409354,3.98065304525829,2.26807453605959,1.80554989719567,43.1391638212179,3.15223013417866,15.8909919142003,5.98521917093345,9.07453184111587,13.3741604473331,8.47504211870356,7.77845788902177,50.483593708175,37.0871348657694,39.2487925604564,25.7761066864081,15.6586316822662,8.74273708645449,17.8208812355972,16.7270636811575,20.9628061196331,14.5653494095606,14.5470082076591,12.3025292732494,115.227711256404,9.94142900939081,2.25477175473676,8.37292657846281,7.94200754194069,6.02798683866548,7.36210993823067,7.09615727061268,6.10257640957921,8.33308063001281,5.13810787685983,2.17425708743405,1.72818003754719,5.05617793005085,12.3662381327,10.2710957164827,7.01572444080093,5.90788095702689,6.75516606256301,4.08664528367894,4.28299628806274,5.95702054694071,3.73413352609499,4.7388307014315,5.75001496364539,4.9068039236568,4.20756847853648,8.38902419376282,4.43971906748129,2.24284641523689,3.18980771091749,8.88672132548076,32.2813857776033,59.8905811353957,19.0787857380369,14.5455910170255,1.12950368523413,1.38097570952153,0.572895513439397,0.68741272937475,0.685082519770642,1.5107877947794,1.35004500046361,0.45032120322422,0,2.5888015587591,10.586309453586,11.5717213286299,8.19521307619844,9.48116196566347,7.54607385460736,8.82448840560068,9.55660929546946,7.2112270033613,7.38114182061175,6.57012750585873,7.09742039692671,7.35642731405697,10.9560563739762,8.25924466022814,7.23686908840727,10.0021675169445,6.83717523074647,5.98018583437486,7.00546031365621,8.24313952752625,9.60033906679163,8.16388708332953,8.34526664815623,7.99405291477807,7.9992973353031,7.44608549446753,7.50004688778368,9.99664903463803,10.0495044245938,8.97827634652382,7.3553711236988,7.38783617816726,11.867700251921,7.59190521811233,11.5743966588685,5.24602213669686,11.2287172053796,13.9666185131394,5.7386499620653,7.0589254118245,5.56482805489012
|short_description=p1@Plscr1
}}

Revision as of 18:59, 14 September 2013

Short description:p1@Plscr1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Plscr1_5end
Coexpression cluster:MCL_coexpression_mm9:533
Association with transcript: 1bp_to_NM_011636, uc009ram.2_5end
EntrezGene:Plscr1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Plscr1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I591.78
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6107.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I350.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I458.10
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I773.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I867.51
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.63
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.59
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F113.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.14
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.25
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.05
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D156.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D273.18
GP2+ M cell, pool1.CNhs13228.11845-124H9110.83
GP2+ M cell, pool2.CNhs13231.11846-124I1131.81
GP2+ M cell, pool3.CNhs13240.11847-124I289.64
Ileum epithelium, pool1.CNhs13199.10252-104B9245.89
Ileum epithelium, pool2.CNhs13232.10253-104C188.97
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8149.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F525.13
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F626.10
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F726.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8204.24
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1189.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3184.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9113.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2162.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4118.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D868.61
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D960.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B346.25
