FFCP PHASE1:Mm9::chr12:114864234..114864248,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=1936|UniProt=|association_with_transcript=-67bp_to_ENSMUST00000103446_5end|description=CAGE_peak_1_at_ENSMUST00000103446_5end|id=chr12:114864234..114864248,-|ontology_enrichment_celltype=CL:0000553!1.04e-13!6;CL:0000556!1.04e-13!6;CL:0000050!4.92e-09!9;CL:0000414!2.50e-07!11|ontology_enrichment_celltype_v019_2=CL:0000553,1.44e-19,6;CL:0000556,1.44e-19,6;CL:0000050,3.62e-13,9;CL:0000839,3.31e-09,13;CL:0000945,2.44e-08,1;CL:0000236,2.44e-08,1;CL:0000826,2.44e-08,1;CL:0000763,1.58e-07,16;CL:0002031,3.25e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!3.39e-11!3;UBERON:0002193!2.37e-10!48;UBERON:0002106!1.38e-08!6;UBERON:0004457!1.38e-08!6;UBERON:0000042!1.38e-08!6;UBERON:0004854!1.38e-08!6;UBERON:0009034!1.38e-08!6;UBERON:0002095!1.38e-08!6;UBERON:0004782!1.38e-08!6;UBERON:0003281!1.38e-08!6;UBERON:0009664!1.38e-08!6;UBERON:0002296!1.38e-08!6;UBERON:0005602!1.38e-08!6;UBERON:0001179!1.38e-08!6;UBERON:0006293!1.38e-08!6;UBERON:0001962!4.72e-08!2;UBERON:0001961!4.72e-08!2;UBERON:0001744!4.72e-08!2|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.69e-23,3;UBERON:0001962,2.44e-16,2;UBERON:0001961,2.44e-16,2;UBERON:0001744,2.44e-16,2;UBERON:0002193,3.19e-09,48;UBERON:0002405,3.19e-09,48;UBERON:0003199,4.39e-09,1;UBERON:0000029,7.41e-09,1;UBERON:0001097,7.41e-09,1;UBERON:0003968,7.41e-09,1;UBERON:0001467,7.41e-09,1;UBERON:0001044,1.74e-08,1;UBERON:0001736,1.74e-08,1;UBERON:0003293,1.74e-08,1;UBERON:0003294,1.74e-08,1;UBERON:0001829,1.74e-08,1;UBERON:0010047,1.74e-08,1;UBERON:0000167,1.74e-08,1;UBERON:0006298,1.74e-08,1;UBERON:0002371,1.58e-07,16;UBERON:0007023,9.83e-07,51|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.41732687172878,0,4.25873923233621,2.74228867211478,2.54633791078818,0.425216450755349,0,0,6.39969691173627,15.1410125504332,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51004345451963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,5.69663344023778,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,12.517395705221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49565963328025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87957968877638,0,0.555583582109135,0.565105371014073,0.956859594047176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000103446}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=1936 | |||
|UniProt= | |||
|association_with_transcript=-67bp_to_ENSMUST00000103446_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000103446_5end | |||
|id=chr12:114864234..114864248,- | |||
|ontology_enrichment_celltype=CL:0000553!1.04e-13!6;CL:0000556!1.04e-13!6;CL:0000050!4.92e-09!9;CL:0000414!2.50e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.44e-19,6;CL:0000556,1.44e-19,6;CL:0000050,3.62e-13,9;CL:0000839,3.31e-09,13;CL:0000945,2.44e-08,1;CL:0000236,2.44e-08,1;CL:0000826,2.44e-08,1;CL:0000763,1.58e-07,16;CL:0002031,3.25e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!3.39e-11!3;UBERON:0002193!2.37e-10!48;UBERON:0002106!1.38e-08!6;UBERON:0004457!1.38e-08!6;UBERON:0000042!1.38e-08!6;UBERON:0004854!1.38e-08!6;UBERON:0009034!1.38e-08!6;UBERON:0002095!1.38e-08!6;UBERON:0004782!1.38e-08!6;UBERON:0003281!1.38e-08!6;UBERON:0009664!1.38e-08!6;UBERON:0002296!1.38e-08!6;UBERON:0005602!1.38e-08!6;UBERON:0001179!1.38e-08!6;UBERON:0006293!1.38e-08!6;UBERON:0001962!4.72e-08!2;UBERON:0001961!4.72e-08!2;UBERON:0001744!4.72e-08!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.69e-23,3;UBERON:0001962,2.44e-16,2;UBERON:0001961,2.44e-16,2;UBERON:0001744,2.44e-16,2;UBERON:0002193,3.19e-09,48;UBERON:0002405,3.19e-09,48;UBERON:0003199,4.39e-09,1;UBERON:0000029,7.41e-09,1;UBERON:0001097,7.41e-09,1;UBERON:0003968,7.41e-09,1;UBERON:0001467,7.41e-09,1;UBERON:0001044,1.74e-08,1;UBERON:0001736,1.74e-08,1;UBERON:0003293,1.74e-08,1;UBERON:0003294,1.74e-08,1;UBERON:0001829,1.74e-08,1;UBERON:0010047,1.74e-08,1;UBERON:0000167,1.74e-08,1;UBERON:0006298,1.74e-08,1;UBERON:0002371,1.58e-07,16;UBERON:0007023,9.83e-07,51 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.41732687172878,0,4.25873923233621,2.74228867211478,2.54633791078818,0.425216450755349,0,0,6.39969691173627,15.1410125504332,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51004345451963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,5.69663344023778,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,12.517395705221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49565963328025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87957968877638,0,0.555583582109135,0.565105371014073,0.956859594047176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000103446 | |||
}} |
Revision as of 22:28, 12 September 2013
Short description: | p1@ENSMUST00000103446 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103446_5end |
Coexpression cluster: | MCL_coexpression_mm9:1936 |
Association with transcript: | -67bp_to_ENSMUST00000103446_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.44e-19 | 6 |
megakaryocyte | 1.44e-19 | 6 |
megakaryocyte-erythroid progenitor cell | 3.62e-13 | 9 |
myeloid lineage restricted progenitor cell | 3.31e-09 | 13 |
lymphocyte of B lineage | 2.44e-08 | 1 |
B cell | 2.44e-08 | 1 |
pro-B cell | 2.44e-08 | 1 |
myeloid cell | 1.58e-07 | 16 |
hematopoietic lineage restricted progenitor cell | 3.25e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.69e-23 | 3 |
gut-associated lymphoid tissue | 2.44e-16 | 2 |
mucosa-associated lymphoid tissue | 2.44e-16 | 2 |
lymphoid tissue | 2.44e-16 | 2 |
hemolymphoid system | 3.19e-09 | 48 |
immune system | 3.19e-09 | 48 |
egg chamber | 4.39e-09 | 1 |
lymph node | 7.41e-09 | 1 |
axillary lymph node | 7.41e-09 | 1 |
peripheral lymph node | 7.41e-09 | 1 |
shoulder | 7.41e-09 | 1 |
saliva-secreting gland | 1.74e-08 | 1 |
submandibular gland | 1.74e-08 | 1 |
gland of oral region | 1.74e-08 | 1 |
gland of foregut | 1.74e-08 | 1 |
major salivary gland | 1.74e-08 | 1 |
oral gland | 1.74e-08 | 1 |
oral cavity | 1.74e-08 | 1 |
submandibular gland primordium | 1.74e-08 | 1 |
bone marrow | 1.58e-07 | 16 |
adult organism | 9.83e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.