FFCP PHASE1:Mm9::chr7:144514443..144514468,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=618|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:144514443..144514468,-|id=chr7:144514443..144514468,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,1.66e-13,23;CL:0000337,1.66e-13,23;CL:0002612,5.74e-10,3;CL:0000120,1.03e-09,3;CL:0002613,4.73e-09,3;CL:0000540,1.06e-08,33;CL:0000047,1.06e-08,33;CL:0000031,1.06e-08,33;CL:0000404,1.06e-08,33;CL:0000393,5.20e-07,39;CL:0000211,5.20e-07,39;CL:0002611,7.17e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002240!1.42e-07!6;UBERON:0005174!1.42e-07!6;UBERON:0001137!1.42e-07!6;UBERON:0000970!2.81e-07!9;UBERON:0000019!2.81e-07!9;UBERON:0000047!2.81e-07!9;UBERON:0004088!2.81e-07!9;UBERON:0002104!2.81e-07!9;UBERON:0001456!2.81e-07!9;UBERON:0003072!2.81e-07!9;UBERON:0003071!2.81e-07!9;UBERON:0004128!2.81e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.43e-17,6;UBERON:0005174,1.43e-17,6;UBERON:0001137,1.43e-17,6;UBERON:0001948,3.29e-15,5;UBERON:0002315,3.29e-15,5;UBERON:0002257,5.74e-10,3;UBERON:0003076,2.12e-08,12;UBERON:0003057,2.12e-08,12;UBERON:0002256,7.17e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,8.9019242778223,8.99284664762456,10.1413024560989,0,0,0,0,0,0,0,0,0,0,7.14127461009509,6.18431914664518,0,0,0,0,0.127687338085188,0.153606533256243,3.69281605644543,3.20206752608434,3.12548022334056,0,0,0.30559649555362,15.0260578591571,11.2473627831291,17.5215479075783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0.150722640552623,0,0,0.741584903203122,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0,0,0.41557608911912,0,0.101839363850316,0,0,0.210441855886474,1.04096354370163,1.37941262660084,1.62055916824814,1.20563854268572,0.95251098811859,0.640568601424249,0.468508622798644,0.776110112217047,0.646703978798527,4.16033376369202,5.27853372491847,3.94552318369635,2.78047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0,0,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.162886959353576,0,0,0,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0,0.540183282093931,0,0,0.354680467284547,0,0.493647061806363,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,2.59595422814714,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0,0,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0.2604087696879,0.524296722128554,0.483168241652012,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.764384908931,2.79317411380722,2.04880326904961,0.972426868273176,1.67690530102386,1.2869045591501,0.222246727801615,1.03017528619447,0.962757628775446,1.26348605881899,1.77435509923168,0.943131706930381,0.37456602987953,0.704276676453562,0.689225627467359,0.952587382566147,0.579421629724277,0.578727661391115,0.824171801606613,1.03039244094078,1.02860775715625,0,0.715308569841963,0.290692833264657,0.564656282491984,0.930760686808441,0.365855945745545,0.789209134313529,1.08643291076689,0.561142271657738,0.949080144993393,1.18205378850676,0,0.929621047115796,1.35034627686799,1.49886346762768,0.701794825336225,0.644613162144895,0.57386499620653,0.441182838239031,0.231867835620421|short_description=p@chr7:144514443..144514468,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=618 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:144514443..144514468,- | |||
