FFCP PHASE1:Mm9::chr1:174128194..174128210,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=176|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:174128194..174128210,-|id=chr1:174128194..174128210,-|ontology_enrichment_celltype=CL:0000055!2.89e-15!50;CL:0002319!7.93e-14!43;CL:0000221!3.22e-13!44;CL:0000133!3.22e-13!44;CL:0000393!1.59e-10!39;CL:0000211!1.59e-10!39;CL:0000117!3.18e-09!23;CL:0000337!3.18e-09!23;CL:0000540!1.24e-08!33;CL:0000047!1.24e-08!33;CL:0000031!1.24e-08!33;CL:0000404!1.24e-08!33;CL:0002321!2.26e-08!70;CL:0000220!2.26e-08!70;CL:0000333!7.70e-07!10;CL:0000095!7.70e-07!10;CL:0000243!7.70e-07!10;CL:0000123!7.70e-07!10;CL:0000125!7.70e-07!10;CL:0000030!7.70e-07!10;CL:0000339!7.70e-07!10|ontology_enrichment_celltype_v019_2=CL:0002453,3.44e-28,8;CL:0000333,2.06e-22,10;CL:0000095,2.06e-22,10;CL:0000243,2.06e-22,10;CL:0000123,2.06e-22,10;CL:0000125,2.06e-22,10;CL:0000030,2.06e-22,10;CL:0000339,2.06e-22,10;CL:0000128,1.86e-19,6;CL:0000126,1.86e-19,6;CL:0000127,1.86e-19,6;CL:0002092,4.96e-14,3;CL:0002540,4.96e-14,3;CL:0002194,2.72e-11,4;CL:0000766,2.72e-11,4;CL:0000234,2.72e-11,4;CL:0000576,2.72e-11,4;CL:0000235,2.72e-11,4;CL:0000864,2.72e-11,4;CL:0002009,2.72e-11,4;CL:0000040,2.72e-11,4;CL:0000559,2.72e-11,4;CL:0002319,4.24e-11,43;CL:0000221,8.31e-11,44;CL:0000133,8.31e-11,44;CL:0000878,1.47e-10,2;CL:0002605,1.47e-10,2;CL:0000129,1.47e-10,2;CL:0002604,1.47e-10,2;CL:0000219,1.13e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.14e-17!75;UBERON:0001016!3.14e-17!75;UBERON:0001017!1.21e-16!73;UBERON:0005743!1.21e-16!73;UBERON:0004121!1.46e-13!102;UBERON:0000924!1.46e-13!102;UBERON:0006601!1.46e-13!102;UBERON:0002020!1.28e-12!34;UBERON:0001049!1.37e-12!52;UBERON:0005068!1.37e-12!52;UBERON:0006241!1.37e-12!52;UBERON:0007135!1.37e-12!52;UBERON:0002616!2.51e-11!49;UBERON:0002346!5.57e-11!71;UBERON:0003075!5.57e-11!71;UBERON:0007284!5.57e-11!71;UBERON:0002791!7.24e-11!29;UBERON:0003528!7.24e-11!29;UBERON:0001893!7.24e-11!29;UBERON:0000955!7.52e-11!50;UBERON:0006238!7.52e-11!50;UBERON:0000033!6.04e-10!63;UBERON:0003080!2.94e-09!40;UBERON:0003056!6.48e-09!49;UBERON:0002780!7.68e-09!39;UBERON:0001890!7.68e-09!39;UBERON:0006240!7.68e-09!39;UBERON:0000025!1.59e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.06e-10,16;UBERON:0001017,8.28e-10,73;UBERON:0001016,1.75e-09,75;UBERON:0000956,3.60e-07,21;UBERON:0001869,3.60e-07,21;UBERON:0000203,3.60e-07,21;UBERON:0001474,4.32e-07,22;UBERON:0004765,4.32e-07,22;UBERON:0001434,4.32e-07,22;UBERON:0004121,5.44e-07,95;UBERON:0000924,5.44e-07,95;UBERON:0006601,5.44e-07,95;UBERON:0003528,8.39e-07,29;UBERON:0002791,8.39e-07,29;UBERON:0001893,8.39e-07,29|phase1_expression=0,0,0,0,0,0,0,0,0,0.468129052643987,0,0,0.171200729931206,0,0.333109761815663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.183546752161682,0,10.0291571935005,3.95435128922049,7.77719596297134,2.09979632438044,1.43752564364972,0.167782606057736,0.725362142011344,0,0.771778308107841,0,0.515672092277442,0.404632921719196,0,1.26766280701236,0.677689064138264,0.889294796111139,1.3498495759221,1.97773272513395,2.8419204597844,5.09320187881288,6.53171119046643,0.414758449233911,1.21505344498522,0.420649922702764,0.856952953211411,0.662605622854841,0.244981598429908,0.191690942036473,0,0,0.766124028511126,1.0752457327937,0.395658863190582,0.731901148819277,0.52091337055676,0.558365998002762,2.8138130501584,0.15279824777681,0.294628585473668,0.569486723196412,0,0.151452386666368,0.226714680320357,0.579728977403356,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0,0.258937883647172,0.29688427812965,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0.299581278809645,0.915001205637253,0.251308704225729,0.173824320192276,0,0.41557608911912,0.324482526135515,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0.536546802799238,0,0.329119699826961,0.492502392237286,0,0,0,0,0.210289948564