FFCP PHASE1:Mm9::chr12:99812958..99812985,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72258|HGNC=|MCL_coexpression_id=22|UniProt=E9Q8H0,Q3LS20|association_with_transcript=-36bp_to_ENSMUST00000166918,uc007oqg.1_5end|description=CAGE_peak_1_at_Kcnk10_5end|id=chr12:99812958..99812985,-|ontology_enrichment_celltype=CL:0002319!1.95e-16!43;CL:0000221!2.36e-16!44;CL:0000133!2.36e-16!44;CL:0000117!1.04e-15!23;CL:0000337!1.04e-15!23;CL:0000540!4.42e-14!33;CL:0000047!4.42e-14!33;CL:0000031!4.42e-14!33;CL:0000404!4.42e-14!33;CL:0000055!7.74e-12!50;CL:0000393!6.27e-10!39;CL:0000211!6.27e-10!39|ontology_enrichment_celltype_v019_2=CL:0000117,9.33e-21,23;CL:0000337,9.33e-21,23;CL:0002319,2.11e-17,43;CL:0000221,8.68e-17,44;CL:0000133,8.68e-17,44;CL:0000540,1.60e-13,33;CL:0000047,1.60e-13,33;CL:0000031,1.60e-13,33;CL:0000404,1.60e-13,33;CL:0000393,2.33e-10,39;CL:0000211,2.33e-10,39;CL:0002609,5.28e-09,6;CL:0002321,2.88e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.99e-33!73;UBERON:0005743!4.99e-33!73;UBERON:0000073!5.20e-32!75;UBERON:0001016!5.20e-32!75;UBERON:0001049!1.50e-26!52;UBERON:0005068!1.50e-26!52;UBERON:0006241!1.50e-26!52;UBERON:0007135!1.50e-26!52;UBERON:0002346!8.20e-26!71;UBERON:0003075!8.20e-26!71;UBERON:0007284!8.20e-26!71;UBERON:0004121!9.57e-26!102;UBERON:0000924!9.57e-26!102;UBERON:0006601!9.57e-26!102;UBERON:0000955!4.29e-24!50;UBERON:0006238!4.29e-24!50;UBERON:0002616!1.60e-23!49;UBERON:0002020!3.05e-23!34;UBERON:0000033!2.58e-22!63;UBERON:0003080!2.26e-20!40;UBERON:0002780!3.72e-20!39;UBERON:0001890!3.72e-20!39;UBERON:0006240!3.72e-20!39;UBERON:0003056!4.26e-20!49;UBERON:0002791!1.66e-19!29;UBERON:0003528!1.66e-19!29;UBERON:0001893!1.66e-19!29;UBERON:0000956!2.54e-15!21;UBERON:0001869!2.54e-15!21;UBERON:0000203!2.54e-15!21;UBERON:0002619!2.18e-12!17;UBERON:0007811!3.63e-11!86;UBERON:0000153!6.97e-09!94;UBERON:0002021!8.95e-08!10;UBERON:0000411!8.95e-08!10;UBERON:0001950!8.95e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.11e-32,34;UBERON:0001017,1.73e-29,73;UBERON:0001016,2.82e-28,75;UBERON:0000073,2.29e-27,54;UBERON:0003528,1.81e-26,29;UBERON:0002791,1.81e-26,29;UBERON:0001893,1.81e-26,29;UBERON:0001049,5.62e-26,52;UBERON:0005068,5.62e-26,52;UBERON:0006241,5.62e-26,52;UBERON:0007135,5.62e-26,52;UBERON:0000956,5.10e-23,21;UBERON:0001869,5.10e-23,21;UBERON:0000203,5.10e-23,21;UBERON:0000955,2.89e-22,47;UBERON:0006238,2.89e-22,47;UBERON:0002616,1.81e-21,46;UBERON:0002780,6.32e-20,39;UBERON:0001890,6.32e-20,39;UBERON:0006240,6.32e-20,39;UBERON:0002346,7.12e-20,64;UBERON:0003075,7.12e-20,64;UBERON:0007284,7.12e-20,64;UBERON:0003080,3.50e-19,40;UBERON:0004121,5.03e-19,95;UBERON:0000924,5.03e-19,95;UBERON:0006601,5.03e-19,95;UBERON:0002619,1.96e-18,17;UBERON:0010371,7.14e-16,73;UBERON:0003056,6.56e-14,49;UBERON:0002021,3.00e-11,10;UBERON:0000411,3.00e-11,10;UBERON:0001950,3.00e-11,10;UBERON:0010314,3.88e-10,92;UBERON:0001954,1.37e-08,7;UBERON:0003022,1.37e-08,7;UBERON:0002421,1.37e-08,7;UBERON:0000349,1.37e-08,7;UBERON:0002600,1.37e-08,7;UBERON:0003076,2.52e-07,12;UBERON:0003057,2.52e-07,12;UBERON:0001948,7.59e-07,5;UBERON:0002315,7.59e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1192829754028,1.75748946187577,1.55543919259427,3.3596741190087,4.31257693094915,0.335565212115473,0,0,0,0,0,8.29497489524351,5.28990979272033,13.3104594736298,0.677689064138264,0,0,0,0,5.39280198933128,4.61061966385865,12.2353742524004,13.3655878948374,14.5124223332454,5.14171771926846,4.41737081903227,15.8013130987291,12.9391385874619,13.7882817991503,2.20231761998777,1.14918604276669,0.614426133024974,14.1118327871307,12.8997577479398,11.4600941522487,1.3959149950069,0.56276261003168,1.22238598221448,7.66034322231536,7.97281412474976,7.45597783301202,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.913396434936424,0.230615497256059,0.904335843315735,0.823120949949934,0,0,0,0,0,0,0,0,5.27005434620785,5.44561437714983,0,0,0.599902730993408,0,0.748953197024114,0.915001205637253,15.0785222535437,2.25971616249959,2.04572365864264,1.66230435647648,1.29793010454206,0,0,0,0,0.520481771850815,0.919608417733892,0.540186389416048,0.753524089178575,0.544291993210623,0.896796041993948,0.749613796477831,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,4.41608891984667,16.5676425930648,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0.596869416123452,0,0,0,0,0,0.685491075658373,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.64096361229084,0.163934945376675,0,0.315508219416257,0,1.72338718186239,0.477937595905104,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,2.24924921495265,0,0,0.162886959353576,0,0,0.971122544619926,0.302323556964751,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0.720244376125241,0.776152102696527,0.643011105094777,0,0.356737635204141,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0.206386867963223,0,0,0,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0,0,0,0,5.64751842617067,5.9842280745933,5.72895513439397,4.81188910562325,4.7955776383945,5.2877572817279,5.40018000185445,1.80128481289688,4.07828168085784,4.14208249401456,1.14166082342594,2.79317411380722,3.07320490357441,1.70174701947806,1.88651846365184,1.65459157605013,2.00022055021454,1.85431551515005,1.28367683836726,1.76888048234658,2.78827229879264,1.32038438970253,2.43467919421694,1.85672941974121,1.49332219284595,2.38146845641537,1.39061191133827,1.73618298417335,2.06042950401653,2.35518272215036,1.02860775715625,1.24233064311536,2.62279808942053,2.61623549938191,2.72917203204459,1.52306294205018,1.09756783723664,2.63069711437843,2.58027816307137,0.561142271657738,1.66089025373844,1.97008964751127,0.409231043169689,1.39443157067369,0.964533054905707,3.99696924700713,1.16965804222704,1.50409737833809,0,0.220591419119515,0.695603506861264|short_description=p1@Kcnk10}} | ||
|EntrezGene=72258 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=E9Q8H0,Q3LS20 | |||
|association_with_transcript=-36bp_to_ENSMUST00000166918,uc007oqg.1_5end | |||
|description=CAGE_peak_1_at_Kcnk10_5end | |||
|id=chr12:99812958..99812985,- | |||
