FFCP PHASE1:Mm9::chr8:113605755..113605771,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=353287|HGNC=|MCL_coexpression_id=418|UniProt=Q7TSQ1|association_with_transcript=-147bp_to_NM_181549,uc012gkt.1_5end|description=CAGE_peak_4_at_Clec18a_5end|id=chr8:113605755..113605771,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002605,1.72e-16,2;CL:0002604,1.72e-16,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!3.78e-12!14;UBERON:0003918!3.78e-12!14;UBERON:0005095!3.78e-12!14;UBERON:0007687!3.78e-12!14;UBERON:0000970!4.71e-11!9;UBERON:0000019!4.71e-11!9;UBERON:0000047!4.71e-11!9;UBERON:0004088!4.71e-11!9;UBERON:0002104!4.71e-11!9;UBERON:0001456!4.71e-11!9;UBERON:0003072!4.71e-11!9;UBERON:0003071!4.71e-11!9;UBERON:0004128!4.71e-11!9;UBERON:0006554!2.63e-10!16;UBERON:0000020!5.26e-10!12;UBERON:0001032!5.26e-10!12;UBERON:0004456!5.26e-10!12;UBERON:0001008!1.50e-09!17;UBERON:0005085!4.37e-09!13;UBERON:0001444!9.48e-09!11;UBERON:0000489!2.93e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.32e-28,14;UBERON:0003918,4.32e-28,14;UBERON:0011143,4.32e-28,14;UBERON:0005095,4.32e-28,14;UBERON:0007687,4.32e-28,14;UBERON:0006554,8.38e-22,18;UBERON:0001008,1.21e-20,19;UBERON:0000489,1.18e-18,21;UBERON:0003103,6.29e-09,43;UBERON:0005172,8.83e-08,49;UBERON:0005173,8.83e-08,49;UBERON:0002417,8.83e-08,49;UBERON:0000916,8.83e-08,49|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,2.63623419281366,2.13872888981712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.461230994512117,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,2.86264974517948,1.14951052216736,0.540186389416048,0.30140963567143,0.204109497453984,0.512454881139399,0.468508622798644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03468641524931,3.31320686568214,2.25415471346161,5.7022371796688,7.95205197387266,8.13575510727695,5.69128834118316,0.738050739898011,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0.377252682772152,0.37456602987953,0.512201219238954,0.114870937911227,0.476293691283074,0.579421629724277,0,0.824171801606613,0.588795680537589,0,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0,0.409231043169689,0.464810523557898,0,0,0,0.214871054048298,0,0,0|short_description=p4@Clec18a}} | ||
|EntrezGene=353287 | |||
|HGNC= | |||
|MCL_coexpression_id=418 | |||
|UniProt=Q7TSQ1 | |||
|association_with_transcript=-147bp_to_NM_181549,uc012gkt.1_5end | |||
|description=CAGE_peak_4_at_Clec18a_5end | |||
|id=chr8:113605755..113605771,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.72e-16,2;CL:0002604,1.72e-16,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!3.78e-12!14;UBERON:0003918!3.78e-12!14;UBERON:0005095!3.78e-12!14;UBERON:0007687!3.78e-12!14;UBERON:0000970!4.71e-11!9;UBERON:0000019!4.71e-11!9;UBERON:0000047!4.71e-11!9;UBERON:0004088!4.71e-11!9;UBERON:0002104!4.71e-11!9;UBERON:0001456!4.71e-11!9;UBERON:0003072!4.71e-11!9;UBERON:0003071!4.71e-11!9;UBERON:0004128!4.71e-11!9;UBERON:0006554!2.63e-10!16;UBERON:0000020!5.26e-10!12;UBERON:0001032!5.26e-10!12;UBERON:0004456!5.26e-10!12;UBERON:0001008!1.50e-09!17;UBERON:0005085!4.37e-09!13;UBERON:0001444!9.48e-09!11;UBERON:0000489!2.93e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.32e-28,14;UBERON:0003918,4.32e-28,14;UBERON:0011143,4.32e-28,14;UBERON:0005095,4.32e-28,14;UBERON:0007687,4.32e-28,14;UBERON:0006554,8.38e-22,18;UBERON:0001008,1.21e-20,19;UBERON:0000489,1.18e-18,21;UBERON:0003103,6.29e-09,43;UBERON:0005172,8.83e-08,49;UBERON:0005173,8.83e-08,49;UBERON:0002417,8.83e-08,49;UBERON:0000916,8.83e-08,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,2.63623419281366,2.13872888981712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.461230994512117,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,2.86264974517948,1.14951052216736,0.540186389416048,0.30140963567143,0.204109497453984,0.512454881139399,0.468508622798644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03468641524931,3.31320686568214,2.25415471346161,5.7022371796688,7.95205197387266,8.13575510727695,5.69128834118316,0.738050739898011,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0.377252682772152,0.37456602987953,0.512201219238954,0.114870937911227,0.476293691283074,0.579421629724277,0,0.824171801606613,0.588795680537589,0,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0,0.409231043169689,0.464810523557898,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p4@Clec18a | |||
}} |
Revision as of 14:46, 14 September 2013
Short description: | p4@Clec18a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Clec18a_5end |
Coexpression cluster: | MCL_coexpression_mm9:418 |
Association with transcript: | -147bp_to_NM_181549, uc012gkt.1_5end |
EntrezGene: | Clec18a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.72e-16 | 2 |
astrocyte of the hippocampus | 1.72e-16 | 2 |
Ontology term | p-value | n |
---|---|---|
kidney | 4.32e-28 | 14 |
kidney mesenchyme | 4.32e-28 | 14 |
upper urinary tract | 4.32e-28 | 14 |
kidney rudiment | 4.32e-28 | 14 |
kidney field | 4.32e-28 | 14 |
urinary system structure | 8.38e-22 | 18 |
renal system | 1.21e-20 | 19 |
cavitated compound organ | 1.18e-18 | 21 |
compound organ | 6.29e-09 | 43 |
abdomen element | 8.83e-08 | 49 |
abdominal segment element | 8.83e-08 | 49 |
abdominal segment of trunk | 8.83e-08 | 49 |
abdomen | 8.83e-08 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.