FFCP PHASE1:Mm9::chr2:154395552..154395561,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=13555|HGNC=|UniProt=Q547J6,Q61501|association_with_transcript=26bp_to_NM_007891,uc008njk.1_5end|description=CAGE_peak_3_at_E2f1_5end|id=chr2:154395552..154395561,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000970,9.38e-09,9;UBERON:0000019,9.38e-09,9;UBERON:0000047,9.38e-09,9;UBERON:0010312,9.38e-09,9;UBERON:0004088,9.38e-09,9;UBERON:0002104,9.38e-09,9;UBERON:0001456,9.38e-09,9;UBERON:0003072,9.38e-09,9;UBERON:0004128,9.38e-09,9;UBERON:0003071,9.38e-09,9;UBERON:0001444,6.66e-07,11|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,1.39912375625629,0.157731082679119,0.274228867211478,0,0,0.794327609607082,2.08959831311148,0,0.22940928106717,0,0,0,0.190023419456374,0,0.443461021310609,0.635030673459631,1.23012957516914,0,0.288851619751275,1.16364251750945,1.22501613757421,0.418531630736908,0.7813353445238,0.523523743973798,0,0,0.971020706062307,0.125896817975577,0.202753862439029,0,1.56478268869608,1.09012578190223,0.659058548203415,0.194429899074283,0.55994568650145,0,0.167782606057736,0,0,0.257259436035947,0.286533439938757,0,0.606949382578793,1.05798195854407,0.633831403506179,1.0165335962074,2.66788438833342,0.899899717281399,0,1.4209602298922,1.19840044207362,0.384218305321555,1.14058573539325,1.21505344498522,1.47227472945967,0.571301968807607,0,0.979926393719632,0.958454710182364,0,0,0,0.153606533256243,0.263772575460388,0.182975287204819,0,0,0,0,0.294628585473668,0.142371680799103,0.372798891650601,0.227178579999552,1.66257432234928,0,0,0.679971333707751,0,0,0,0,0.852151612890289,0.259786004602869,1.06001872353102,0.422530259330042,0,0,0,0.649473123033642,0.760079596425296,0,0.22836775943812,0,0,0.867426633830679,0.304465478312141,0.691846491768175,0.452167921657868,0.823120949949934,0.376999773989026,0,0,0.884610551949874,0.647067399789637,0.441683036920787,0.484875253135222,0,0,0,0,0.958520996047362,1.79970819298022,1.01656181658452,0,0,0.251308704225729,0.173824320192276,0,0.41557608911912,0,0.611036183101898,0.124406970610093,0,0,1.04096354370163,1.83921683546778,1.44049703844279,2.86339153887859,3.87808045162569,2.69038812598185,3.5606655332697,0,1.07783996466421,0.945530400839096,0,1.09597866213787,0.834141747676794,0.696504333044333,0.205782136407943,0.59710280045548,0.702213187313235,0.257347907114715,1.42081749697796,1.44988040774851,0.938104239924385,0.36012412292203,0.473489471170421,0.196764231747404,0.771335564436891,0.930135779001631,0.804820204198858,0,0.658239399653922,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0,0,0,0.639864751605702,0.696710015581316,0.902072229254653,0.605050573870028,0,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.948339504765408,0.913988100877831,2.25415471346161,0.407302655690628,0.387904974335251,0.280543279561274,0.442655759869801,0,0,0.123397163921801,0,1.33476084572875,1.76903095601883,0.899448449539415,1.01430060694251,1.4470629585145,1.01850340712568,0.575392274901621,0.486405680325106,1.09824565275233,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0.184753190166605,0.947457058852424,0.162964976442026,1.01847051465113,1.40814148973101,0.335012514883631,0.476087281772027,0.195133647857799,0.945810864637146,0.44292937929755,0,0,0.172684981865896,0.144649058581512,0,0.54390568381871,0.491764273019036,0.275936746304732,0,0.117211686592203,0.163934945376675,0,2.2085575359138,0.780877488593277,1.72338718186239,1.91175038362042,0.891194696329576,1.13230612315533,2.83367491172426,1.16902343164525,0.790575555893047,0,0.141940085208269,1.06839362200353,0.488660878060728,0.164970122972535,0,0.485561272309963,1.209294227859,0.188605079755898,1.18120757152309,0,0.258428293168221,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,1.26042765821917,0.646793418913773,0.643011105094777,0.532020700926821,0.535106452806212,0.493647061806363,0,0.23467170