FFCP PHASE1:Mm9::chr16:94646690..94646714,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22129|HGNC=|MCL_coexpression_id=186|UniProt=F6XYB0|association_with_transcript=-40bp_to_ENSMUST00000141176_5end|description=CAGE_peak_3_at_Ttc3_5end|id=chr16:94646690..94646714,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,2.33e-08,3;CL:0000117,1.64e-07,23;CL:0000337,1.64e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!3.43e-13!50;UBERON:0006238!3.43e-13!50;UBERON:0001049!7.49e-13!52;UBERON:0005068!7.49e-13!52;UBERON:0006241!7.49e-13!52;UBERON:0007135!7.49e-13!52;UBERON:0002616!8.58e-13!49;UBERON:0002346!1.78e-12!71;UBERON:0003075!1.78e-12!71;UBERON:0007284!1.78e-12!71;UBERON:0000033!2.79e-12!63;UBERON:0001017!5.96e-12!73;UBERON:0005743!5.96e-12!73;UBERON:0000073!3.13e-11!75;UBERON:0001016!3.13e-11!75;UBERON:0003056!3.24e-11!49;UBERON:0002020!1.43e-10!34;UBERON:0003080!1.53e-10!40;UBERON:0002780!5.01e-10!39;UBERON:0001890!5.01e-10!39;UBERON:0006240!5.01e-10!39;UBERON:0007811!2.99e-09!86;UBERON:0002791!5.95e-09!29;UBERON:0003528!5.95e-09!29;UBERON:0001893!5.95e-09!29;UBERON:0000153!7.29e-09!94;UBERON:0004121!9.08e-09!102;UBERON:0000924!9.08e-09!102;UBERON:0006601!9.08e-09!102;UBERON:0002021!1.03e-07!10;UBERON:0000411!1.03e-07!10;UBERON:0001950!1.03e-07!10;UBERON:0000956!2.78e-07!21;UBERON:0001869!2.78e-07!21;UBERON:0000203!2.78e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.96e-20,54;UBERON:0002021,7.02e-20,10;UBERON:0000411,7.02e-20,10;UBERON:0001950,7.02e-20,10;UBERON:0002020,2.47e-18,34;UBERON:0003528,1.09e-16,29;UBERON:0002791,1.09e-16,29;UBERON:0001893,1.09e-16,29;UBERON:0001049,2.95e-15,52;UBERON:0005068,2.95e-15,52;UBERON:0006241,2.95e-15,52;UBERON:0007135,2.95e-15,52;UBERON:0000956,4.87e-15,21;UBERON:0001869,4.87e-15,21;UBERON:0000203,4.87e-15,21;UBERON:0001017,7.77e-15,73;UBERON:0001016,2.72e-14,75;UBERON:0002616,7.50e-14,46;UBERON:0002619,1.46e-13,17;UBERON:0000955,1.82e-13,47;UBERON:0006238,1.82e-13,47;UBERON:0003080,9.24e-13,40;UBERON:0002780,1.62e-11,39;UBERON:0001890,1.62e-11,39;UBERON:0006240,1.62e-11,39;UBERON:0002346,1.63e-11,64;UBERON:0003075,1.63e-11,64;UBERON:0007284,1.63e-11,64;UBERON:0004121,4.05e-10,95;UBERON:0000924,4.05e-10,95;UBERON:0006601,4.05e-10,95;UBERON:0003056,9.57e-10,49;UBERON:0010371,1.59e-09,73;UBERON:0004684,2.33e-08,3;UBERON:0002275,2.33e-08,3;UBERON:0010314,1.58e-07,92;UBERON:0000025,9.45e-07,114|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0.286533439938757,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,1.24427534770173,0.675029691658453,0,0.285650984403804,0.220868540951614,0.734944795289724,0.479227355091182,0,1.10115880999389,1.78762273319263,2.91852413186863,0.395658863190582,1.73826522844578,0,0.279182999001381,0.56276261003168,2.13917546887534,2.35702868378934,2.84743361598206,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0.448026887097336,0,0.170430322578058,0.519572009205738,0,0.14084341977668,1.28326477414318,0,0,0.432982082022428,0,1.01104889002957,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.60289056221049,0.470354828542819,0,0,0,0,0.485300549842228,0.220841518460394,0,0,0.585561594023094,1.67557365450764,0,0,0,0,1.19832511523858,0.457500602818626,1.7591609295801,1.04294592115366,1.02286182932132,0,0.648965052271031,0.203678727700633,0.497627882440372,0,0,0.650602214813519,0.459804208866946,0.180062129805349,0.90422890701429,0.272145996605311,0.384341160854549,0.468508622798644,0.258703370739016,0.646703978798527,0.189106080167819,0.527853372491847,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0,0.703578179943289,0.180062061461015,0,0,1.3884040159864,0.232533944750408,0.268273401399619,0.467061369468678,0.493679549740441,0.985004784474571,0,0.438599962275997,0.439100230582101,0.268412837520744,0.420579897128254,