|ontology_enrichment_celltype=CL:0002319!1.95e-16!43;CL:0000221!2.36e-16!44;CL:0000133!2.36e-16!44;CL:0000117!1.04e-15!23;CL:0000337!1.04e-15!23;CL:0000540!4.42e-14!33;CL:0000047!4.42e-14!33;CL:0000031!4.42e-14!33;CL:0000404!4.42e-14!33;CL:0000055!7.74e-12!50;CL:0000393!6.27e-10!39;CL:0000211!6.27e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.33e-21,23;CL:0000337,9.33e-21,23;CL:0002319,2.11e-17,43;CL:0000221,8.68e-17,44;CL:0000133,8.68e-17,44;CL:0000540,1.60e-13,33;CL:0000047,1.60e-13,33;CL:0000031,1.60e-13,33;CL:0000404,1.60e-13,33;CL:0000393,2.33e-10,39;CL:0000211,2.33e-10,39;CL:0002609,5.28e-09,6;CL:0002321,2.88e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.99e-33!73;UBERON:0005743!4.99e-33!73;UBERON:0000073!5.20e-32!75;UBERON:0001016!5.20e-32!75;UBERON:0001049!1.50e-26!52;UBERON:0005068!1.50e-26!52;UBERON:0006241!1.50e-26!52;UBERON:0007135!1.50e-26!52;UBERON:0002346!8.20e-26!71;UBERON:0003075!8.20e-26!71;UBERON:0007284!8.20e-26!71;UBERON:0004121!9.57e-26!102;UBERON:0000924!9.57e-26!102;UBERON:0006601!9.57e-26!102;UBERON:0000955!4.29e-24!50;UBERON:0006238!4.29e-24!50;UBERON:0002616!1.60e-23!49;UBERON:0002020!3.05e-23!34;UBERON:0000033!2.58e-22!63;UBERON:0003080!2.26e-20!40;UBERON:0002780!3.72e-20!39;UBERON:0001890!3.72e-20!39;UBERON:0006240!3.72e-20!39;UBERON:0003056!4.26e-20!49;UBERON:0002791!1.66e-19!29;UBERON:0003528!1.66e-19!29;UBERON:0001893!1.66e-19!29;UBERON:0000956!2.54e-15!21;UBERON:0001869!2.54e-15!21;UBERON:0000203!2.54e-15!21;UBERON:0002619!2.18e-12!17;UBERON:0007811!3.63e-11!86;UBERON:0000153!6.97e-09!94;UBERON:0002021!8.95e-08!10;UBERON:0000411!8.95e-08!10;UBERON:0001950!8.95e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.11e-32,34;UBERON:0001017,1.73e-29,73;UBERON:0001016,2.82e-28,75;UBERON:0000073,2.29e-27,54;UBERON:0003528,1.81e-26,29;UBERON:0002791,1.81e-26,29;UBERON:0001893,1.81e-26,29;UBERON:0001049,5.62e-26,52;UBERON:0005068,5.62e-26,52;UBERON:0006241,5.62e-26,52;UBERON:0007135,5.62e-26,52;UBERON:0000956,5.10e-23,21;UBERON:0001869,5.10e-23,21;UBERON:0000203,5.10e-23,21;UBERON:0000955,2.89e-22,47;UBERON:0006238,2.89e-22,47;UBERON:0002616,1.81e-21,46;UBERON:0002780,6.32e-20,39;UBERON:0001890,6.32e-20,39;UBERON:0006240,6.32e-20,39;UBERON:0002346,7.12e-20,64;UBERON:0003075,7.12e-20,64;UBERON:0007284,7.12e-20,64;UBERON:0003080,3.50e-19,40;UBERON:0004121,5.03e-19,95;UBERON:0000924,5.03e-19,95;UBERON:0006601,5.03e-19,95;UBERON:0002619,1.96e-18,17;UBERON:0010371,7.14e-16,73;UBERON:0003056,6.56e-14,49;UBERON:0002021,3.00e-11,10;UBERON:0000411,3.00e-11,10;UBERON:0001950,3.00e-11,10;UBERON:0010314,3.88e-10,92;UBERON:0001954,1.37e-08,7;UBERON:0003022,1.37e-08,7;UBERON:0002421,1.37e-08,7;UBERON:0000349,1.37e-08,7;UBERON:0002600,1.37e-08,7;UBERON:0003076,2.52e-07,12;UBERON:0003057,2.52e-07,12;UBERON:0001948,7.59e-07,5;UBERON:0002315,7.59e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1192829754028,1.75748946187577,1.55543919259427,3.3596741190087,4.31257693094915,0.335565212115473,0,0,0,0,0,8.29497489524351,5.28990979272033,13.3104594736298,0.677689064138264,0,0,0,0,5.39280198933128,4.61061966385865,12.2353742524004,13.3655878948374,14.5124223332454,5.14171771926846,4.41737081903227,15.8013130987291,12.9391385874619,13.7882817991503,2.20