806371,0,0,0.32977250588296,0.484393280087717,0.361877549568935,0.358117032009409,0.164140899745061,0,0.556275906031529,0.341741761595705,1.03193433981611,0.370389054739423,0.376736914009382,0.27338845544205,0.915112692826091,0.849892149969277,0.419854356970974,0.829199842826543,0,0.632671987162271,0.406638934253697,0.972048067396211,0.627264888043406,0.87345025498471,0.539457385539283,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0.897099276263873,0.66183396182839,0.972255941720238,0.904118764344118,1.18269287843545,0.352071715937262,0.781226309063701,0.314578033277133,0.724752362478018,0,0.948033361884535,0.810900861160657,0.308132871494482,1.42912905275575,1.9692936523423,1.58945083825012,0.961563596159751,1.03382669022204,0.403865799792591,0.914481679859998,0.806609481094724,0.584747284438515,0.577271049841977,0.233753804363138,0,0.443971906748129,0.269141569828427,0,0,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0.93408612825759,2.39414924040619,1.53660245178721,2.18796045361465,1.88651846365184,0.919217542250071,0.666740183404846,0.618105171716683,0.962757628775446,0.758091635291392,0.50695859978048,0,0.842773567228942,0.512201219238954,0.689225627467359,0.952587382566147,0.695305955669133,0.578727661391115,0,0.883193520806384,0.685738504770831,0.532427418478012,0.715308569841963,0.581385666529314,0.658765662907314,0.846146078916765,0.548783918618318,0,0.407412341537585,1.68342681497322,0.355905054372522,0.591026894253381,0.818462086339379,1.08455788830176,1.15743966588685,0.499621155875892,0.935726433781634,0.644613162144895,0,0.220591419119515,0.463735671240843|short_description=p3@E2f1}} | ||
|EntrezGene=13555 | |||
|HGNC= | |||
|UniProt=Q547J6,Q61501 | |||
|association_with_transcript=26bp_to_NM_007891,uc008njk.1_5end | |||
|description=CAGE_peak_3_at_E2f1_5end | |||
|id=chr2:154395552..154395561,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,9.38e-09,9;UBERON:0000019,9.38e-09,9;UBERON:0000047,9.38e-09,9;UBERON:0010312,9.38e-09,9;UBERON:0004088,9.38e-09,9;UBERON:0002104,9.38e-09,9;UBERON:0001456,9.38e-09,9;UBERON:0003072,9.38e-09,9;UBERON:0004128,9.38e-09,9;UBERON:0003071,9.38e-09,9;UBERON:0001444,6.66e-07,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,1.39912375625629,0.157731082679119,0.274228867211478,0,0,0.794327609607082,2.08959831311148,0,0.22940928106717,0,0,0,0.190023419456374,0,0.443461021310609,0.635030673459631,1.23012957516914,0,0.288851619751275,1.16364251750945,1.22501613757421,0.418531630736908,0.7813353445238,0.523523743973798,0,0,0.971020706062307,0.125896817975577,0.202753862439029,0,1.56478268869608,1.09012578190223,0.659058548203415,0.194429899074283,0.55994568650145,0,0.167782606057736,0,0,0.257259436035947,0.286533439938757,0,0.606949382578793,1.05798195854407,0.633831403506179,1.0165335962074,2.66788438833342,0.899899717281399,0,1.4209602298922,1.19840044207362,0.384218305321555,1.14058573539325,1.21505344498522,1.47227472945967,0.571301968807607,0,0.979926393719632,0.958454710182364,0,0,0,0.153606533256243,0.263772575460388,0.182975287204819,0,0,0,0,0.294628585473668,0.142371680799103,0.372798891650601,0.227178579999552,1.66257432234928,0,0,0.679971333707751,0,0,0,0,0.852151612890289,0.259786004602869,1.06001872353102,0.422530259330042,0,0,0,0.649473123033642,0.760079596425296,0,0.22836775943812,0,0,0.867426633830679,0.304465478312141,0.691846491768175,0.452167921657868,0.823120949949934,0.376999773989026,0,0,0.884610551949874,0.647067399789637,0.441683036920787,0.484875253135222,0,0,0,0,0.958520996047362,1.79970819298022,1.01656181658452,0,0,0.251308704225729,0.173824320192276,0,0.41557608911912,0,0.611036183101898,0.124406970610093,0,0,1.04096354370163,1.83921683546778,1.44049703844279,2.86339153887859,3.87808045162569,2.69038812598185,3.5606655332697,0,1.07783996466421,0.945530400839096,0,1.09597866213787,0.834141747676794,0.696504333044333,0.205782