1.44066457330998,0,0.264450566663544,1.06644125267617,1.39342003116263,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0.898819408654221,0.648414149624083,0.199141273254367,0.189667900953082,0.456994050438915,0,1.22190796707189,0.581857461502877,0.0701358198903186,0.0632365371242573,0.295220295959204,0.470996183524124,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.162135226775035,0,7.18841032636773,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0,0,1.35796068620151,0.469380496577004,0.335012514883631,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,1.28440471990234,0.586058432961016,0.491804836130026,0,0.315508219416257,0,0.430846795465598,0.477937595905104,0.445597348164788,0.566153061577665,0,0.292255857911312,0,0.642642632843614,0,0.178065603667255,0.651547837414304,0.164970122972535,0,0.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| ||
|EntrezGene=22129 | |||
|HGNC= | |||
|MCL_coexpression_id=186 | |||
|UniProt=F6XYB0 | |||
|association_with_transcript=-40bp_to_ENSMUST00000141176_5end | |||
|description=CAGE_peak_3_at_Ttc3_5end | |||
|id=chr16:94646690..94646714,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.33e-08,3;CL:0000117,1.64e-07,23;CL:0000337,1.64e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!3.43e-13!50;UBERON:0006238!3.43e-13!50;UBERON:0001049!7.49e-13!52;UBERON:0005068!7.49e-13!52;UBERON:0006241!7.49e-13!52;UBERON:0007135!7.49e-13!52;UBERON:0002616!8.58e-13!49;UBERON:0002346!1.78e-12!71;UBERON:0003075!1.78e-12!71;UBERON:0007284!1.78e-12!71;UBERON:0000033!2.79e-12!63;UBERON:0001017!5.96e-12!73;UBERON:0005743!5.96e-12!73;UBERON:0000073!3.13e-11!75;UBERON:0001016!3.13e-11!75;UBERON:0003056!3.24e-11!49;UBERON:0002020!1.43e-10!34;UBERON:0003080!1.53e-10!40;UBERON:0002780!5.01e-10!39;UBERON:0001890!5.01e-10!39;UBERON:0006240!5.01e-10!39;UBERON:0007811!2.99e-09!86;UBERON:0002791!5.95e-09!29;UBERON:0003528!5.95e-09!29;UBERON:0001893!5.95e-09!29;UBERON:0000153!7.29e-09!94;UBERON:0004121!9.08e-09!102;UBERON:0000924!9.08e-09!102;UBERON:0006601!9.08e-09!102;UBERON:0002021!1.03e-07!10;UBERON:0000411!1.03e-07!10;UBERON:0001950!1.03e-07!10;UBERON:0000956!2.78e-07!21;UBERON:0001869!2.78e-07!21;UBERON:0000203!2.78e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.96e-20,54;UBERON:0002021,7.02e-20,10;UBERON:0000411,7.02e-20,10;UBERON:0001950,7.02e-20,10;UBERON:0002020,2.47e-18,34;UBERON:0003528,1.09e-16,29;UBERON:0002791,1.09e-16,29;UBERON:0001893,1.09e-16,29;UBERON:0001049,2.95e-15,52;UBERON:0005068,2.95e-15,52;UBERON:0006241,2.95e-15,52;UBERON:0007135,2.95e-15,52;UBERON:0000956,4.87e-15,21;UBERON:0001869,4.87e-15,21;UBERON:0000203,4.87e-15,21;UBERON:0001017,7.77e-15,73;UBERON:0001016,2.72e-14,75;UBERON:0002616,7.50e-14,46;UBERON:0002619,1.46e-13,17;UBERON:0000955,1.82e-13,47;UBERON:0006238,1.82e-13,47;UBERON:0003080,9.24e-13,40;UBERON:0002780,1.62e-11,39;UBERON:0001890,1.62e-11,39;UBERON:0006240,1.62e-11,39;UBERON:0002346,1.63e-11,64;UBERON:0003075,1.63e-11,64;UBERON:0007284,1.63e-11,64;UBERON:0004121,4.05e-10,95;UBERON:0000924,4.05e-10,95;UBERON:0006601,4.05e-10,95;UBERON:0003056,9.57e-10,49;UBERON:0010371,1.59e-09,73;UBERON:0004684,2.33e-08,3;UBERON:0002275,2.33e-08,3;UBERON:0010314,1.58e-07,92;UBERON:0000025,9.45e-07,114 