FFCP PHASE1:Mm9::chr4:57156550..57156604,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=54357|HGNC=|UniProt=Q9JMC8,A2ALK6|association_with_transcript=-241bp_to_ENSMUST00000030142,ENSMUST00000095076_5end|description=CAGE_peak_2_at_Epb4.1l4b_5end|id=chr4:57156550..57156604,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.12e-16!43;UBERON:0005409!1.66e-12!59;UBERON:0007023!2.18e-09!51;UBERON:0000344!2.78e-08!15;UBERON:0001242!4.65e-08!13;UBERON:0000060!4.65e-08!13;UBERON:0001262!4.65e-08!13;UBERON:0004786!4.65e-08!13;UBERON:0000485!4.87e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.49e-12,31;UBERON:0007023,7.57e-10,51;UBERON:0005409,2.03e-09,47;UBERON:0000344,1.67e-08,15;UBERON:0001242,2.84e-08,13;UBERON:0001262,2.84e-08,13;UBERON:0004786,2.84e-08,13;UBERON:0000485,3.22e-07,11|phase1_expression=4.96461426024861,17.7977457896074,16.3799726180233,19.9626379462508,19.0340377379612,7.89032577985882,7.70921713965235,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0.411343300817216,0,3.06155844543851,1.09220046320974,1.30599894569468,4.15980299262857,4.81759490241057,11.4846392823004,8.18447792702242,6.67960821326256,11.2113817479261,10.3332353201572,4.8780712344167,6.98533740805594,3.69038872550742,0,6.93243887403059,7.14808975041517,6.94175811292055,0,0,0,0,0,0,0.881277725829041,0.912392380975631,0.183546752161682,0.782391344348039,0.436050312760893,1.31811709640683,2.13872888981712,0,0,0.167782606057736,0,0,1.54355661621568,0.573066879877513,0,4.04632921719196,1.05798195854407,2.53532561402472,0,0.889294796111139,0,0,0,1.49800055259202,0.768436610643109,0.414758449233911,0.270011876663381,0,5.14171771926846,5.74258206474195,0.734944795289724,0.575072826109418,0,3.30347642998166,3.57524546638526,4.30098293117482,2.37395317914349,2.28719109006024,2.6045668527838,6.42120897703176,1.68828783009504,4.88954392885792,5.30331453852602,4.12877874317399,2.79599168737951,8.5570598466498,11.1845908958043,0.869593466105033,2.58127163094416,2.03991400112325,5.93673510801599,2.59910566979068,1.79210754838934,2.80888840263504,1.36344258062446,0.259786004602869,0.35333957451034,11.5491604216878,0,2.54805239706646,0,4.76280290224671,3.04031838570118,3.53867111510348,3.76806803072898,0,0,0.520455980298408,0.304465478312141,0.230615497256059,0.60289056221049,1.05829836422134,0.251333182659351,11.3709685157812,0.289198713839823,1.76922110389975,2.75003644910596,0.441683036920787,1.45462575940567,14.9113408974498,11.1256702864388,16.3368431314495,10.2182822083437,2.39630249011841,1.19980546198682,1.14363204365758,7.63932260964596,2.74500361691176,1.7591609295801,5.04090528557602,2.81287003063364,6.02585329222724,4.54275536589721,0.611036183101898,2.48813941220186,3.79084137650512,13.8891624885073,1.17108398666433,1.83921683546778,1.80062129805349,2.71268672104287,3.06164246180975,2.0498195245576,3.18585863503078,7.76110112217047,2.37124792226126,3.40390944302075,1.93546236580344,0.876782929710299,2.78047249225598,2.78601733217733,1.23469281844766,0.995171334092466,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0.540186184383045,0,0,0,0,1.3413670069981,0.583826711835847,0.658239399653922,0.32833492815819,0.648550476366846,0.730999937126662,0.439100230582101,0.671032093801859,3.36463917702604,0.823236899034275,8.92130714056255,7.40461586657924,1.06644125267617,1.85789337488351,4.63922860759536,4.84040459096022,3.7804267453628,5.51654315726422,5.21981967698963,6.0938613247884,5.27803938480566,8.15721535368718,4.48417400373976,5.39291645192533,5.40345124686736,5.77509692437665,0.948339504765408,1.14248512609