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FFCP PHASE1:Mm9::chr9:21420610..21420621,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20586|HGNC=|UniProt=Q3TKT4,Q3URH5|association_with_transcript=0bp_to_ENSMUST00000034707,ENSMUST00000098946,ENSMUST00000098948,NM_001174078,NM_001174079,NM_011417,uc009omd.2,uc009ome.2,uc012gph.1_5end|description=CAGE_peak_5_at_Smarca4_5end|id=chr9:21420610..21420621,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004921!9.20e-12!126;UBERON:0004185!9.20e-12!126;UBERON:0004119!1.16e-11!130;UBERON:0000925!1.16e-11!130;UBERON:0006595!1.16e-11!130;UBERON:0001007!1.40e-11!128;UBERON:0001555!1.40e-11!128;UBERON:0007026!1.40e-11!128;UBERON:0002405!4.65e-10!70;UBERON:0003929!1.74e-09!55;UBERON:0002390!8.64e-09!45;UBERON:0003061!8.64e-09!45;UBERON:0002193!8.92e-09!48;UBERON:0005409!1.04e-07!59;UBERON:0005057!2.33e-07!51;UBERON:0000160!4.35e-07!43;UBERON:0005911!7.80e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0004921,6.92e-12,114;UBERON:0004119,9.56e-12,118;UBERON:0000925,9.56e-12,118;UBERON:0006595,9.56e-12,118;UBERON:0001007,1.12e-11,116;UBERON:0001555,1.12e-11,116;UBERON:0007026,1.12e-11,116;UBERON:0003929,7.77e-10,55;UBERON:0002390,3.95e-09,45;UBERON:0003061,3.95e-09,45;UBERON:0002193,4.16e-09,48;UBERON:0002405,4.16e-09,48;UBERON:0005409,3.97e-08,47;UBERON:0000160,6.58e-08,31;UBERON:0000077,8.00e-08,35;UBERON:0005911,4.09e-07,69|phase1_expression=1.28119077683835,4.88565570695105,2.27499619694768,5.74682001482977,5.00895729946347,3.86122325397347,3.73780224952841,4.13194635013044,2.956563165185,4.68129052643987,1.88339765048055,2.71225340584144,6.33442700745461,4.37102012094987,2.33176833270964,3.64455481301687,2.09868563438444,5.36285681109004,4.11343300817216,2.54633791078818,2.72138528483423,0.794327609607082,0.522399578277871,2.07990149631429,1.60586496747019,2.29692785646008,3.01533397311352,3.01659725760245,3.04037471130198,3.02436155711917,1.77384408524244,0.635030673459631,1.84519436275371,0,2.59966457776147,4.15586613396231,4.08338712524738,2.92972141515835,1.5626706890476,1.0470474879476,1.76469446409304,4.78131839470912,2.91306211818692,0.125896817975577,1.01376931219515,1.28482726513177,1.56478268869608,1.09012578190223,1.5378032791413,2.13872888981712,1.25987779462826,0,7.3824346665404,8.70434570413613,7.05796978199174,2.05807548828758,0.573066879877513,1.54701627683233,1.01158230429799,0.528990979272033,1.90149421051854,0.338844532069132,3.55717918444456,4.04954872776629,2.96659908770092,4.9733608046227,1.79760066311043,0.384218305321555,0.829516898467821,1.62007125998029,0.420649922702764,0.856952953211411,1.10434270475807,0.489963196859816,0.766763768145891,0,0,2.68143409978894,1.99688493233117,1.05509030184155,1.18933936683133,1.04182674111352,1.3959149950069,1.68828783009504,2.13917546887534,0.294628585473668,0.854230084794618,0.559198337475902,2.04460721999597,3.02286240427142,2.31891590961342,3.44169550792555,2.03991400112325,2.15881276655127,2.59910566979068,3.13618820968135,2.94933282276679,0.852151612890289,0.519572009205738,2.12003744706204,0,0,2.54805239706646,0,1.29894624606728,0.760079596425296,0.505524445014783,2.39786147410026,3.6251303710604,2.22663208597237,1.04091196059682,0.608930956624282,2.99800146432876,1.50722640552623,1.64624189989987,3.01599819191221,2.47194967734374,2.31358971071859,8.84610551949874,1.61766849947409,4.19598885074748,0.969750506270444,5.59175283654366,1.17112318804619,1.8850203613211,4.08731288333746,3.23500836165985,2.39961092397363,3.43089613097275,2.39665023047716,0.457500602818626,0.879580464790051,1.56441888173049,1.79000820131231,1.87009240103604,2.59586020908412,1.32391173005411,2.11491850037158,2.77995034277042,5.47148825304832,0.780722657776222,0.229902104433473,0.900310649026746,0.452114453507145,1.49680298132921,0.896796041993948,0.468508622798644,1.81092359517311,1.72454394346274,0.756424320671277,1.58356011747554,1.09597866213787,0.278047249225598,2.78601733217733,1.85203922767149,0.796137067273973,2.80885274925294,3.08