FFCP PHASE1:Mm9::chr12:86479683..86479693,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:86479683..86479693,-|id=chr12:86479683..86479693,-|ontology_enrichment_celltype=CL:0000473!2.56e-25!3;CL:0000627!2.56e-25!3;CL:0000682!2.56e-25!3;CL:0000239!9.30e-22!6;CL:0000677!9.30e-22!6;CL:0000212!9.30e-22!6;CL:0000584!9.30e-22!6;CL:0000075!1.03e-18!7;CL:0000066!1.34e-15!25;CL:0002563!1.22e-14!9;CL:0002251!1.22e-14!9;CL:0002076!6.56e-09!15;CL:0000223!9.65e-07!20|ontology_enrichment_celltype_v019_2=CL:0000682,2.30e-30,3;CL:0000239,3.59e-26,6;CL:0000677,3.59e-26,6;CL:0000584,3.59e-26,6;CL:0000075,1.64e-22,7;CL:0000066,4.62e-19,25;CL:0002563,1.27e-17,9;CL:0002251,1.27e-17,9;CL:0000473,1.91e-13,7;CL:0002076,9.63e-11,15;CL:0000223,3.83e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.31e-25!15;UBERON:0001962!8.27e-17!2;UBERON:0001961!8.27e-17!2;UBERON:0001744!8.27e-17!2;UBERON:0004923!6.47e-16!24;UBERON:0001242!2.07e-15!13;UBERON:0000060!2.07e-15!13;UBERON:0001262!2.07e-15!13;UBERON:0004786!2.07e-15!13;UBERON:0003350!1.22e-14!9;UBERON:0004808!1.22e-14!9;UBERON:0001277!1.22e-14!9;UBERON:0000485!4.84e-12!11;UBERON:0002465!1.55e-11!3;UBERON:0003199!3.65e-09!1|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.20e-23,15;UBERON:0001962,4.89e-20,2;UBERON:0001961,4.89e-20,2;UBERON:0001744,4.89e-20,2;UBERON:0003350,1.27e-17,9;UBERON:0004808,1.27e-17,9;UBERON:0001277,1.27e-17,9;UBERON:0000485,1.68e-14,11;UBERON:0004923,1.80e-14,24;UBERON:0002465,1.04e-13,3;UBERON:0001242,2.46e-12,13;UBERON:0001262,2.46e-12,13;UBERON:0004786,2.46e-12,13;UBERON:0003199,8.99e-11,1|phase1_expression=0,4.53668029931169,8.18998630901165,0,0,3.02182689441402,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19984845586813,2.2940928106717,5.16808767703518,4.73838195774982,5.60225204983311,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:86479683..86479693,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:86479683..86479693,- | |||
|id=chr12:86479683..86479693,- | |||
|ontology_enrichment_celltype=CL:0000473!2.56e-25!3;CL:0000627!2.56e-25!3;CL:0000682!2.56e-25!3;CL:0000239!9.30e-22!6;CL:0000677!9.30e-22!6;CL:0000212!9.30e-22!6;CL:0000584!9.30e-22!6;CL:0000075!1.03e-18!7;CL:0000066!1.34e-15!25;CL:0002563!1.22e-14!9;CL:0002251!1.22e-14!9;CL:0002076!6.56e-09!15;CL:0000223!9.65e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.30e-30,3;CL:0000239,3.59e-26,6;CL:0000677,3.59e-26,6;CL:0000584,3.59e-26,6;CL:0000075,1.64e-22,7;CL:0000066,4.62e-19,25;CL:0002563,1.27e-17,9;CL:0002251,1.27e-17,9;CL:0000473,1.91e-13,7;CL:0002076,9.63e-11,15;CL:0000223,3.83e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.31e-25!15;UBERON:0001962!8.27e-17!2;UBERON:0001961!8.27e-17!2;UBERON:0001744!8.27e-17!2;UBERON:0004923!6.47e-16!24;UBERON:0001242!2.07e-15!13;UBERON:0000060!2.07e-15!13;UBERON:0001262!2.07e-15!13;UBERON:0004786!2.07e-15!13;UBERON:0003350!1.22e-14!9;UBERON:0004808!1.22e-14!9;UBERON:0001277!1.22e-14!9;UBERON:0000485!4.84e-12!11;UBERON:0002465!1.55e-11!3;UBERON:0003199!3.65e-09!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.20e-23,15;UBERON:0001962,4.89e-20,2;UBERON:0001961,4.89e-20,2;UBERON:0001744,4.89e-20,2;UBERON:0003350,1.27e-17,9;UBERON:0004808,1.27e-17,9;UBERON:0001277,1.27e-17,9;UBERON:0000485,1.68e-14,11;UBERON:0004923,1.80e-14,24;UBERON:0002465,1.04e-13,3;UBERON:0001242,2.46e-12,13;UBERON:0001262,2.46e-12,13;UBERON:0004786,2.46e-12,13;UBERON:0003199,8.99e-11,1 | |||
|phase1_expression=0,4.53668029931169,8.18998630901165,0,0,3.02182689441402,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19984845586813,2.2940928106717,5.16808767703518,4.73838195774982,5.60225204983311,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:86479683..86479693,- | |||
}} |
Revision as of 23:29, 12 September 2013
Short description: | p@chr12:86479683..86479693, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:86479683..86479693, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.30e-30 | 3 |
brush border epithelial cell | 3.59e-26 | 6 |
gut absorptive cell | 3.59e-26 | 6 |
enterocyte | 3.59e-26 | 6 |
columnar/cuboidal epithelial cell | 1.64e-22 | 7 |
epithelial cell | 4.62e-19 | 25 |
intestinal epithelial cell | 1.27e-17 | 9 |
epithelial cell of alimentary canal | 1.27e-17 | 9 |
defensive cell | 1.91e-13 | 7 |
endo-epithelial cell | 9.63e-11 | 15 |
endodermal cell | 3.83e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.20e-23 | 15 |
gut-associated lymphoid tissue | 4.89e-20 | 2 |
mucosa-associated lymphoid tissue | 4.89e-20 | 2 |
lymphoid tissue | 4.89e-20 | 2 |
epithelium of mucosa | 1.27e-17 | 9 |
gastrointestinal system epithelium | 1.27e-17 | 9 |
intestinal epithelium | 1.27e-17 | 9 |
simple columnar epithelium | 1.68e-14 | 11 |
organ component layer | 1.80e-14 | 24 |
lymphoid system | 1.04e-13 | 3 |
intestinal mucosa | 2.46e-12 | 13 |
wall of intestine | 2.46e-12 | 13 |
gastrointestinal system mucosa | 2.46e-12 | 13 |
egg chamber | 8.99e-11 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.