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FFCP PHASE1:Mm9::chr3:133902218..133902243,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1454|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:133902218..133902243,+|id=chr3:133902218..133902243,+|ontology_enrichment_celltype=CL:0000117!1.25e-08!23;CL:0000337!1.25e-08!23;CL:0000540!9.12e-07!33;CL:0000047!9.12e-07!33;CL:0000031!9.12e-07!33;CL:0000404!9.12e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,9.82e-10,23;CL:0000337,9.82e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.44e-19!71;UBERON:0003075!2.44e-19!71;UBERON:0007284!2.44e-19!71;UBERON:0000033!1.11e-18!63;UBERON:0004121!4.90e-17!102;UBERON:0000924!4.90e-17!102;UBERON:0006601!4.90e-17!102;UBERON:0003056!1.64e-16!49;UBERON:0001049!3.24e-16!52;UBERON:0005068!3.24e-16!52;UBERON:0006241!3.24e-16!52;UBERON:0007135!3.24e-16!52;UBERON:0001017!6.41e-16!73;UBERON:0005743!6.41e-16!73;UBERON:0000955!6.96e-16!50;UBERON:0006238!6.96e-16!50;UBERON:0002616!3.30e-15!49;UBERON:0000073!3.91e-15!75;UBERON:0001016!3.91e-15!75;UBERON:0003080!3.77e-12!40;UBERON:0002780!1.66e-11!39;UBERON:0001890!1.66e-11!39;UBERON:0006240!1.66e-11!39;UBERON:0000153!4.02e-09!94;UBERON:0002020!4.61e-09!34;UBERON:0000468!1.52e-08!333;UBERON:0007811!2.62e-08!86;UBERON:0002791!2.62e-07!29;UBERON:0003528!2.62e-07!29;UBERON:0001893!2.62e-07!29;UBERON:0000922!6.01e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.59e-22,64;UBERON:0003075,5.59e-22,64;UBERON:0007284,5.59e-22,64;UBERON:0010314,5.25e-20,92;UBERON:0000073,2.20e-19,54;UBERON:0010371,1.92e-18,73;UBERON:0003056,2.19e-18,49;UBERON:0001049,4.29e-18,52;UBERON:0005068,4.29e-18,52;UBERON:0006241,4.29e-18,52;UBERON:0007135,4.29e-18,52;UBERON:0004121,6.35e-18,95;UBERON:0000924,6.35e-18,95;UBERON:0006601,6.35e-18,95;UBERON:0001017,1.02e-17,73;UBERON:0001016,9.81e-17,75;UBERON:0000955,1.41e-15,47;UBERON:0006238,1.41e-15,47;UBERON:0002616,9.37e-15,46;UBERON:0003080,7.77e-13,40;UBERON:0002780,4.87e-12,39;UBERON:0001890,4.87e-12,39;UBERON:0006240,4.87e-12,39;UBERON:0002020,5.14e-09,34;UBERON:0001894,4.01e-07,10;UBERON:0006222,4.01e-07,10;UBERON:0000970,6.26e-07,9;UBERON:0000019,6.26e-07,9;UBERON:0000047,6.26e-07,9;UBERON:0010312,6.26e-07,9;UBERON:0004088,6.26e-07,9;UBERON:0002104,6.26e-07,9;UBERON:0001456,6.26e-07,9;UBERON:0003072,6.26e-07,9;UBERON:0004128,6.26e-07,9;UBERON:0003071,6.26e-07,9;UBERON:0003528,7.44e-07,29;UBERON:0002791,7.44e-07,29;UBERON:0001893,7.44e-07,29|phase1_expression=1.12104192973356,0,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.436050312760893,0,0.777719596297134,0,0,0,0,0,0,0,0,4.65327859977075,2.11596391708813,3.1691570175309,1.0165335962074,0,0,0,0,0,0.384218305321555,1.03689612308478,0.405017814995072,0.210324961351382,1.71390590642282,1.10434270475807,1.10241719293459,2.58782771749238,0.919218786610021,3.30347642998166,2.42605942361857,2.91852413186863,3.56092976871523,3.47653045689157,7.29278718779464,1.11673199600552,2.8138130501584,1.98637722109853,2.06240009831567,3.27454865837937,2.79599168737951,0.075726193333184,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,1.1875371125186,1.21439728736295,0.608930956624282,0.230615497256059,0.301445281105245,1.88141931417128,0.502666365318702,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,13.7606974595427,9.63454851341893,0,0,0,0,7.04016005202667,2.74500361691176,6.03140890141749,2.9550134432687,2.04572365864264,3.32460871295296,4.05603157669394,2.54598409625791,0.248813941220186,0,2.10441855886474,1.69156575851515,1.37941262660084,1.98068342785884,2.56198190320716,5.44291993210623,5.12454881139399,3.18585863503078,3.88055056108524,2.58681591519411,0.756424320671277,2.46331573829528,1.09597866213787,1.66828349535359,1.39300866608867,0.205782136407943,0.796137067273973,0,0,0,1.86413195281952,2.81431271977315,1.62055855314913,2.3674473558521,1.57411385397923,1.85120535464854,1.39520366850245,0,1.5179494507732,1.15191894939436,1.14917224855367,0.810688095458557,0.584799949701329,0.658650345873152,0.805238512562231,1.05144974282064,1.64647379806855,0,0.264450566663544,0.853153002140936,0.928946687441754,0.644337306610467,1.61346819698674,0.667134131534611,0.951128130562796,0,0.164698954724011,0.251335208800269,0.795825888164603,0.779856348476481,0,0.216138049874694,0,0.758671603812327,1.25673363870702,2.25415471346161,0.407302655690628,0.969762435838129,0.771494018793504,0.252946148497029,0.147610147979602,0.156998727841375,0.123397163921801,0,0.500535317148282,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0.369506380333209,0.757965647081939,0.814824882210129,0.509235257325564,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.472905432318573,0.44292937929755,0.637819074629948,0.327726629431476,0.34536996373179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|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=1454