817488537658,1.98914449576915,1.65700618028402,1.17263029990548,1.80062061461015,2.60419209143731,1.96764231747404,1.23413690309903,1.39520366850245,1.87791380979733,2.45207218971056,1.6455984991348,1.80584210487005,2.1888578577381,2.04679982395465,1.75640092232841,2.95254121272818,2.10289948564127,0.823236899034275,3.63460661282178,1.85115396664481,2.13288250535234,1.39342003116263,1.54640953586512,3.02525286935014,2.2237804384487,2.66315876557583,3.79623249235609,3.12928013975621,2.76468729680296,2.18852119245266,2.33956904542944,8.08937467788799,2.37751854862164,4.77939055810481,0.948339504765408,0.685491075658373,1.1270773567308,1.4255592949172,1.35766741017338,1.1221731182451,1.96033265085198,2.21415221969403,2.35498091762062,1.85095745882701,2.37162101669719,3.00321190288969,3.14494392181125,3.59779379815766,4.66578279193557,2.65294875727659,1.2731292589071,4.31544206176216,1.29708181420028,1.64736847912849,1.43768206527355,1.86070473834252,0.312037673114561,1.76805214562978,3.9467430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|EntrezGene=20586
|HGNC=
|UniProt=Q3TKT4,Q3URH5
|association_with_transcript=0bp_to_ENSMUST00000034707,ENSMUST00000098946,ENSMUST00000098948,NM_001174078,NM_001174079,NM_011417,uc009omd.2,uc009ome.2,uc012gph.1_5end
|description=CAGE_peak_5_at_Smarca4_5end
|id=chr9:21420610..21420621,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004921!9.20e-12!126;UBERON:0004185!9.20e-12!126;UBERON:0004119!1.16e-11!130;UBERON:0000925!1.16e-11!130;UBERON:0006595!1.16e-11!130;UBERON:0001007!1.40e-11!128;UBERON:0001555!1.40e-11!128;UBERON:0007026!1.40e-11!128;UBERON:0002405!4.65e-10!70;UBERON:0003929!1.74e-09!55;UBERON:0002390!8.64e-09!45;UBERON:0003061!8.64e-09!45;UBERON:0002193!8.92e-09!48;UBERON:0005409!1.04e-07!59;UBERON:0005057!2.33e-07!51;UBERON:0000160!4.35e-07!43;UBERON:0005911!7.80e-07!69
|ontology_enrichment_uberon_v019_2=UBERON:0004921,6.92e-12,114;UBERON:0004119,9.56e-12,118;UBERON:0000925,9.56e-12,118;UBERON:0006595,9.56e-12,118;UBERON:0001007,1.12e-11,116;UBERON:0001555,1.12e-11,116;UBERON:0007026,1.12e-11,116;UBERON:0003929,7.77e-10,55;UBERON:0002390,3.95e-09,45;UBERON:0003061,3.95e-09,45;UBERON:0002193,4.16e-09,48;UBERON:0002405,4.16e-09,48;UBERON:0005409,3.97e-08,47;UBERON:0000160,6.58e-08,31;UBERON:0000077,8.00e-08,35;UBERON:0005911,4.09e-07,69
|phase1_expression=1.28119077683835,4.88565570695105,2.27499619694768,5.74682001482977,5.00895729946347,3.86122325397347,3.73780224952841,4.13194635013044,2.956563165185,4.68129052643987,1.88339765048055,2.71225340584144,6.33442700745461,4.37102012094987,2.33176833270964,3.64455481301687,2.09868563438444,5.36285681109004,4.11343300817216,2.54633791078818,2.72138528483423,0.794327609607082,0.522399578277871,2.07990149631429,1.60586496747019,2.29692785646008,3.01533397311352,3.01659725760245,3.04037471130198,3.02436155711917,1.77384408524244,0.635030673459631,1.84519436275371,0,2.59966457776147,4.15586613396231,4.08338712524738,2.92972141515835,1.5626706890476,1.0470474879476,1.76469446409304,4.78131839470912,2.91306211818692,0.125896817975577,1.01376931219515,1.28482726513177,1.56478268869608,1.09012578190223,1.5378032791413,2.13872888981712,1.25987779462826,0,7.3824346665404,8.70434570413613,7.05796978199174,2.05807548828758,0.573066879877513,1.54701627683233,1.01158230429799,0.528990979272033,1.90149421051854,0.338844532069132,3.55717918444456,4.04954872776629,2.96659908770092,4.9733608046227,1.79760066311043,0.384218305321555,0.829516898467821,1.62007125998029,0.420649922702764,0.856952953211411,1.10434270475807,0.489963196859816,0.766763768145891,0,0,2.68143409978894,1.99688493233117,1.05509030184155,1.18933936683133,1.04182674111352,1.3959149950069,1.68828783009504,2.13917546887534,0.294628585473668,0.854230084794618,0.559198337475902,2.04460721999597,3.02286240427142,2.31891590961342,3.44169550792555,2.03991400112325,2.15881276655127,2.59910566979068,3.13618820968135,2.94933282276679,0.852151612890289,0.519572009205738,2.12003744706204,0,0,2.54805239