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B757.11
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.90
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C427.72
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.55
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C133.44
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E130.09
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C535.58
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C630.50
Mouse Meningeal cells, donor3.CNhs12109.11639-122D132.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C735.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E736.59
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D233.39
Mouse Microglia, donor1.CNhs12629.11718-123C821.27
Mouse Microglia, donor2.CNhs12634.11736-123E814.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D912.80
Mouse Schwann, donor2.CNhs12573.11746-123F912.92
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G357.68
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F737.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C4251.59
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F424.69
Mouse hepatocyte, donor8.CNhs13091.11824-124F626.88
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E315.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I815.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.18
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H137.21
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1111.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2133.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3126.89
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B629.12
accessory axillary lymph node, adult.CNhs10475.1063-29H913.98
adrenal gland, adult.CNhs10508.49-24D78.61
adrenal gland, embryo E14.CNhs11038.406-44C56.94
adrenal gland, embryo E16.CNhs11004.1254-43D69.44
adrenal gland, embryo E17.CNhs11043.1263-45I17.84
adrenal gland, embryo E18.CNhs11026.1262-18F58.74
adrenal gland, neonate N00.CNhs11191.1311-23C19.29
adrenal gland, neonate N25.CNhs11223.1377-27I39.30
amnion, adult pregnant day17.5.CNhs10488.583-22A845.24
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G223.00
bone (os femoris), neonate N02.CNhs11227.1985-43F55.34
bone (os femoris), neonate N16.CNhs11225.1525-43A65.52
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H4149.11
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H748.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C727.92
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D116.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D428.34
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.58
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G45.47
eyeball, embryo E12.CNhs11016.345-16C610.41
eyeball, embryo E14.CNhs10521.399-16E28.97
eyeball, embryo E15.CNhs10593.426-16C96.30
eyeball, embryo E17.CNhs11023.1261-18D45.88
eyeball, neonate N00.CNhs11207.633-15C66.60
eyeball, neonate N01.CNhs11140.1532-43E76.66
eyeball, neonate N02.CNhs11205.1551-44G85.43
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E27.54
forelimb, embryo E12.CNhs10600.359-14H28.89
forelimb, embryo E13.CNhs10589.384-1E25.28
forelimb, embryo E14.CNhs10577.413-26A87.23
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B55.97
gonad, embryo E13.CNhs11044.1564-45I69.95
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D219.56
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D518.47
heart, embryo E11.CNhs10586.331-24E912.01
heart, embryo E12.CNhs11015.353-12F512.43
heart, embryo E13.CNhs11013.376-3I98.64
heart, embryo E14.CNhs10597.403-26D48.29
heart, embryo E15.CNhs11017.431-16C89.84
heart, embryo E16.CNhs11021.457-17C68.64
heart, embryo E17.CNhs11025.479-18E58.37
heart, embryo E18.CNhs11030.1283-20G38.85
heart, neonate N00.CNhs11213.639-21E311.44
heart, neonate N03.CNhs11221.1349-25I28.72
heart, neonate N10.CNhs11118.749-24G19.69