729,1.1270773567308,1.01825663922657,1.16371492300575,2.80543279561274,2.71917109634306,3.39503340353085,1.255989822731,1.85095745882701,5.92905254174298,0.333690211432188,0.589676985339609,0.449724224769707,0.202860121388503,1.4470629585145,1.52775511068852,1.43848068725405,0.810676133875177,1.64736847912849,1.43768206527355,1.48856379067401,2.80833905803104,3.53610429125956,3.58794827043824,0.964887042726734,4.24932337383191,0.947457058852424,0.162964976442026,0.339490171550376,0.938760993154008,3.51763140627813,4.04674189506223,5.07347484430277,2.83743259391144,3.76489972402917,2.71073106717728,4.58817281204066,2.07221978239075,4.77341893318988,0,0,12.2941068254759,11.313406598494,7.22477654945064,8.08760637486202,0,1.76729649043061,6.62567260774139,6.24701990874622,6.24727853425117,11.9484398976276,10.4715376818725,11.6061377623421,6.47697122679831,6.42962887404886,5.53402889125133,3.21321316421807,2.83880170416537,1.42452482933804,1.95464351224291,2.96946221350564,15.9294166007955,1.69946445308487,2.11626489875326,4.90373207365335,7.67784921490009,8.9156192903739,6.46070732920553,6.5436071305951,3.92147116223193,8.53299246426703,16.8669773719998,15.470331487228,2.38307724027652,0.36012218806262,0.776152102696527,0.643011105094777,0.886701168211368,1.07021290561242,1.31639216481697,2.74018454203139,1.87737366450968,2.96564899209348,8.82113592219848,4.9465875882444,4.52100394748536,5.36785031860587,6.92359595218192,6.89391778929257,9.32738677215522,9.6421157045465,0,0.412773735926445,0,0.188368457004691,0.27338845544205,0,3.0596117398894,1.39951452323658,1.52019971184866,6.68269432610579,1.10717597753397,1.42323626988794,3.88819226958485,3.97267762427491,5.8957892211468,5.39457385539283,6.28166263512553,7.32916637555283,9.98035294346805,13.6694648879124,0.56369293868419,1.19613236835183,0.165458490457098,0.972255941720238,0,0.337912250981556,0.704143431874524,2.73429208172295,4.08951443260272,1.20792060413003,1.44015003128933,0.632022241256357,1.21635129174099,1.02710957164827,0.25984164595559,0.537080087002444,0,0.240390899039938,0.147689527174577,0.605798699688886,0.228620419965,0.604957110821043,0.487289403698762,0.673482891482306,0.350630706544707,7.02864189207155,0.665957860122194,0.538283139656854,0.335769232728157,7.34120457322324,5.2551093126331,8.24182309202693,9.00347192132076,16.551879433167,3.3885110557024,0.920650473014354,2.86447756719698,1.89038500578056,6.16574267793578,3.7769694869485,2.70009000092722,3.15224842256954,1.35942722695261,4.65984280576638,0.93408612825759,1.99512436700516,2.04880326904961,1.21553358534147,1.67690530102386,2.38996560985018,2.66696073361938,3.91466608753899,3.85103051510178,4.54854981174835,4.56262739802432,2.45214243801899,2.62196220915671,3.52138338226781,2.64203157195821,3.81034953026459,4.05595140806994,3.6652751888104,2.47251540481984,3.23837624295674,2.74295401908332,2.30718548007139,2.62279808942053,3.0522747492789,3.3879376949519,2.70766745253365,2.74391959309159,2.89376682581627,2.44447404922551,2.24456908663095,3.44041552560105,3.64466584789585,2.86461730218783,2.63392630016142,3.2794123866794,1.99848462350357,2.8071793013449,4.08255002691767,2.10417165275728,3.97064554415128,1.15933917810211|short_description=p2@Epb4.1l4b}} | ||
|EntrezGene=54357 | |||
|HGNC= | |||
|UniProt=Q9JMC8,A2ALK6 | |||
|association_with_transcript=-241bp_to_ENSMUST00000030142,ENSMUST00000095076_5end | |||
|description=CAGE_peak_2_at_Epb4.1l4b_5end | |||