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr3:133902218..133902243,+
|id=chr3:133902218..133902243,+
|ontology_enrichment_celltype=CL:0000117!1.25e-08!23;CL:0000337!1.25e-08!23;CL:0000540!9.12e-07!33;CL:0000047!9.12e-07!33;CL:0000031!9.12e-07!33;CL:0000404!9.12e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,9.82e-10,23;CL:0000337,9.82e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.59e-22,64;UBERON:0003075,5.59e-22,64;UBERON:0007284,5.59e-22,64;UBERON:0010314,5.25e-20,92;UBERON:0000073,2.20e-19,54;UBERON:0010371,1.92e-18,73;UBERON:0003056,2.19e-18,49;UBERON:0001049,4.29e-18,52;UBERON:0005068,4.29e-18,52;UBERON:0006241,4.29e-18,52;UBERON:0007135,4.29e-18,52;UBERON:0004121,6.35e-18,95;UBERON:0000924,6.35e-18,95;UBERON:0006601,6.35e-18,95;UBERON:0001017,1.02e-17,73;UBERON:0001016,9.81e-17,75;UBERON:0000955,1.41e-15,47;UBERON:0006238,1.41e-15,47;UBERON:0002616,9.37e-15,46;UBERON:0003080,7.77e-13,40;UBERON:0002780,4.87e-12,39;UBERON:0001890,4.87e-12,39;UBERON:0006240,4.87e-12,39;UBERON:0002020,5.14e-09,34;UBERON:0001894,4.01e-07,10;UBERON:0006222,4.01e-07,10;UBERON:0000970,6.26e-07,9;UBERON:0000019,6.26e-07,9;UBERON:0000047,6.26e-07,9;UBERON:0010312,6.26e-07,9;UBERON:0004088,6.26e-07,9;UBERON:0002104,6.26e-07,9;UBERON:0001456,6.26e-07,9;UBERON:0003072,6.26e-07,9;UBERON:0004128,6.26e-07,9;UBERON:0003071,6.26e-07,9;UBERON:0003528,7.44e-07,29;UBERON:0002791,7.44e-07,29;UBERON:0001893,7.44e-07,29
|phase1_expression=1.12104192973356,0,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.436050312760893,0,0.777719596297134,0,0,0,0,0,0,0,0,4.65327859977075,2.11596391708813,3.1691570175309,1.0165335962074,0,0,0,0,0,0.384218305321555,1.03689612308478,0.405017814995072,0.210324961351382,1.71390590642282,1.10434270475807,1.10241719293459,2.58782771749238,0.919218786610021,3.30347642998166,2.42605942361857,2.91852413186863,3.56092976871523,3.47653045689157,7.29278718779464,1.11673199600552,2.8138130501584,1.98637722109853,2.06240009831567,3.27454865837937,2.79599168737951,0.075726193333184,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,1.1875371125186,1.21439728736295,0.608930956624282,0.230615497256059,0.301445281105245,1.88141931417128,0.502666365318702,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,13.7606974595427,9.63454851341893,0,0,0,0,7.04016005202667,2.74500361691176,6.03140890141749,2.9550134432687,2.04572365864264,3.32460871295296,4.05603157669394,2.54598409625791,0.248813941220186,0,2.10441855886474,1.69156575851515,1.37941262660084,1.98068342785884,2.56198190320716,5.44291993210623,5.12454881139399,3.18585863503078,3.88055056108524,2.58681591519411,0.756424320671277,2.46331573829528,1.09597866213787,1.66828349535359,1.39300866608867,0.205782136407943,0.796137067273973,0,0,0,1.86413195281952,2.81431271977315,1.62055855314913,2.3674473558521,1.57411385397923,1.85120535464854,1.39520366850245,0,1.5179494507732,1.15191894939436,1.14917224855367,0.810688095458557,0.584799949701329,0.658650345873152,0.805238512562231,1.05144974282064,1.64647379806855,0,0.264450566663544,0.853153002140936,0.928946687441754,0.644337306610467,1.61346819698674,0.667134131534611,0.951128130562796,0,0.164698954724011,0.251335208800269,0.795825888164603,0.779856348476481,0,0.216138049874694,0,0.758671603812327,1.25673363870702,2.25415471346161,0.407302655690628,0.969762435838129,0.771494018793504,0.252946148497029,0.147610147979602,0.156998727841375,0.123397163921801,0,0.500535317148282,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0.369506380333209,0.757965647081939,0.814824882210129,0.509235257325564,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