127,0.308713837137853,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,1.1270773567308,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,0.369506380333209,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.289298117163023,3.01582567878545,0,0,0,0.321101179975584,0.468846746368813,0,0,0,0.390438744296638,0,0.238968797952552,0.445597348164788,0,0.404810701674894,0,0.395287777946524,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0.621339313086926,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0,0,0,0,0,0,0.201932899896295,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,1.12950368523413,1.38097570952153,0,0.171853182343688,0,0,0,0.900642406448441,1.35942722695261,0.51776031175182,0.103787347584177,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0,0,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0,0,0,0,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0,0.191288332068843,0,0.231867835620421|short_description=p@chr1:174128194..174128210,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:174128194..174128210,- | |||
|id=chr1:174128194..174128210,- | |||
|ontology_enrichment_celltype=CL:0000055!2.89e-15!50;CL:0002319!7.93e-14!43;CL:0000221!3.22e-13!44;CL:0000133!3.22e-13!44;CL:0000393!1.59e-10!39;CL:0000211!1.59e-10!39;CL:0000117!3.18e-09!23;CL:0000337!3.18e-09!23;CL:0000540!1.24e-08!33;CL:0000047!1.24e-08!33;CL:0000031!1.24e-08!33;CL:0000404!1.24e-08!33;CL:0002321!2.26e-08!70;CL:0000220!2.26e-08!70;CL:0000333!7.70e-07!10;CL:0000095!7.70e-07!10;CL:0000243!7.70e-07!10;CL:0000123!7.70e-07!10;CL:0000125!7.70e-07!10;CL:0000030!7.70e-07!10;CL:0000339!7.70e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.44e-28,8;CL:0000333,2.06e-22,10;CL:0000095,2.06e-22,10;CL:0000243,2.06e-22,10;CL:0000123,2.06e-22,10;CL:0000125,2.06e-22,10;CL:0000030,2.06e-22,10;CL:0000339,2.06e-22,10;CL:0000128,1.86e-19,6;CL:0000126,1.86e-19,6;CL:0000127,1.86e-19,6;CL:0002092,4.96e-14,3;CL:0002540,4.96e-14,3;CL:0002194,2.72e-11,4;CL:0000766,2.72e-11,4;CL:0000234,2.72e-11,4;CL:0000576,2.72e-11,4;CL:0000235,2.72e-11,4;CL:0000864,2.72e-11,4;CL:0002009,2.72e-11,4;CL:0000040,2.72e-11,4;CL:0000559,2.72e-11,4;CL:0002319,4.24e-11,43;CL:0000221,8.31e-11,44;CL:0000133,8.31e-11,44;CL:0000878,1.47e-10,2;CL:0002605,1.47e-10,2;CL:0000129,1.47e-10,2;CL:0002604,1.47e-10,2;CL:0000219,1.13e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.14e-17!75;UBERON:0001016!3.14e-17!75;UBERON:0001017!1.21e-16!73;UBERON:0005743!1.21e-16!73;UBERON:0004121!1.46e-13!102;UBERON:0000924!1.46e-13!102;UBERON:0006601!1.46e-13!102;UBERON:0002020!1.28e-12!34;UBERON:0001049!1.37e-12!52;UBERON:0005068!1.37e-12!52;UBERON:0006241!1.37e-12!52;UBERON:0007135!1.37e-12!52;UBERON:0002616!2.51e-11!49;UBERON:0002346!5.57e-11!71;UBERON:0003075!5.57e-11!71;UBERON:0007284!5.57e-11!71;UBERON:0002791!7.24e-11!29;UBERON:0003528!7.24e-11!29;UBERON:0001893!7.24e-11!29;UBERON:0000955!7.52e-11!50;UBERON:0006238!7.52e-11!50;UBERON:0000033!6.04e-10!63;UBERON:0003080!2.94e-09!40;UBERON:0003056!6.48e-09!49;UBERON:0002780!7.68e-09!39;UBERON:0001890!7.68e-09!39;UBERON:0006240!7.68e-09!39;UBERON:0000025!1.59e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.06e-10,16;UBERON:0001017,8.28e-10,73;UBERON:0001016,1.75e-09,75;UBERON:0000956,3.60e-07,21;UBERON:0001869,3.60e-07,21;UBERON:0000203,3.60e-07,21;UBERON:0001474,4.32e-07,22;UBERON:0004765,4.32e-07,22;UBERON:0001434,4.32e-07,22;UBERON:0004121,5.44e-07,95;UBERON:0000924,5.44e-07,95;UBERON:0006601,5.44e-07,95;UBERON:0003528,8.39e-07,29;UBERON:0002791,8.39e-07,29;UBERON:0001893,8.39e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.468129052643987,0,0,0.171200729931206,0,0.333109761815663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.183546752161682,0,10.0291571935005,3.95435128922049,7.77719596297134,2.09979632438044,1.43752564364972,0.167782606057736,0.725362142011344,0,0.771778308107841,0,0.