|id=chr4:57156550..57156604,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.12e-16!43;UBERON:0005409!1.66e-12!59;UBERON:0007023!2.18e-09!51;UBERON:0000344!2.78e-08!15;UBERON:0001242!4.65e-08!13;UBERON:0000060!4.65e-08!13;UBERON:0001262!4.65e-08!13;UBERON:0004786!4.65e-08!13;UBERON:0000485!4.87e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.49e-12,31;UBERON:0007023,7.57e-10,51;UBERON:0005409,2.03e-09,47;UBERON:0000344,1.67e-08,15;UBERON:0001242,2.84e-08,13;UBERON:0001262,2.84e-08,13;UBERON:0004786,2.84e-08,13;UBERON:0000485,3.22e-07,11 | |||
|phase1_expression=4.96461426024861,17.7977457896074,16.3799726180233,19.9626379462508,19.0340377379612,7.89032577985882,7.70921713965235,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0.411343300817216,0,3.06155844543851,1.09220046320974,1.30599894569468,4.15980299262857,4.81759490241057,11.4846392823004,8.18447792702242,6.67960821326256,11.2113817479261,10.3332353201572,4.8780712344167,6.98533740805594,3.69038872550742,0,6.93243887403059,7.14808975041517,6.94175811292055,0,0,0,0,0,0,0.881277725829041,0.912392380975631,0.183546752161682,0.782391344348039,0.436050312760893,1.31811709640683,2.13872888981712,0,0,0.167782606057736,0,0,1.54355661621568,0.573066879877513,0,4.04632921719196,1.05798195854407,2.53532561402472,0,0.889294796111139,0,0,0,1.49800055259202,0.768436610643109,0.414758449233911,0.270011876663381,0,5.14171771926846,5.74258206474195,0.734944795289724,0.575072826109418,0,3.30347642998166,3.57524546638526,4.30098293117482,2.37395317914349,2.28719109006024,2.6045668527838,6.42120897703176,1.68828783009504,4.88954392885792,5.30331453852602,4.12877874317399,2.79599168737951,8.5570598466498,11.1845908958043,0.869593466105033,2.58127163094416,2.03991400112325,5.93673510801599,2.59910566979068,1.79210754838934,2.80888840263504,1.36344258062446,0.259786004602869,0.35333957451034,11.5491604216878,0,2.54805239706646,0,4.76280290224671,3.04031838570118,3.53867111510348,3.76806803072898,0,0,0.520455980298408,0.304465478312141,0.230615497256059,0.60289056221049,1.05829836422134,0.251333182659351,11.3709685157812,0.289198713839823,1.76922110389975,2.75003644910596,0.441683036920787,1.45462575940567,14.9113408974498,11.1256702864388,16.3368431314495,10.2182822083437,2.39630249011841,1.19980546198682,1.14363204365758,7.63932260964596,2.74500361691176,1.7591609295801,5.04090528557602,2.81287003063364,6.02585329222724,4.54275536589721,0.611036183101898,2.48813941220186,3.79084137650512,13.8891624885073,1.17108398666433,1.83921683546778,1.80062129805349,2.71268672104287,3.06164246180975,2.0498195245576,3.18585863503078,7.76110112217047,2.37124792226126,3.40390944302075,1.93546236580344,0.876782929710299,2.78047249225598,2.78601733217733,1.23469281844766,0.995171334092466,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0.540186184383045,0,0,0,0,1.3413670069981,0.583826711835847,0.658239399653922,0.32833492815819,0.648550476366846,0.730999937126662,0.439100230582101,0.671032093801859,3.36463917702604,0.823236899034275,8.92130714056255,7.40461586657924,1.06644125267617,1.85789337488351,4.63922860759536,4.84040459096022,3.7804267453628,5.51654315726422,5.21981967698963,6.0938613247884,5.27803938480566,8.15721535368718,4.48417400373976,5.39291645192533,5.40345124686736,5.77509692437665,0.948339504765408,1.14248512609729,1.1270773567308,1.01825663922657,1.16371492300575,2.80543279561274,2.71917109634306,3.39503340353085,1.255989822731,1.85095745882701,5.92905254174298,0.333690211432188,0.589676985339609,0.449724224769707,0.202860121388503,1.4470629585145,1.52775511068852,1.43848068725405,0.810676133875177,1.64736847912849,1.43768206527355,1.48856379067401,2.80833905803104,3