136407943,0.59710280045548,0.702213187313235,0.257347907114715,1.42081749697796,1.44988040774851,0.938104239924385,0.36012412292203,0.473489471170421,0.196764231747404,0.771335564436891,0.930135779001631,0.804820204198858,0,0.658239399653922,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0,0,0,0.639864751605702,0.696710015581316,0.902072229254653,0.605050573870028,0,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.948339504765408,0.913988100877831,2.25415471346161,0.407302655690628,0.387904974335251,0.280543279561274,0.442655759869801,0,0,0.123397163921801,0,1.33476084572875,1.76903095601883,0.899448449539415,1.01430060694251,1.4470629585145,1.01850340712568,0.575392274901621,0.486405680325106,1.09824565275233,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0.184753190166605,0.947457058852424,0.162964976442026,1.01847051465113,1.40814148973101,0.335012514883631,0.476087281772027,0.195133647857799,0.945810864637146,0.44292937929755,0,0,0.172684981865896,0.144649058581512,0,0.54390568381871,0.491764273019036,0.275936746304732,0,0.117211686592203,0.163934945376675,0,2.2085575359138,0.780877488593277,1.72338718186239,1.91175038362042,0.891194696329576,1.13230612315533,2.83367491172426,1.16902343164525,0.790575555893047,0,0.141940085208269,1.06839362200353,0.488660878060728,0.164970122972535,0,0.485561272309963,1.209294227859,0.188605079755898,1.18120757152309,0,0.258428293168221,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,1.26042765821917,0.646793418913773,0.643011105094777,0.532020700926821,0.535106452806212,0.493647061806363,0,0.23467170806371,0,0,0.32977250588296,0.484393280087717,0.361877549568935,0.358117032009409,0.164140899745061,0,0.556275906031529,0.341741761595705,1.03193433981611,0.370389054739423,0.376736914009382,0.27338845544205,0.915112692826091,0.849892149969277,0.419854356970974,0.829199842826543,0,0.632671987162271,0.406638934253697,0.972048067396211,0.627264888043406,0.87345025498471,0.539457385539283,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0.897099276263873,0.66183396182839,0.972255941720238,0.904118764344118,1.18269287843545,0.352071715937262,0.781226309063701,0.314578033277133,0.724752362478018,0,0.948033361884535,0.810900861160657,0.308132871494482,1.42912905275575,1.9692936523423,1.58945083825012,0.961563596159751,1.03382669022204,0.403865799792591,0.914481679859998,0.806609481094724,0.584747284438515,0.577271049841977,0.233753804363138,0,0.443971906748129,0.269141569828427,0,0,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0.93408612825759,2.39414924040619,1.53660245178721,2.18796045361465,1.88651846365184,0.919217542250071,0.666740183404846,0.618105171716683,0.962757628775446,0.758091635291392,0.50695859978048,0,0.842773567228942,0.512201219238954,0.689225627467359,0.952587382566147,0.695305955669133,0.578727661391115,0,0.883193520806384,0.685738504770831,0.532427418478012,0.715308569841963,0.581385666529314,0.658765662907314,0.846146078916765,0.548783918618318,0,0.407412341537585,1.68342681497322,0.355905054372522,0.591026894253381,0.818462086339379,1.08455788830176,1.15743966588685,0.499621155875892,0.935726433781634,0.644613162144895,0,0.220591419119515,0.463735671240843 | |||
|short_description=p3@E2f1 | |||
}} |
Revision as of 22:32, 13 September 2013
Short description: | p3@E2f1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_E2f1_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_NM_007891, uc008njk.1_5end |
EntrezGene: | E2f1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 9.38e-09 | 9 |
camera-type eye | 9.38e-09 | 9 |
simple eye | 9.38e-09 | 9 |
immature eye | 9.38e-09 | 9 |
ocular region | 9.38e-09 | 9 |
visual system | 9.38e-09 | 9 |
face | 9.38e-09 | 9 |
optic cup | 9.38e-09 | 9 |
optic vesicle | 9.38e-09 | 9 |
eye primordium | 9.38e-09 | 9 |
subdivision of head | 6.66e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.