FFCP PHASE1:Mm9::chr4:82667033..82667039,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=329872|HGNC=|MCL_coexpression_id=173|UniProt=Q684R7|association_with_transcript=-27bp_to_ENSMUST00000071708,NM_177863,uc008tkm.2,uc012dgo.1_5end|description=CAGE_peak_10_at_Frem1_5end|id=chr4:82667033..82667039,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!1.91e-11!9;UBERON:0000019!1.91e-11!9;UBERON:0000047!1.91e-11!9;UBERON:0004088!1.91e-11!9;UBERON:0002104!1.91e-11!9;UBERON:0001456!1.91e-11!9;UBERON:0003072!1.91e-11!9;UBERON:0003071!1.91e-11!9;UBERON:0004128!1.91e-11!9;UBERON:0001444!3.02e-09!11;UBERON:0000020!2.01e-08!12;UBERON:0001032!2.01e-08!12;UBERON:0004456!2.01e-08!12;UBERON:0002113!7.80e-08!14;UBERON:0003918!7.80e-08!14;UBERON:0005095!7.80e-08!14;UBERON:0007687!7.80e-08!14;UBERON:0005085!1.00e-07!13;UBERON:0006554!9.22e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.06e-22,14;UBERON:0003918,1.06e-22,14;UBERON:0011143,1.06e-22,14;UBERON:0005095,1.06e-22,14;UBERON:0007687,1.06e-22,14;UBERON:0006554,9.33e-18,18;UBERON:0001008,7.63e-17,19;UBERON:0000489,2.81e-15,21;UBERON:0003103,1.31e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360124259610698,1.20563854268572,1.02054748726992,0.2562274405697,0.187403449119458,0.258703370739016,0.646703978798527,0,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,1.71372768914593,1.1270773567308,1.83286195060783,1.16371492300575,1.26244475802573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0,0,0,0.238436189947321,0,0.188218760830661,0.25384382367503,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p10@Frem1}} | ||
|EntrezGene=329872 | |||
|HGNC= | |||
|MCL_coexpression_id=173 | |||
|UniProt=Q684R7 | |||
|association_with_transcript=-27bp_to_ENSMUST00000071708,NM_177863,uc008tkm.2,uc012dgo.1_5end | |||
|description=CAGE_peak_10_at_Frem1_5end | |||
|id=chr4:82667033..82667039,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.91e-11!9;UBERON:0000019!1.91e-11!9;UBERON:0000047!1.91e-11!9;UBERON:0004088!1.91e-11!9;UBERON:0002104!1.91e-11!9;UBERON:0001456!1.91e-11!9;UBERON:0003072!1.91e-11!9;UBERON:0003071!1.91e-11!9;UBERON:0004128!1.91e-11!9;UBERON:0001444!3.02e-09!11;UBERON:0000020!2.01e-08!12;UBERON:0001032!2.01e-08!12;UBERON:0004456!2.01e-08!12;UBERON:0002113!7.80e-08!14;UBERON:0003918!7.80e-08!14;UBERON:0005095!7.80e-08!14;UBERON:0007687!7.80e-08!14;UBERON:0005085!1.00e-07!13;UBERON:0006554!9.22e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.06e-22,14;UBERON:0003918,1.06e-22,14;UBERON:0011143,1.06e-22,14;UBERON:0005095,1.06e-22,14;UBERON:0007687,1.06e-22,14;UBERON:0006554,9.33e-18,18;UBERON:0001008,7.63e-17,19;UBERON:0000489,2.81e-15,21;UBERON:0003103,1.31e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360124259610698,1.20563854268572,1.02054748726992,0.2562274405697,0.187403449119458,0.258703370739016,0.646703978798527,0,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,1.71372768914593,1.1270773567308,1.83286195060783,1.16371492300575,1.26244475802573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0,0,0,0.238436189947321,0,0.188218760830661,0.25384382367503,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p10@Frem1 | |||
}} |
Revision as of 05:30, 14 September 2013
Short description: | p10@Frem1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Frem1_5end |
Coexpression cluster: | MCL_coexpression_mm9:173 |
Association with transcript: | -27bp_to_ENSMUST00000071708, NM_177863, uc008tkm.2, uc012dgo.1_5end |
EntrezGene: | Frem1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.06e-22 | 14 |
kidney mesenchyme | 1.06e-22 | 14 |
upper urinary tract | 1.06e-22 | 14 |
kidney rudiment | 1.06e-22 | 14 |
kidney field | 1.06e-22 | 14 |
urinary system structure | 9.33e-18 | 18 |
renal system | 7.63e-17 | 19 |
cavitated compound organ | 2.81e-15 | 21 |
compound organ | 1.31e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.