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0.286533439938757,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,1.24427534770173,0.675029691658453,0,0.285650984403804,0.220868540951614,0.734944795289724,0.479227355091182,0,1.10115880999389,1.78762273319263,2.91852413186863,0.395658863190582,1.73826522844578,0,0.279182999001381,0.56276261003168,2.13917546887534,2.35702868378934,2.84743361598206,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0.448026887097336,0,0.170430322578058,0.519572009205738,0,0.14084341977668,1.28326477414318,0,0,0.432982082022428,0,1.01104889002957,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.60289056221049,0.470354828542819,0,0,0,0,0.485300549842228,0.220841518460394,0,0,0.585561594023094,1.67557365450764,0,0,0,0,1.19832511523858,0.457500602818626,1.7591609295801,1.04294592115366,1.02286182932132,0,0.648965052271031,0.203678727700633,0.497627882440372,0,0,0.650602214813519,0.459804208866946,0.180062129805349,0.90422890701429,0.272145996605311,0.384341160854549,0.468508622798644,0.258703370739016,0.646703978798527,0.189106080167819,0.527853372491847,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0,0.703578179943289,0.180062061461015,0,0,1.3884040159864,0.232533944750408,0.268273401399619,0.467061369468678,0.493679549740441,0.985004784474571,0,0.438599962275997,0.439100230582101,0.268412837520744,0.420579897128254,1.44066457330998,0,0.264450566663544,1.06644125267617,1.39342003116263,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0.898819408654221,0.648414149624083,0.199141273254367,0.189667900953082,0.456994050438915,0,1.22190796707189,0.581857461502877,0.0701358198903186,0.0632365371242573,0.295220295959204,0.470996183524124,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.162135226775035,0,7.18841032636773,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0,0,1.35796068620151,0.469380496577004,0.335012514883631,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,1.28440471990234,0.586058432961016,0.491804836130026,0,0.315508219416257,0,0.430846795465598,0.477937595905104,0.445597348164788,0.566153061577665,0,0.292255857911312,0,0.642642632843614,0,0.178065603667255,0.651547837414304,0.164970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0,0.643011105094777,0.709360934569094,0.891844088010353,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.370850604021019,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0.228778173206523,0.169978429993855,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0.540026704109006,0,0.87345025498471,0.269728692769641,0.247960367176008,0,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0.388902376688095,0,0.844780627453891,0.352071715937262,0.5208175393758,0.314578033277133,0.483168241652012,0,0.316011120628178,0,0.205421914329655,0.51968329191118,0,0.39736270956253,0.240390899039938,0.295379054349154,0.504832249740738,0.15241361331,0.403304740547362,0.292373642219257,0.192423683280659,0.467507608726276,0,0,0.0897138566094757,0,0,0,0.36630324853453,0.214368379079066,0,5.0827665835536,1.38097570952153,0.572895513439397,1.3748254587495,2.74033007908257,1.5107877947794,2.02506750069542,2.2516060161211,1.35942722695261,1.55328093525546,0.62272408550506,0,0.341467211508268,0.243106717068294,0,0.367687016900028,0.44449345560323,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.754505365544305,0.37456602987953,0.128050304809739,0.229741875822453,0.952587382566147,0.579421629724277,0.192909220463705,0,0.735994600671987,1.37147700954166,0.887379030796687,0.476872379894642,0.436039249896986,0.0941093804153306,0.761531471025089,0.365855945745545,1.05227884575137,0.271608227691724,1.12228454331548,0.237270036248348,0.591026894253381,2.04615521584845,0.154936841185966,0.578719832943424,0,0.233931608445408,0,0.382576664137687,0,0 | |||
|short_description=p3@Ttc3 | |||
}} |
Revision as of 13:23, 13 September 2013
Short description: | p3@Ttc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ttc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:186 |
Association with transcript: | -40bp_to_ENSMUST00000141176_5end |
EntrezGene: | Ttc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.33e-08 | 3 |
CNS neuron (sensu Vertebrata) | 1.64e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.64e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.