.53610429125956,3.58794827043824,0.964887042726734,4.24932337383191,0.947457058852424,0.162964976442026,0.339490171550376,0.938760993154008,3.51763140627813,4.04674189506223,5.07347484430277,2.83743259391144,3.76489972402917,2.71073106717728,4.58817281204066,2.07221978239075,4.77341893318988,0,0,12.2941068254759,11.313406598494,7.22477654945064,8.08760637486202,0,1.76729649043061,6.62567260774139,6.24701990874622,6.24727853425117,11.9484398976276,10.4715376818725,11.6061377623421,6.47697122679831,6.42962887404886,5.53402889125133,3.21321316421807,2.83880170416537,1.42452482933804,1.95464351224291,2.96946221350564,15.9294166007955,1.69946445308487,2.11626489875326,4.90373207365335,7.67784921490009,8.9156192903739,6.46070732920553,6.5436071305951,3.92147116223193,8.53299246426703,16.8669773719998,15.470331487228,2.38307724027652,0.36012218806262,0.776152102696527,0.643011105094777,0.886701168211368,1.07021290561242,1.31639216481697,2.74018454203139,1.87737366450968,2.96564899209348,8.82113592219848,4.9465875882444,4.52100394748536,5.36785031860587,6.92359595218192,6.89391778929257,9.32738677215522,9.6421157045465,0,0.412773735926445,0,0.188368457004691,0.27338845544205,0,3.0596117398894,1.39951452323658,1.52019971184866,6.68269432610579,1.10717597753397,1.42323626988794,3.88819226958485,3.97267762427491,5.8957892211468,5.39457385539283,6.28166263512553,7.32916637555283,9.98035294346805,13.6694648879124,0.56369293868419,1.19613236835183,0.165458490457098,0.972255941720238,0,0.337912250981556,0.704143431874524,2.73429208172295,4.08951443260272,1.20792060413003,1.44015003128933,0.632022241256357,1.21635129174099,1.02710957164827,0.25984164595559,0.537080087002444,0,0.240390899039938,0.147689527174577,0.605798699688886,0.228620419965,0.604957110821043,0.487289403698762,0.673482891482306,0.350630706544707,7.02864189207155,0.665957860122194,0.538283139656854,0.335769232728157,7.34120457322324,5.2551093126331,8.24182309202693,9.00347192132076,16.551879433167,3.3885110557024,0.920650473014354,2.86447756719698,1.89038500578056,6.16574267793578,3.7769694869485,2.70009000092722,3.15224842256954,1.35942722695261,4.65984280576638,0.93408612825759,1.99512436700516,2.04880326904961,1.21553358534147,1.67690530102386,2.38996560985018,2.66696073361938,3.91466608753899,3.85103051510178,4.54854981174835,4.56262739802432,2.45214243801899,2.62196220915671,3.52138338226781,2.64203157195821,3.81034953026459,4.05595140806994,3.6652751888104,2.47251540481984,3.23837624295674,2.74295401908332,2.30718548007139,2.62279808942053,3.0522747492789,3.3879376949519,2.70766745253365,2.74391959309159,2.89376682581627,2.44447404922551,2.24456908663095,3.44041552560105,3.64466584789585,2.86461730218783,2.63392630016142,3.2794123866794,1.99848462350357,2.8071793013449,4.08255002691767,2.10417165275728,3.97064554415128,1.15933917810211 | |||
|short_description=p2@Epb4.1l4b | |||
}} | |||
Revision as of 05:15, 14 September 2013
| Short description: | p2@Epb4.1l4b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Epb4.1l4b_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -241bp_to_ENSMUST00000030142, ENSMUST00000095076_5end |
| EntrezGene: | Epb4.1l4b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestine | 2.49e-12 | 31 |
| adult organism | 7.57e-10 | 51 |
| gastrointestinal system | 2.03e-09 | 47 |
| mucosa | 1.67e-08 | 15 |
| intestinal mucosa | 2.84e-08 | 13 |
| wall of intestine | 2.84e-08 | 13 |
| gastrointestinal system mucosa | 2.84e-08 | 13 |
| simple columnar epithelium | 3.22e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