515672092277442,0.404632921719196,0,1.26766280701236,0.677689064138264,0.889294796111139,1.3498495759221,1.97773272513395,2.8419204597844,5.09320187881288,6.53171119046643,0.414758449233911,1.21505344498522,0.420649922702764,0.856952953211411,0.662605622854841,0.244981598429908,0.191690942036473,0,0,0.766124028511126,1.0752457327937,0.395658863190582,0.731901148819277,0.52091337055676,0.558365998002762,2.8138130501584,0.15279824777681,0.294628585473668,0.569486723196412,0,0.151452386666368,0.226714680320357,0.579728977403356,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0,0.258937883647172,0.29688427812965,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0.299581278809645,0.915001205637253,0.251308704225729,0.173824320192276,0,0.41557608911912,0.324482526135515,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.2562274405697,0.187403449119458,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0.536546802799238,0,0.329119699826961,0.492502392237286,0,0,0,0,0.210289948564127,0.308713837137853,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,1.1270773567308,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,0.369506380333209,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.289298117163023,3.01582567878545,0,0,0,0.321101179975584,0.468846746368813,0,0,0,0.390438744296638,0,0.238968797952552,0.445597348164788,0,0.404810701674894,0,0.395287777946524,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0.621339313086926,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0,0,0,0,0,0,0.201932899896295,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,1.12950368523413,1.38097570952153,0,0.171853182343688,0,0,0,0.900642406448441,1.35942722695261,0.51776031175182,0.103787347584177,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0,0,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0,0,0,0,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr1:174128194..174128210,- | |||
}} |
Revision as of 19:44, 13 September 2013
Short description: | p@chr1:174128194..174128210, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:174128194..174128210, - |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.44e-28 | 8 |
migratory neural crest cell | 2.06e-22 | 10 |
neuron associated cell | 2.06e-22 | 10 |
glial cell (sensu Vertebrata) | 2.06e-22 | 10 |
neuron associated cell (sensu Vertebrata) | 2.06e-22 | 10 |
glial cell | 2.06e-22 | 10 |
glioblast | 2.06e-22 | 10 |
glioblast (sensu Vertebrata) | 2.06e-22 | 10 |
oligodendrocyte | 1.86e-19 | 6 |
macroglial cell | 1.86e-19 | 6 |
astrocyte | 1.86e-19 | 6 |
bone marrow cell | 4.96e-14 | 3 |
mesenchymal stem cell of the bone marrow | 4.96e-14 | 3 |
monopoietic cell | 2.72e-11 | 4 |
myeloid leukocyte | 2.72e-11 | 4 |
phagocyte | 2.72e-11 | 4 |
monocyte | 2.72e-11 | 4 |
macrophage | 2.72e-11 | 4 |
tissue-resident macrophage | 2.72e-11 | 4 |
macrophage dendritic cell progenitor | 2.72e-11 | 4 |
monoblast | 2.72e-11 | 4 |
promonocyte | 2.72e-11 | 4 |
neural cell | 4.24e-11 | 43 |
ectodermal cell | 8.31e-11 | 44 |
neurectodermal cell | 8.31e-11 | 44 |
central nervous system macrophage | 1.47e-10 | 2 |
astrocyte of the cerebral cortex | 1.47e-10 | 2 |
microglial cell | 1.47e-10 | 2 |
astrocyte of the hippocampus | 1.47e-10 | 2 |
motile cell | 1.13e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.06e-10 | 16 |
central nervous system | 8.28e-10 | 73 |
nervous system | 1.75e-09 | 75 |
cerebral cortex | 3.60e-07 | 21 |
cerebral hemisphere | 3.60e-07 | 21 |
pallium | 3.60e-07 | 21 |
bone element | 4.32e-07 | 22 |
skeletal element | 4.32e-07 | 22 |
skeletal system | 4.32e-07 | 22 |
ectoderm-derived structure | 5.44e-07 | 95 |
ectoderm | 5.44e-07 | 95 |
presumptive ectoderm | 5.44e-07 | 95 |
brain grey matter | 8.39e-07 | 29 |
regional part of telencephalon | 8.39e-07 | 29 |
telencephalon | 8.39e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.