heart, neonate N16.CNhs11209.782-15G19.73
heart, neonate N20.CNhs11127.821-26I612.57
heart, neonate N25.CNhs11196.1351-25D311.64
heart, neonate N30.CNhs11202.1390-42D211.41
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I335.69
intestine, adult.CNhs10496.178-9A357.65
intestine, embryo E12.CNhs11019.1251-16I58.53
intestine, embryo E13.CNhs11010.381-16D513.70
intestine, embryo E15.CNhs10602.976-16D824.61
intestine, embryo E16.CNhs10585.463-22H445.98
intestine, embryo E17.CNhs10582.482-18D360.26
intestine, embryo E18.CNhs10526.1289-20F758.40
intestine, neonate N00.CNhs11126.644-26D144.61
intestine, neonate N01.CNhs11192.1322-23E986.96
intestine, neonate N06.CNhs11102.688-20B850.02
intestine, neonate N07.CNhs11095.720-20F249.34
intestine, neonate N10.CNhs11098.755-23A542.31
intestine, neonate N20.CNhs11187.827-18D154.83
intestine, neonate N25.CNhs11121.1352-25E348.63
intestine, neonate N30.CNhs11131.1384-42G159.74
kidney, embryo E14.CNhs10606.411-4I926.17
kidney, embryo E15.CNhs10997.434-16F819.88
kidney, embryo E16.CNhs10584.464-22A521.41
kidney, embryo E17.CNhs11028.483-18I220.57
kidney, embryo E18.CNhs11001.1288-20C730.84
kidney, neonate N00.CNhs11214.646-21G729.11
kidney, neonate N10.CNhs11206.758-6D534.72
kidney, neonate N20.CNhs11113.832-19I136.75
kidney, neonate N25.CNhs11122.1353-25F334.85
kidney, neonate N30.CNhs11203.1385-42H126.53
liver, adult pregnant day01.CNhs10466.508-5B215.12
liver, embryo E12.CNhs10601.355-15F87.17
liver, embryo E13.CNhs10524.378-3H610.02
liver, embryo E14.CNhs10594.409-16E112.14
liver, embryo E15.CNhs10520.433-16D711.77
liver, embryo E16.CNhs10523.462-17F512.54
liver, embryo E17.CNhs10510.481-18A318.33
liver, embryo E18.CNhs10579.499-43G424.17
liver, neonate N00.CNhs11117.641-24F418.00
liver, neonate N03.CNhs11123.1345-25G233.22
liver, neonate N06.CNhs11101.684-20A861.82
liver, neonate N07.CNhs11103.716-20H232.00
liver, neonate N10.CNhs11115.751-24B935.26
liver, neonate N20.CNhs11220.823-25A327.03
liver, neonate N25.CNhs11198.1368-26H127.63
liver, neonate N30.CNhs11106.1382-42D19.65
lung, adult.CNhs10474.28-22B149.88
lung, embryo E12.CNhs10522.354-16G212.89
lung, embryo E14.CNhs10604.404-26F87.66
lung, embryo E15.CNhs11020.432-17C56.96
lung, embryo E16.CNhs10998.458-17B610.56
lung, embryo E17.CNhs10605.480-44A69.21
lung, embryo E18.CNhs10583.1287-20I611.66
lung, neonate N00.CNhs11224.640-42C617.37
lung, neonate N06.CNhs11212.683-20E518.76
lung, neonate N07.CNhs11111.715-19A321.70
lung, neonate N10.CNhs11219.750-23E619.61
lung, neonate N20.CNhs11109.822-18A448.34
lung, neonate N25.CNhs11119.1359-25C741.10
lung, neonate N30.CNhs11133.1394-42H243.25
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A130.16
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A138.62
mammary gland, adult lactating day02.CNhs10480.595-22B635.41
mammary gland, adult pregnant day19.CNhs10476.588-5H229.53
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.84
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.01
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.59
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.61
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.17
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.20
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.28
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I716.04
ovary, embryo E18.CNhs11040.505-44H79.44
ovary, neonate N00.CNhs11217.1299-22I410.91
oviduct, adult pregnant day01.CNhs10500.988-6G624.91
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F411.41
pancreas, embryo E15.CNhs11042.1556-45F211.19
pancreas, embryo E16.CNhs11003.460-26E510.37
pancreas, embryo E17.CNhs10599.1558-45G37.09
pancreas, embryo E18.CNhs10580.1535-43I77.07
pancreas, neonate N00.CNhs11105.645-26G919.90
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G812.94
pituitary gland, embryo E12.CNhs11018.346-16E612.24
pituitary gland, embryo E13.CNhs11009.370-44C710.48
pituitary gland, embryo E14.CNhs11037.398-44A56.86