|id=chr7:144514443..144514468,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.66e-13,23;CL:0000337,1.66e-13,23;CL:0002612,5.74e-10,3;CL:0000120,1.03e-09,3;CL:0002613,4.73e-09,3;CL:0000540,1.06e-08,33;CL:0000047,1.06e-08,33;CL:0000031,1.06e-08,33;CL:0000404,1.06e-08,33;CL:0000393,5.20e-07,39;CL:0000211,5.20e-07,39;CL:0002611,7.17e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!1.42e-07!6;UBERON:0005174!1.42e-07!6;UBERON:0001137!1.42e-07!6;UBERON:0000970!2.81e-07!9;UBERON:0000019!2.81e-07!9;UBERON:0000047!2.81e-07!9;UBERON:0004088!2.81e-07!9;UBERON:0002104!2.81e-07!9;UBERON:0001456!2.81e-07!9;UBERON:0003072!2.81e-07!9;UBERON:0003071!2.81e-07!9;UBERON:0004128!2.81e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.43e-17,6;UBERON:0005174,1.43e-17,6;UBERON:0001137,1.43e-17,6;UBERON:0001948,3.29e-15,5;UBERON:0002315,3.29e-15,5;UBERON:0002257,5.74e-10,3;UBERON:0003076,2.12e-08,12;UBERON:0003057,2.12e-08,12;UBERON:0002256,7.17e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,8.9019242778223,8.99284664762456,10.1413024560989,0,0,0,0,0,0,0,0,0,0,7.14127461009509,6.18431914664518,0,0,0,0,0.127687338085188,0.153606533256243,3.69281605644543,3.20206752608434,3.12548022334056,0,0,0.30559649555362,15.0260578591571,11.2473627831291,17.5215479075783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0.150722640552623,0,0,0.741584903203122,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0,0,0.41557608911912,0,0.101839363850316,0,0,0.210441855886474,1.04096354370163,1.37941262660084,1.62055916824814,1.20563854268572,0.95251098811859,0.640568601424249,0.468508622798644,0.776110112217047,0.646703978798527,4.16033376369202,5.27853372491847,3.94552318369635,2.78047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0,0,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.162886959353576,0,0,0,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0,0.540183282093931,0,0,0.354680467284547,0,0.493647061806363,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,2.59595422814714,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0,0,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0.2604087696879,0.524296722128554,0.483168241652012,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.764384908931,2.79317411380722,2.04880326904961,0.972426868273176,1.67690530102386,1.2869045591501,0.222246727801615,1.03017528619447,0.962757628775446,1.26348605881899,1.77435509923168,0.943131706930381,0.37456602987953,0.704276676453562,0.689225627467359,0.952587382566147,0.579421629724277,0.578727661391115,0.824171801606613,1.03039244094078,1.02860775715625,0,0.715308569841963,0.290692833264657,0.564656282491984,0.930760686808441,0.365855945745545,0.789209134313529,1.08643291076689,0.561142271657738,0.949080144993393,1.18205378850676,0,0.929621047115796,1.35034627686799,1.49886346762768,0.701794825336225,0.644613162144895,0.57386499620653,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr7:144514443..144514468,- | |||
}} |
Revision as of 12:10, 14 September 2013
Short description: | p@chr7:144514443..144514468, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:144514443..144514468, - |
Coexpression cluster: | MCL_coexpression_mm9:618 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.66e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.66e-13 | 23 |
neuron of the ventral spinal cord | 5.74e-10 | 3 |
granule cell | 1.03e-09 | 3 |
striatum neuron | 4.73e-09 | 3 |
neuron | 1.06e-08 | 33 |
neuronal stem cell | 1.06e-08 | 33 |
neuroblast | 1.06e-08 | 33 |
electrically signaling cell | 1.06e-08 | 33 |
electrically responsive cell | 5.20e-07 | 39 |
electrically active cell | 5.20e-07 | 39 |
neuron of the dorsal spinal cord | 7.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.43e-17 | 6 |
dorsal region element | 1.43e-17 | 6 |
dorsum | 1.43e-17 | 6 |
regional part of spinal cord | 3.29e-15 | 5 |
gray matter of spinal cord | 3.29e-15 | 5 |
ventral horn of spinal cord | 5.74e-10 | 3 |
posterior neural tube | 2.12e-08 | 12 |
chordal neural plate | 2.12e-08 | 12 |
dorsal horn of spinal cord | 7.17e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.