.472905432318573,0.44292937929755,0.637819074629948,0.327726629431476,0.345369963731791,0,0,0,0.491764273019036,1.37968373152366,3.21101179975584,4.10240903072711,0,0,0,0.390438744296638,0.646270193198397,0,0.222798674082394,0.283076530788832,0.809621403349789,2.04579100537918,1.18586333383957,6.74774764485795,2.98074178937364,1.42452482933804,0.651547837414304,0.659880491890142,0,2.6705869977048,1.81394134178851,3.01768127609437,1.18120757152309,2.15204603560749,1.29214146584111,0.727067458955011,1.06949213515416,0.948110273807448,0,0,2.38307724027652,2.52085531643834,1.81102157295856,2.14337035031592,3.19212420556092,2.31879462882692,1.15184314421485,2.13125464380219,0,0,0.882113592219848,0.8244312647074,0.645857706783622,0.603129249281559,0.238744688006273,0,1.1659233465194,4.07935664423121,0,1.857481811669,0.555583582109135,0,0.136694227721025,0,0,0,0,1.90934123603023,3.32152793260192,2.64315307264903,1.29606408986162,1.04544148007234,0.436725127492355,1.21377911746339,1.23980183588004,0,0.129614973291793,0,0,0.747582730219894,1.82004339502807,1.55560950675238,0.774958940866387,2.02747350588934,3.0512882047896,1.17183946359555,0.629156066554265,0,0,0,0.405450430580328,0.718976700153791,0.77952493786677,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,1.50471631210609,4.51801474093653,1.38097570952153,0.572895513439397,1.03111909406213,2.05524755931193,3.0215755895588,0.675022500231806,3.15224842256954,3.62513927187364,0.51776031175182,2.07574695168353,1.59609949360412,1.36586884603307,1.21553358534147,0.419226325255965,1.2869045591501,1.33348036680969,2.06035057238894,0.320919209591815,0.252697211763798,1.77435509923168,0.754505365544305,0.842773567228942,1.02440243847791,0.689225627467359,0.952587382566147,1.0429589335037,0.38581844092741,0.412085900803307,1.47198920134397,1.71434626192708,2.12970967391205,0.715308569841963,1.45346416632329,1.2234219453993,1.77690676572521,0.365855945745545,1.31534855718921,1.35804113845862,1.12228454331548,0.474540072496697,1.37906275325789,1.63692417267876,0.619747364743864,1.92906610981141,0.499621155875892,0.701794825336225,0.644613162144895,0.765153328275374,0.220591419119515,0.695603506861264
|short_description=p@chr3:133902218..133902243,+
}}

Revision as of 01:36, 14 September 2013

Short description:p@chr3:133902218..133902243, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr3:133902218..133902243, +
Coexpression cluster:MCL_coexpression_mm9:1454
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr3:133902218..133902243+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B213.76
cerebellum, neonate N30.CNhs11135.1395-42I29.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.04
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F16.03
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C65.44
eyeball, neonate N01.CNhs11140.1532-43E75.12
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E53.02
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E33.32
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.82e-1023
neuroblast (sensu Vertebrata)9.82e-1023

Uber anatomy
Ontology termp-valuen
neurectoderm5.59e-2264
neural plate5.59e-2264
presumptive neural plate5.59e-2264
structure with developmental contribution from neural crest5.25e-2092
regional part of nervous system2.20e-1954
ecto-epithelium1.92e-1873
pre-chordal neural plate2.19e-1849
neural tube4.29e-1852
neural rod4.29e-1852
future spinal cord4.29e-1852
neural keel4.29e-1852
ectoderm-derived structure6.35e-1895
ectoderm6.35e-1895
presumptive ectoderm6.35e-1895
central nervous system1.02e-1773
nervous system9.81e-1775
brain1.41e-1547
future brain1.41e-1547
regional part of brain9.37e-1546
anterior neural tube7.77e-1340
regional part of forebrain4.87e-1239
forebrain4.87e-1239
future forebrain4.87e-1239
gray matter5.14e-0934
diencephalon4.01e-0710
future diencephalon4.01e-0710
eye6.26e-079
camera-type eye6.26e-079
simple eye6.26e-079
immature eye6.26e-079
ocular region6.26e-079
visual system6.26e-079
face6.26e-079
optic cup6.26e-079
optic vesicle6.26e-079
eye primordium6.26e-079
brain grey matter7.44e-0729
regional part of telencephalon7.44e-0729
telencephalon7.44e-0729







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