706646,0,1.29894624606728,0.760079596425296,0.505524445014783,2.39786147410026,3.6251303710604,2.22663208597237,1.04091196059682,0.608930956624282,2.99800146432876,1.50722640552623,1.64624189989987,3.01599819191221,2.47194967734374,2.31358971071859,8.84610551949874,1.61766849947409,4.19598885074748,0.969750506270444,5.59175283654366,1.17112318804619,1.8850203613211,4.08731288333746,3.23500836165985,2.39961092397363,3.43089613097275,2.39665023047716,0.457500602818626,0.879580464790051,1.56441888173049,1.79000820131231,1.87009240103604,2.59586020908412,1.32391173005411,2.11491850037158,2.77995034277042,5.47148825304832,0.780722657776222,0.229902104433473,0.900310649026746,0.452114453507145,1.49680298132921,0.896796041993948,0.468508622798644,1.81092359517311,1.72454394346274,0.756424320671277,1.58356011747554,1.09597866213787,0.278047249225598,2.78601733217733,1.85203922767149,0.796137067273973,2.80885274925294,3.08817488537658,1.98914449576915,1.65700618028402,1.17263029990548,1.80062061461015,2.60419209143731,1.96764231747404,1.23413690309903,1.39520366850245,1.87791380979733,2.45207218971056,1.6455984991348,1.80584210487005,2.1888578577381,2.04679982395465,1.75640092232841,2.95254121272818,2.10289948564127,0.823236899034275,3.63460661282178,1.85115396664481,2.13288250535234,1.39342003116263,1.54640953586512,3.02525286935014,2.2237804384487,2.66315876557583,3.79623249235609,3.12928013975621,2.76468729680296,2.18852119245266,2.33956904542944,8.08937467788799,2.37751854862164,4.77939055810481,0.948339504765408,0.685491075658373,1.1270773567308,1.4255592949172,1.35766741017338,1.1221731182451,1.96033265085198,2.21415221969403,2.35498091762062,1.85095745882701,2.37162101669719,3.00321190288969,3.14494392181125,3.59779379815766,4.66578279193557,2.65294875727659,1.2731292589071,4.31544206176216,1.29708181420028,1.64736847912849,1.43768206527355,1.86070473834252,0.312037673114561,1.76805214562978,3.94674309748207,3.85954817090694,2.21703828199926,1.70542270593436,1.79261474086228,1.18821560042632,0,0.837531287209079,3.09456733151818,1.36593553500459,1.57635144106191,1.32878813789265,1.91345722388985,2.13022309130459,2.59027472798843,1.3018415272336,3.01582567878545,3.26343410291226,2.95058563811422,2.48343071674259,3.37156238974363,1.40654023910644,0.819674726883377,2.7771801992481,0.315508219416257,1.17131623288992,1.50796378412959,0.238968797952552,0.222798674082394,1.69845918473299,0.404810701674894,0.584511715822624,1.18586333383957,0.963963949265421,2.98074178937364,0.534196811001766,0.81443479676788,2.96946221350564,6.63725691699814,1.21390318077491,0.604647113929502,1.69744571780308,2.95301892880773,2.45948118355142,2.32585463851399,1.09060118843252,2.85197902707777,3.47640433729398,1.05418608574999,3.09406629744561,2.38307724027652,0.36012218806262,1.03486947026204,0.643011105094777,1.41872186913819,1.24858172321449,0.987294123612726,0.304464949114599,3.52007562095566,1.27099242518292,3.52845436887939,4.122156323537,2.42196640043858,2.47282992205439,1.79058516004705,2.1338316966858,4.37221254944776,2.41052892613663,4.44264290074417,2.27025554759545,2.22233432843654,2.26042148405629,5.87785179200408,4.11800711771741,2.88963330989554,3.35883485576779,3.31679937130617,1.90934123603023,1.73984796469624,2.23651413839534,1.62008011232702,1.88179466413022,1.09181281873089,2.29269388854195,2.14898984885873,2.6175594198403,2.46268449254406,1.86401793926078,2.81846469342095,1.49516546043979,1.15820943319968,0.972255941720238,0.904118764344118,1.18269287843545,1.05621514781179,2.0832701575032,1.36317147753424,3.38217769156408,2.30424005006292,2.52808896502543,1.62180172232131,1.84879722896689,3.24802057444488,2.8644271306797,4.96703386953162,4.80781798079875,4.13530676088816,3.73575864808146,2.59103142626999,3.93222122033678,5.36018344068638,4.32953287381483,3.27255326108393,3.17422537061296,2.44184548711471,0.807424709485281,2.18250001273302,4.44336066274038,2.62755465631655,2.56412273974171,4.28736758158132,5.01572104035363,0.564751842617067,1.38097