231761998777,1.14918604276669,0.614426133024974,14.1118327871307,12.8997577479398,11.4600941522487,1.3959149950069,0.56276261003168,1.22238598221448,7.66034322231536,7.97281412474976,7.45597783301202,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.913396434936424,0.230615497256059,0.904335843315735,0.823120949949934,0,0,0,0,0,0,0,0,5.27005434620785,5.44561437714983,0,0,0.599902730993408,0,0.748953197024114,0.915001205637253,15.0785222535437,2.25971616249959,2.04572365864264,1.66230435647648,1.29793010454206,0,0,0,0,0.520481771850815,0.919608417733892,0.540186389416048,0.753524089178575,0.544291993210623,0.896796041993948,0.749613796477831,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,4.41608891984667,16.5676425930648,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0.596869416123452,0,0,0,0,0,0.685491075658373,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.64096361229084,0.163934945376675,0,0.315508219416257,0,1.72338718186239,0.477937595905104,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,2.24924921495265,0,0,0.162886959353576,0,0,0.971122544619926,0.302323556964751,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0.720244376125241,0.776152102696527,0.643011105094777,0,0.356737635204141,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0.206386867963223,0,0,0,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0,0,0,0,5.64751842617067,5.9842280745933,5.72895513439397,4.81188910562325,4.7955776383945,5.2877572817279,5.40018000185445,1.80128481289688,4.07828168085784,4.14208249401456,1.14166082342594,2.79317411380722,3.07320490357441,1.70174701947806,1.88651846365184,1.65459157605013,2.00022055021454,1.85431551515005,1.28367683836726,1.76888048234658,2.78827229879264,1.32038438970253,2.43467919421694,1.85672941974121,1.49332219284595,2.38146845641537,1.39061191133827,1.73618298417335,2.06042950401653,2.35518272215036,1.02860775715625,1.24233064311536,2.62279808942053,2.61623549938191,2.72917203204459,1.52306294205018,1.09756783723664,2.63069711437843,2.58027816307137,0.561142271657738,1.66089025373844,1.97008964751127,0.409231043169689,1.39443157067369,0.964533054905707,3.99696924700713,1.16965804222704,1.50409737833809,0,0.220591419119515,0.695603506861264 | |||
|short_description=p1@Kcnk10 | |||
}} |
Revision as of 23:38, 12 September 2013
Short description: | p1@Kcnk10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kcnk10_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -36bp_to_ENSMUST00000166918, uc007oqg.1_5end |
EntrezGene: | Kcnk10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.33e-21 | 23 |
neuroblast (sensu Vertebrata) | 9.33e-21 | 23 |
neural cell | 2.11e-17 | 43 |
ectodermal cell | 8.68e-17 | 44 |
neurectodermal cell | 8.68e-17 | 44 |
neuron | 1.60e-13 | 33 |
neuronal stem cell | 1.60e-13 | 33 |
neuroblast | 1.60e-13 | 33 |
electrically signaling cell | 1.60e-13 | 33 |
electrically responsive cell | 2.33e-10 | 39 |
electrically active cell | 2.33e-10 | 39 |
neuron of cerebral cortex | 5.28e-09 | 6 |
embryonic cell | 2.88e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.