pituitary gland, embryo E15.CNhs10592.427-16B96.74
pituitary gland, embryo E16.CNhs11036.449-43F69.99
pituitary gland, embryo E17.CNhs11039.1265-44F58.56
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I716.43
placenta, adult pregnant day17.CNhs10464.577-18G37.41
prostate, adult.CNhs10470.859-1F849.18
skin, adult.CNhs10492.30-1C33.13
skin, neonate N00.CNhs11124.650-25G44.20
skin, neonate N03.CNhs11215.662-22H33.98
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I143.14
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G215.89
spleen, embryo E16.CNhs11035.461-43C15.99
spleen, embryo E18.CNhs11011.1271-21F29.07
spleen, neonate N10.CNhs11116.752-24D113.37
spleen, neonate N20.CNhs11112.824-19H18.48
spleen, neonate N25.CNhs11099.1354-25G37.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C650.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C937.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D339.25
stomach, adult.CNhs10503.33-1H625.78
stomach, embryo E12.CNhs10588.356-43E315.66
stomach, embryo E15.CNhs10603.1252-16G88.74
stomach, embryo E16.CNhs11022.459-17D417.82
stomach, embryo E17.CNhs11006.1035-18D516.73
stomach, embryo E18.CNhs10999.1286-20C620.96
stomach, neonate N03.CNhs11193.1340-24B814.57
stomach, neonate N07.CNhs11210.718-18A914.55
stomach, neonate N25.CNhs11104.1355-25E412.30
stomach, neonate N30.CNhs11134.1386-42I1115.23
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F58.37
testis, embryo E15.CNhs11034.443-27C57.94
testis, embryo E16.CNhs11033.470-26G56.03
testis, embryo E17.CNhs11029.486-18I57.36
testis, embryo E18.CNhs11027.503-18G57.10
testis, neonate N00.CNhs11189.1300-22B76.10
testis, neonate N07.CNhs11222.726-26I48.33
testis, neonate N10.CNhs11204.763-44D95.14
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I412.37
thymus, embryo E15.CNhs11005.430-45I210.27
thymus, embryo E16.CNhs11002.456-26C57.02
thymus, embryo E17.CNhs10581.478-18C15.91
thymus, embryo E18.CNhs10595.1273-19G46.76
thymus, neonate N02.CNhs11181.1541-43F84.09
thymus, neonate N03.CNhs11137.2104-43C74.28
thymus, neonate N06.CNhs11197.681-26C45.96
thymus, neonate N07.CNhs11211.713-19D33.73
thymus, neonate N10.CNhs11194.748-24E44.74
thymus, neonate N20.CNhs11186.820-7A25.75
thymus, neonate N25.CNhs11125.1362-25G74.91
thymus, neonate N30.CNhs11132.1393-42G24.21
tongue, adult.CNhs10499.32-1B48.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.19
urinary bladder, adult.CNhs10481.879-12E48.89
uterus, adult pregnant day19.CNhs10497.590-15F532.28
uterus, adult.CNhs10509.92-27E559.89
vagina, adult.CNhs10502.89-27D519.08
vesicular gland, adult.CNhs10491.51-27F814.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I810.59
whole body, embryo E12.CNhs10587.857-27C911.57
whole body, embryo E13.CNhs10512.372-23H28.20
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B17.55
whole body, embryo E16.CNhs10514.453-14F28.82
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.50
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.59
whole body, embryo E17.5.CNhs10513.490-9F911.57
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B311.23
whole body, neonate N00.CNhs10525.657-19C213.97
whole body, neonate N01.CNhs10576.659-23C65.74
whole body, neonate N06.CNhs10515.692-21D17.06
whole body, neonate N10.CNhs10518.761-6B45.56





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell4.72e-0825
endodermal cell8.46e-0820
endo-epithelial cell9.13e-0715

Uber anatomy
Ontology termp-valuen
intestine2.91e-1431
digestive system1.52e-13116
digestive tract1.52e-13116
primitive gut1.52e-13116
endoderm-derived structure1.69e-13118
endoderm1.69e-13118
presumptive endoderm1.69e-13118
gastrointestinal system2.37e-1347
subdivision of digestive tract1.26e-12114
trunk5.77e-0990
mucosa1.90e-0815
intestinal mucosa2.08e-0713
wall of intestine2.08e-0713
gastrointestinal system mucosa2.08e-0713
subdivision of trunk3.21e-0766
mesenchyme4.94e-0761
entire embryonic mesenchyme4.94e-0761







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