570952153,3.43737308063638,1.03111909406213,2.05524755931193,3.0215755895588,1.35004500046361,1.35096360967266,1.81256963593682,0.51776031175182,0.726511433089237,1.19707462020309,0.682934423016537,1.21553358534147,0.628839487883947,0.735374033800057,1.77797382241292,0.824140228955577,0.320919209591815,1.51618327058278,1.2673964994512,2.45214243801899,1.591905626988,2.17685518176556,2.52716063404698,1.42888107384922,2.0859178670074,2.31491064556446,1.23625770240992,2.64958056241915,0.685738504770831,2.12970967391205,1.66905332963125,0.726732083161643,1.2234219453993,1.35383372626682,1.46342378298218,2.10455769150274,1.08643291076689,1.68342681497322,2.01679530811096,2.56111654176465,2.04615521584845,2.16911577660352,2.12197272079256,2.24829520144151,3.50897412668113,2.14871054048298,1.14772999241306,2.20591419119516,2.08681052058379
|short_description=p5@Smarca4
}}

Revision as of 17:26, 14 September 2013

Short description:p5@Smarca4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Smarca4_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000034707, ENSMUST00000098946, ENSMUST00000098948, NM_001174078, NM_001174079, NM_011417, uc009omd.2, uc009ome.2, uc012gph.1_5end
EntrezGene:Smarca4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Smarca4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.75
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.71
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.33
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.37
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.36
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.38
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D92.04
Mouse Schwann, donor2.CNhs12573.11746-123F93.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I33.02
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.43
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G45.47
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.45
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G12.19
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D22.95
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H43.03
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G14.78
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D51.96
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F83.00
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D74.67
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C34.12
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H32.47
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G24.44
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H15.88
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.32
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A92.15
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.85
thymus, embryo E16.CNhs11002.456-26C53.25
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G44.97
thymus, neonate N02.CNhs11181.1541-43F84.81
thymus, neonate N03.CNhs11137.2104-43C74.14
thymus, neonate N06.CNhs11197.681-26C43.74
thymus, neonate N07.CNhs11211.713-19D32.59
thymus, neonate N10.CNhs11194.748-24E43.93
thymus, neonate N20.CNhs11186.820-7A25.36
thymus, neonate N25.CNhs11125.1362-25G74.33
thymus, neonate N30.CNhs11132.1393-42G23.27
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E44.44
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D54.29
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B42.09





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
subdivision of digestive tract6.92e-12114
endoderm-derived structure9.56e-12118
endoderm9.56e-12118
presumptive endoderm9.56e-12118
digestive system1.12e-11116
digestive tract1.12e-11116
primitive gut1.12e-11116
gut epithelium7.77e-1055
hematopoietic system3.95e-0945
blood island3.95e-0945
hemolymphoid system4.16e-0948
immune system4.16e-0948
gastrointestinal system3.97e-0847
intestine6.58e-0831
mixed endoderm/mesoderm-derived structure8.00e-0835
endo-epithelium4.09e-0769







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